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KO |
09100 Metabolism
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09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:cyn03030]
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03410 Base excision repair [PATH:cyn03410]
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03420 Nucleotide excision repair [PATH:cyn03420]
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03430 Mismatch repair [PATH:cyn03430]
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03440 Homologous recombination [PATH:cyn03440]
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Cyan7425_1165 single-stranded-DNA-specific exonuclease RecJ
Cyan7425_4538 single-stranded-DNA-specific exonuclease RecJ
Cyan7425_1469 single-strand binding protein
Cyan7425_1502 single-strand binding protein
Cyan7425_4245 single-strand binding protein
Cyan7425_2248 DNA replication and repair protein RecF
Cyan7425_0978 DNA repair protein RecO
Cyan7425_4182 recombination protein RecR
Cyan7425_1671 recA protein
Cyan7425_4681 Holliday junction DNA helicase RuvA
Cyan7425_2503 Holliday junction DNA helicase RuvB
Cyan7425_0918 crossover junction endodeoxyribonuclease RuvC
Cyan7425_4575 ATP-dependent DNA helicase RecG
Cyan7425_0213 helicase, RecD/TraA family
Cyan7425_4334 DNA polymerase III, alpha subunit
Cyan7425_0199 DNA polymerase III, beta subunit
Cyan7425_0431 Hedgehog/intein hint domain protein
Cyan7425_4684 DNA polymerase III, delta subunit
Cyan7425_0993 DNA polymerase III, delta prime subunit
Cyan7425_2432 Exonuclease RNase T and DNA polymerase III
Cyan7425_0567 primosomal protein N'
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:cyn03000]
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03021 Transcription machinery [BR:cyn03021]
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03019 Messenger RNA biogenesis [BR:cyn03019]
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03041 Spliceosome
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03011 Ribosome [BR:cyn03011]
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03009 Ribosome biogenesis [BR:cyn03009]
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03016 Transfer RNA biogenesis [BR:cyn03016]
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03012 Translation factors [BR:cyn03012]
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03110 Chaperones and folding catalysts [BR:cyn03110]
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04131 Membrane trafficking [BR:cyn04131]
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04121 Ubiquitin system [BR:cyn04121]
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03051 Proteasome [BR:cyn03051]
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03032 DNA replication proteins [BR:cyn03032]
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03036 Chromosome and associated proteins [BR:cyn03036]
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03400 DNA repair and recombination proteins [BR:cyn03400]
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Cyan7425_4855 methylated-DNA/protein-cysteine methyltransferase
Cyan7425_0241 Deoxyribodipyrimidine photo-lyase
Cyan7425_0785 DNA-3-methyladenine glycosylase
Cyan7425_4181 A/G-specific adenine glycosylase
Cyan7425_1364 endonuclease III
Cyan7425_1510 NUDIX hydrolase
Cyan7425_2119 NUDIX hydrolase
Cyan7425_3982 deoxyribodipyrimidine photolyase-related protein
Cyan7425_0259 phage SPO1 DNA polymerase-related protein
Cyan7425_0630 DNA-3-methyladenine glycosylase II
Cyan7425_4178 formamidopyrimidine-DNA glycosylase
Cyan7425_4594 exodeoxyribonuclease III Xth
Cyan7425_0246 Deoxyribonuclease V
Cyan7425_1165 single-stranded-DNA-specific exonuclease RecJ
Cyan7425_4538 single-stranded-DNA-specific exonuclease RecJ
Cyan7425_0676 DNA ligase, NAD-dependent
Cyan7425_1015 excinuclease ABC, A subunit
Cyan7425_5213 excinuclease ABC, B subunit
Cyan7425_0381 excinuclease ABC, C subunit
Cyan7425_2302 UvrD/REP helicase
Cyan7425_1513 ATP-dependent DNA helicase PcrA
Cyan7425_4621 UvrD/REP helicase
Cyan7425_4111 UvrD/REP helicase
Cyan7425_0488 DNA-directed RNA polymerase, beta subunit
Cyan7425_0486 DNA-directed RNA polymerase, beta'' subunit
Cyan7425_0487 DNA-directed RNA polymerase, gamma subunit
Cyan7425_1316 DNA-directed RNA polymerase, alpha subunit
Cyan7425_1347 DNA-directed RNA polymerase subunit omega
Cyan7425_1827 transcription-repair coupling factor
Cyan7425_3815 DNA mismatch repair protein MutS
Cyan7425_2750 MutS2 family protein
Cyan7425_3702 DNA mismatch repair protein MutL
Cyan7425_3117 exodeoxyribonuclease VII, large subunit
Cyan7425_3116 Exonuclease VII small subunit
Cyan7425_4334 DNA polymerase III, alpha subunit
Cyan7425_0199 DNA polymerase III, beta subunit
Cyan7425_4684 DNA polymerase III, delta subunit
Cyan7425_0993 DNA polymerase III, delta prime subunit
Cyan7425_2432 Exonuclease RNase T and DNA polymerase III
Cyan7425_0431 Hedgehog/intein hint domain protein
Cyan7425_1469 single-strand binding protein
Cyan7425_1502 single-strand binding protein
Cyan7425_4245 single-strand binding protein
Cyan7425_3706 D12 class N6 adenine-specific DNA methyltransferase
Cyan7425_3837 DNA adenine methylase
Cyan7425_0213 helicase, RecD/TraA family
Cyan7425_1671 recA protein
Cyan7425_4681 Holliday junction DNA helicase RuvA
Cyan7425_2503 Holliday junction DNA helicase RuvB
Cyan7425_0918 crossover junction endodeoxyribonuclease RuvC
Cyan7425_0567 primosomal protein N'
Cyan7425_2343 SMC domain protein
Cyan7425_3541 exonuclease SbcC
Cyan7425_1475 nuclease SbcCD, D subunit
Cyan7425_4367 metallophosphoesterase
Cyan7425_2248 DNA replication and repair protein RecF
Cyan7425_4575 ATP-dependent DNA helicase RecG
Cyan7425_0978 DNA repair protein RecO
Cyan7425_4182 recombination protein RecR
Cyan7425_1274 DNA repair protein RecN
Cyan7425_2462 CRISPR-associated protein Cas1
Cyan7425_0151 CRISPR-associated protein Cas1
Cyan7425_4088 CRISPR-associated protein Cas1
Cyan7425_5340 CRISPR-associated protein Cas1
Cyan7425_1367 DNA gyrase, A subunit
Cyan7425_2787 DNA gyrase, A subunit
Cyan7425_2993 DNA gyrase, B subunit
Cyan7425_1050 DNA topoisomerase I
Cyan7425_3274 DNA topoisomerase I
Cyan7425_2489 histone family protein DNA-binding protein
Cyan7425_2792 ATP-dependent DNA helicase, RecQ family
Cyan7425_4141 ATP-dependent DNA helicase, RecQ family
Cyan7425_1233 SOS-response transcriptional repressor, LexA
Cyan7425_0943 putative ATP-dependent DNA helicase DinG
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K03547 sbcD; DNA repair protein SbcD/Mre11
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K15342 cas1; CRISP-associated protein Cas1
K15342 cas1; CRISP-associated protein Cas1
K15342 cas1; CRISP-associated protein Cas1
K15342 cas1; CRISP-associated protein Cas1
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
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03029 Mitochondrial biogenesis [BR:cyn03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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