Messenger RNA Biogenesis - Coccidioides posadasii

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     KO
 Eukaryotic type
   mRNA processing factors
   mRNA surveillance and transport factors
     Transport factors
       EJC complex
       TREX complex
       TREX-2 complex
       Nuclear pore complex
       Ran-mediated transport factors
       eIF4F and regulatory proteins
         CPC735_030150 Eukaryotic initiation factor 4E family protein
         CPC735_021100 eukaryotic translation initiation factor 4E-1, putative
         CPC735_043410 Eukaryotic translation initiation factor 4A, putative
         CPC735_041570 MIF4G domain containing protein
         CPC735_018550 RNA recognition motif containing protein
         CPC735_019090 ATP-dependent RNA helicase, putative
         CPC735_058540 ATP-dependent RNA helicase ded1, putative
         CPC735_068290 GYF domain containing protein
         CPC735_068930 Poly-binding protein FabM, putative
         CPC735_073200 DEAD/DEAH box helicase domain containing protein
         CPC735_064100 activating signal cointegrator 1 complex subunit, putative
         CPC735_013570 PUA domain containing protein
         CPC735_039570 Translation initiation factor SUI1 family protein
K03259 EIF4E; translation initiation factor 4E 
K03259 EIF4E; translation initiation factor 4E 
K03257 EIF4A; translation initiation factor 4A 
K03260 EIF4G; translation initiation factor 4G 
K03258 EIF4B; translation initiation factor 4B 
K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
K13126 PABPC; polyadenylate-binding protein 
K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] 
K18664 SLH1; antiviral helicase SLH1 [EC:5.6.2.6] 
K07575 MCTS; malignant T-cell-amplified sequence 
K24272 DENR; density-regulated protein 
       APOBEC1-ACF complex
       Other transport factors
     Surveillance factors
     Factors involved in mRNA localization
     mRNA cycle factors
       Common to processing body (P body) and stress granule
         CPC735_029930 exonuclease, putative
         CPC735_005190 Piwi domain containing protein
         CPC735_010790 Piwi domain containing protein
         CPC735_030150 Eukaryotic initiation factor 4E family protein
         CPC735_021100 eukaryotic translation initiation factor 4E-1, putative
         CPC735_032380 nonsense transcript regulator, putative
         CPC735_019090 ATP-dependent RNA helicase, putative
         CPC735_058540 ATP-dependent RNA helicase ded1, putative
         CPC735_044850 ATP-dependent RNA helicase, putative
         CPC735_032940 sum2 protein, putative
         CPC735_067300 hypothetical protein
         CPC735_010650 HEAT repeat containing protein
         CPC735_065510 cAMP-dependent protein kinase type 2, putative
         CPC735_032030 kinase domain containing protein
         CPC735_013530 La domain containing protein
K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K03259 EIF4E; translation initiation factor 4E 
K03259 EIF4E; translation initiation factor 4E 
K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
K18749 LSM14; protein LSM14 
K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
K18752 TNPO1; transportin-1 
K04345 PKA; protein kinase A [EC:2.7.11.11] 
K04345 PKA; protein kinase A [EC:2.7.11.11] 
K18757 LARP1; la-related protein 1 
       P-body specific factors
       Stress granule specific factors
   mRNA degradation factors
 
 Prokaryotic type

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Last updated: April 9, 2024