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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:ecj03030]
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 JW1831 holE; DNA polymerase III, theta subunit
JW0205 dnaQ; DNA polymerase III epsilon subunit
JW0179 dnaE; DNA polymerase III alpha subunit
JW0459 dnaX; DNA polymerase III/DNA elongation factor III, tau and gamma subunits
JW1085 holB; DNA polymerase III, delta prime subunit
JW0635 holA; DNA polymerase III, delta subunit
JW4334 holD; DNA polymerase III, psi subunit
JW4216 holC; DNA polymerase III, chi subunit
JW3678 dnaN; DNA polymerase III, beta subunit
JW4012 dnaB; replicative DNA helicase
JW3038 dnaG; DNA primase
JW4020 ssb; Single-stranded DNA-binding protein
JW0204 rnhA; ribonuclease HI, degrades RNA of DNA-RNA hybrids
JW0178 rnhB; ribonuclease HII, degrades RNA of DNA-RNA hybrids
JW3835 polA; fused DNA polymerase I 5'->3' exonuclease, 3'->5' polymerase and 3'->5' exonuclease
JW2403 ligA; DNA ligase, NAD(+)-dependent
JW3622 ligB; DNA ligase, NAD(+)-dependent
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K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
K02316 dnaG; DNA primase [EC:2.7.7.101]
K03111 ssb; single-strand DNA-binding protein
K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03410 Base excision repair [PATH:ecj03410]
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03420 Nucleotide excision repair [PATH:ecj03420]
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03430 Mismatch repair [PATH:ecj03430]
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03440 Homologous recombination [PATH:ecj03440]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:ecj03000]
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03021 Transcription machinery [BR:ecj03021]
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03019 Messenger RNA biogenesis [BR:ecj03019]
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03041 Spliceosome
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03011 Ribosome [BR:ecj03011]
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03009 Ribosome biogenesis [BR:ecj03009]
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03016 Transfer RNA biogenesis [BR:ecj03016]
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03012 Translation factors [BR:ecj03012]
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03110 Chaperones and folding catalysts [BR:ecj03110]
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04131 Membrane trafficking [BR:ecj04131]
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04121 Ubiquitin system [BR:ecj04121]
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03051 Proteasome [BR:ecj03051]
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03032 DNA replication proteins [BR:ecj03032]
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JW0204 rnhA; ribonuclease HI, degrades RNA of DNA-RNA hybrids
JW1944 dcm; DNA cytosine methylase
JW3964 hupA; HU, DNA-binding transcriptional regulator, alpha subunit
JW0430 hupB; HU, DNA-binding transcriptional regulator, beta subunit
JW1702 ihfA; integration host factor (IHF), DNA-binding protein, alpha subunit
JW0895 ihfB; integration host factor (IHF), DNA-binding protein, beta subunit
JW3679 dnaA; chromosomal replication initiator protein DnaA, DNA-binding transcriptional dual regulator
JW4012 dnaB; replicative DNA helicase
JW4325 dnaC; DNA biosynthesis protein
JW3038 dnaG; DNA primase
JW4020 ssb; Single-stranded DNA-binding protein
JW0179 dnaE; DNA polymerase III alpha subunit
JW3678 dnaN; DNA polymerase III, beta subunit
JW4216 holC; DNA polymerase III, chi subunit
JW0635 holA; DNA polymerase III, delta subunit
JW1085 holB; DNA polymerase III, delta prime subunit
JW0205 dnaQ; DNA polymerase III epsilon subunit
JW0459 dnaX; DNA polymerase III/DNA elongation factor III, tau and gamma subunits
JW4334 holD; DNA polymerase III, psi subunit
JW1831 holE; DNA polymerase III, theta subunit
JW0178 rnhB; ribonuclease HII, degrades RNA of DNA-RNA hybrids
JW3835 polA; fused DNA polymerase I 5'->3' exonuclease, 3'->5' polymerase and 3'->5' exonuclease
JW2403 ligA; DNA ligase, NAD(+)-dependent
JW3622 ligB; DNA ligase, NAD(+)-dependent
JW1602 tus; inhibitor of replication at Ter, DNA-binding protein
JW3350 dam; DNA adenine methylase
JW0674 seqA; regulatory protein for replication initiation
JW5397 hda; ATPase regulatory factor involved in DnaA inactivation
JW2225 gyrA; DNA gyrase (type II topoisomerase), subunit A
JW5625 gyrB; DNA gyrase, subunit B
JW2987 parC; DNA topoisomerase IV, subunit A
JW2998 parE; DNA topoisomerase IV, subunit B
JW1266 topA; DNA topoisomerase I, omega subunit
JW1752 topB; DNA topoisomerase III
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K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
K05787 hupA; DNA-binding protein HU-alpha
K03530 hupB; DNA-binding protein HU-beta
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K02313 dnaA; chromosomal replication initiator protein
K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
K02315 dnaC; DNA replication protein DnaC
K02316 dnaG; DNA primase [EC:2.7.7.101]
K03111 ssb; single-strand DNA-binding protein
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K10748 tus; DNA replication terminus site-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03645 seqA; negative modulator of initiation of replication
K10763 hda; DnaA-homolog protein
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
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03036 Chromosome and associated proteins [BR:ecj03036]
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03400 DNA repair and recombination proteins [BR:ecj03400]
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03029 Mitochondrial biogenesis [BR:ecj03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Escherichia coli K-12 W3110