KEGG Orthology (KO) - Cyanothece sp. PCC 7425

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
     03030 DNA replication [PATH:cyn03030]
     03410 Base excision repair [PATH:cyn03410]
     03420 Nucleotide excision repair [PATH:cyn03420]
     03430 Mismatch repair [PATH:cyn03430]
     03440 Homologous recombination [PATH:cyn03440]
       Cyan7425_1165 single-stranded-DNA-specific exonuclease RecJ
       Cyan7425_4538 single-stranded-DNA-specific exonuclease RecJ
       Cyan7425_1469 single-strand binding protein
       Cyan7425_1502 single-strand binding protein
       Cyan7425_4245 single-strand binding protein
       Cyan7425_2248 DNA replication and repair protein RecF
       Cyan7425_0978 DNA repair protein RecO
       Cyan7425_4182 recombination protein RecR
       Cyan7425_1671 recA protein
       Cyan7425_4681 Holliday junction DNA helicase RuvA
       Cyan7425_2503 Holliday junction DNA helicase RuvB
       Cyan7425_0918 crossover junction endodeoxyribonuclease RuvC
       Cyan7425_4575 ATP-dependent DNA helicase RecG
       Cyan7425_0213 helicase, RecD/TraA family
       Cyan7425_4334 DNA polymerase III, alpha subunit
       Cyan7425_0199 DNA polymerase III, beta subunit
       Cyan7425_0431 Hedgehog/intein hint domain protein
       Cyan7425_4684 DNA polymerase III, delta subunit
       Cyan7425_0993 DNA polymerase III, delta prime subunit
       Cyan7425_2432 Exonuclease RNase T and DNA polymerase III
       Cyan7425_0567 primosomal protein N'
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
     03450 Non-homologous end-joining
     03460 Fanconi anemia pathway
 
