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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:bpsd03030]
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03410 Base excision repair [PATH:bpsd03410]
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03420 Nucleotide excision repair [PATH:bpsd03420]
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03430 Mismatch repair [PATH:bpsd03430]
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03440 Homologous recombination [PATH:bpsd03440]
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 BBX_1611 recJ; single-stranded-DNA-specific exonuclease RecJ
BBX_3378 ssb; single-stranded DNA-binding protein
BBX_1415 recO; DNA repair protein RecO
BBX_1981 recR; recombination protein RecR
BBX_3198 recA; protein RecA
BBX_4335 polA; DNA polymerase I family protein
BBX_942 ruvA; Holliday junction DNA helicase RuvA
BBX_941 ruvB; Holliday junction DNA helicase RuvB
BBX_943 ruvC; crossover junction endodeoxyribonuclease RuvC
BBX_975 recG; ATP-dependent DNA helicase RecG
BBX_2679 recB; exodeoxyribonuclease V, beta subunit
BBX_2680 recC; exodeoxyribonuclease V, gamma subunit
BBX_2678 recD; exodeoxyribonuclease V, alpha subunit
BBX_2856 dnaE; DNA polymerase III, alpha subunit
BBX_259 dnaN; DNA polymerase III, beta subunit
BBX_1978 dnaX; DNA polymerase III, subunit gamma and tau
BBX_901 holA; DNA polymerase III, delta subunit
BBX_1917 holB; DNA polymerase III, delta' subunit
BBX_1278 exonuclease, DNA polymerase III, epsilon subunit family domain protein
BBX_2615 dnaQ; DNA polymerase III, epsilon subunit
BBX_3015 DNA polymerase III chi subunit, HolC family protein
BBX_379 priA; primosomal protein N'
BBX_1940 putative primosomal replication protein n
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
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03450 Non-homologous end-joining [PATH:bpsd03450]
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:bpsd03000]
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03021 Transcription machinery [BR:bpsd03021]
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03019 Messenger RNA biogenesis [BR:bpsd03019]
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03041 Spliceosome
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03011 Ribosome [BR:bpsd03011]
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03009 Ribosome biogenesis [BR:bpsd03009]
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03016 Transfer RNA biogenesis [BR:bpsd03016]
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03012 Translation factors [BR:bpsd03012]
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03110 Chaperones and folding catalysts [BR:bpsd03110]
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04131 Membrane trafficking [BR:bpsd04131]
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04121 Ubiquitin system
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03051 Proteasome [BR:bpsd03051]
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03032 DNA replication proteins [BR:bpsd03032]
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03036 Chromosome and associated proteins [BR:bpsd03036]
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03400 DNA repair and recombination proteins [BR:bpsd03400]
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BBX_3111 methylated-DNA-[]-cysteine S-methyltransferase family protein
BBX_1541 FAD binding domain of DNA photolyase family protein
BBX_757 ung; uracil-DNA glycosylase
BBX_3399 mutY; A/G-specific adenine glycosylase
BBX_2875 nth; endonuclease III
BBX_5984 DEAD_2 family protein
BBX_805 NUDIX domain protein
BBX_6237 NUDIX domain protein
BBX_3067 dut; dUTP diphosphatase family protein
BBX_237 ada; bifunctional transcriptional activator/DNA repair enzyme Ada
BBX_4875 uracil-DNA glycosylase, 4 family protein
BBX_1766 uracil-DNA glycosylase, 4 family protein
BBX_236 alkA N-terminal domain protein
BBX_1702 hhH-GPD superbase excision DNA repair family protein
BBX_450 methyladenine glycosylase family protein
BBX_3400 mutM; formamidopyrimidine-DNA glycosylase
BBX_192 xth; exodeoxyribonuclease III
BBX_1575 xth; exodeoxyribonuclease III