   09126 Chromosome
 
   09125 Information processing in viruses
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:cyn03000]
     03021 Transcription machinery [BR:cyn03021]
     03019 Messenger RNA biogenesis [BR:cyn03019]
     03041 Spliceosome
     03011 Ribosome [BR:cyn03011]
     03009 Ribosome biogenesis [BR:cyn03009]
     03016 Transfer RNA biogenesis [BR:cyn03016]
     03012 Translation factors [BR:cyn03012]
     03110 Chaperones and folding catalysts [BR:cyn03110]
     04131 Membrane trafficking [BR:cyn04131]
     04121 Ubiquitin system [BR:cyn04121]
     03051 Proteasome [BR:cyn03051]
     03032 DNA replication proteins [BR:cyn03032]
     03036 Chromosome and associated proteins [BR:cyn03036]
     03400 DNA repair and recombination proteins [BR:cyn03400]
       Cyan7425_4855 methylated-DNA/protein-cysteine methyltransferase
       Cyan7425_0241 Deoxyribodipyrimidine photo-lyase
       Cyan7425_0785 DNA-3-methyladenine glycosylase
       Cyan7425_4181 A/G-specific adenine glycosylase
       Cyan7425_1364 endonuclease III
       Cyan7425_1510 NUDIX hydrolase
       Cyan7425_2119 NUDIX hydrolase
       Cyan7425_3982 deoxyribodipyrimidine photolyase-related protein
       Cyan7425_0259 phage SPO1 DNA polymerase-related protein
       Cyan7425_0630 DNA-3-methyladenine glycosylase II
       Cyan7425_4178 formamidopyrimidine-DNA glycosylase
       Cyan7425_4594 exodeoxyribonuclease III Xth
       Cyan7425_0246 Deoxyribonuclease V
       Cyan7425_1165 single-stranded-DNA-specific exonuclease RecJ
       Cyan7425_4538 single-stranded-DNA-specific exonuclease RecJ
       Cyan7425_0676 DNA ligase, NAD-dependent
       Cyan7425_1015 excinuclease ABC, A subunit
       Cyan7425_5213 excinuclease ABC, B subunit
       Cyan7425_0381 excinuclease ABC, C subunit
       Cyan7425_2302 UvrD/REP helicase
       Cyan7425_1513 ATP-dependent DNA helicase PcrA
       Cyan7425_4621 UvrD/REP helicase
       Cyan7425_4111 UvrD/REP helicase
       Cyan7425_0488 DNA-directed RNA polymerase, beta subunit
       Cyan7425_0486 DNA-directed RNA polymerase, beta'' subunit
       Cyan7425_0487 DNA-directed RNA polymerase, gamma subunit
       Cyan7425_1316 DNA-directed RNA polymerase, alpha subunit
       Cyan7425_1347 DNA-directed RNA polymerase subunit omega
       Cyan7425_1827 transcription-repair coupling factor
       Cyan7425_3815 DNA mismatch repair protein MutS
       Cyan7425_2750 MutS2 family protein
       Cyan7425_3702 DNA mismatch repair protein MutL
       Cyan7425_3117 exodeoxyribonuclease VII, large subunit
       Cyan7425_3116 Exonuclease VII small subunit
       Cyan7425_4334 DNA polymerase III, alpha subunit
       Cyan7425_0199 DNA polymerase III, beta subunit
       Cyan7425_4684 DNA polymerase III, delta subunit
       Cyan7425_0993 DNA polymerase III, delta prime subunit
       Cyan7425_2432 Exonuclease RNase T and DNA polymerase III
       Cyan7425_0431 Hedgehog/intein hint domain protein
       Cyan7425_1469 single-strand binding protein
       Cyan7425_1502 single-strand binding protein
       Cyan7425_4245 single-strand binding protein
       Cyan7425_3706 D12 class N6 adenine-specific DNA methyltransferase
       Cyan7425_3837 DNA adenine methylase
       Cyan7425_0213 helicase, RecD/TraA family
       Cyan7425_1671 recA protein
       Cyan7425_4681 Holliday junction DNA helicase RuvA
       Cyan7425_2503 Holliday junction DNA helicase RuvB
       Cyan7425_0918 crossover junction endodeoxyribonuclease RuvC
       Cyan7425_0567 primosomal protein N'
       Cyan7425_2343 SMC domain protein
       Cyan7425_3541 exonuclease SbcC
       Cyan7425_1475 nuclease SbcCD, D subunit
       Cyan7425_4367 metallophosphoesterase
       Cyan7425_2248 DNA replication and repair protein RecF
       Cyan7425_4575 ATP-dependent DNA helicase RecG
       Cyan7425_0978 DNA repair protein RecO
       Cyan7425_4182 recombination protein RecR
       Cyan7425_1274 DNA repair protein RecN
       Cyan7425_2462 CRISPR-associated protein Cas1
       Cyan7425_0151 CRISPR-associated protein Cas1
       Cyan7425_4088 CRISPR-associated protein Cas1
       Cyan7425_5340 CRISPR-associated protein Cas1
       Cyan7425_1367 DNA gyrase, A subunit
       Cyan7425_2787 DNA gyrase, A subunit
       Cyan7425_2993 DNA gyrase, B subunit
       Cyan7425_1050 DNA topoisomerase I
       Cyan7425_3274 DNA topoisomerase I
       Cyan7425_2489 histone family protein DNA-binding protein
       Cyan7425_2792 ATP-dependent DNA helicase, RecQ family
       Cyan7425_4141 ATP-dependent DNA helicase, RecQ family
       Cyan7425_1233 SOS-response transcriptional repressor, LexA
       Cyan7425_0943 putative ATP-dependent DNA helicase DinG
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K03547 sbcD; DNA repair protein SbcD/Mre11
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K15342 cas1; CRISP-associated protein Cas1
K15342 cas1; CRISP-associated protein Cas1
K15342 cas1; CRISP-associated protein Cas1
K15342 cas1; CRISP-associated protein Cas1
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
     03029 Mitochondrial biogenesis [BR:cyn03029]
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: April 13, 2024