BBX_1611 recJ; single-stranded-DNA-specific exonuclease RecJ
BBX_1784 ligA; DNA ligase, NAD-dependent
BBX_4335 polA; DNA polymerase I family protein
BBX_3380 uvrA; excinuclease ABC subunit A
BBX_5062 uvrA; excinuclease ABC subunit A
BBX_5433 uvrB; excinuclease ABC subunit B
BBX_1422 uvrC; excinuclease ABC subunit C
BBX_2454 uvrD/REP helicase N-terminal domain protein
BBX_567 rpoB; DNA-directed RNA polymerase, beta subunit
BBX_568 rpoC; DNA-directed RNA polymerase, beta' subunit
BBX_602 rpoA; DNA-directed RNA polymerase, alpha subunit
BBX_1269 rpoZ; DNA-directed RNA polymerase, omega subunit
BBX_1851 mfd; transcription-repair coupling factor
BBX_1638 mutS; DNA mismatch repair protein MutS
BBX_1029 mutL; DNA mismatch repair MutL family protein
BBX_3094 xseA; exodeoxyribonuclease VII, large subunit
BBX_4329 xseB; exodeoxyribonuclease VII, small subunit
BBX_2856 dnaE; DNA polymerase III, alpha subunit
BBX_259 dnaN; DNA polymerase III, beta subunit
BBX_3015 DNA polymerase III chi subunit, HolC family protein
BBX_901 holA; DNA polymerase III, delta subunit
BBX_1917 holB; DNA polymerase III, delta' subunit
BBX_1278 exonuclease, DNA polymerase III, epsilon subunit family domain protein
BBX_2615 dnaQ; DNA polymerase III, epsilon subunit
BBX_1978 dnaX; DNA polymerase III, subunit gamma and tau
BBX_3378 ssb; single-stranded DNA-binding protein
BBX_1682 D12 class N6 adenine-specific DNA methyltransferase family protein
BBX_1467 D12 class N6 adenine-specific DNA methyltransferase family protein
BBX_2679 recB; exodeoxyribonuclease V, beta subunit
BBX_2680 recC; exodeoxyribonuclease V, gamma subunit
BBX_2678 recD; exodeoxyribonuclease V, alpha subunit
BBX_3198 recA; protein RecA
BBX_942 ruvA; Holliday junction DNA helicase RuvA
BBX_941 ruvB; Holliday junction DNA helicase RuvB
BBX_943 ruvC; crossover junction endodeoxyribonuclease RuvC
BBX_379 priA; primosomal protein N'
BBX_1940 putative primosomal replication protein n
BBX_1771 radA; DNA repair protein RadA
BBX_975 recG; ATP-dependent DNA helicase RecG
BBX_1415 recO; DNA repair protein RecO
BBX_1981 recR; recombination protein RecR
BBX_1010 recN; DNA repair protein RecN
BBX_4851 Ku protein
BBX_4850 ligD; DNA ligase D
BBX_1316 gyrA; DNA gyrase, A subunit
BBX_260 gyrB; DNA gyrase, B subunit
BBX_332 hupB; DNA-binding protein HU-beta
BBX_945 bacterial regulatory , Fis family protein
BBX_2412 ihfA; integration host factor, alpha subunit
BBX_1323 ihfB; integration host factor, beta subunit
BBX_570 recQ; ATP-dependent DNA helicase RecQ
BBX_6219 H-NS histone family protein
BBX_2117 H-NS histone family protein
BBX_2509 H-NS histone family protein
BBX_2537 H-NS histone family protein
BBX_5065 H-NS histone family protein
BBX_5918 H-NS histone family protein
BBX_454 H-NS histone family protein
BBX_486 H-NS histone family protein
BBX_5974 H-NS histone family protein
BBX_4763 H-NS histone family protein
BBX_5182 H-NS histone family protein
BBX_4001 H-NS histone family protein
BBX_1585 impB/mucB/samB C-terminal family protein
BBX_2306 lexA; repressor LexA
BBX_3458 putative cell division inhibitor protein
BBX_3457 impB/mucB/samB family protein
BBX_3456 dnaE; DNA polymerase III, alpha subunit
BBX_3197 recX family protein
BBX_5517 PHP domain protein
BBX_415 uvrD/REP helicase N-terminal domain protein
BBX_2013 DEAD_2 family protein
BBX_3751 DEAD/H associated family protein
BBX_4925 ribonucleotide reductase, barrel domain protein
BBX_5543 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
BBX_844 ribonucleoside-diphosphate reductase, alpha subunit
BBX_845 ribonucleotide reductase, small chain family protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04485 radA; DNA repair protein RadA/Sms
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03530 hupB; DNA-binding protein HU-beta
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14160 imuA; protein ImuA
K14161 imuB; protein ImuB
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03565 recX; regulatory protein
K02347 polX; DNA polymerase (family X)
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:bpsd03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Burkholderia pseudomallei MSHR520