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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:eta03030]
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03410 Base excision repair [PATH:eta03410]
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03420 Nucleotide excision repair [PATH:eta03420]
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03430 Mismatch repair [PATH:eta03430]
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03440 Homologous recombination [PATH:eta03440]
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 ETA_27850 recJ; Single-stranded-DNA-specific exonuclease
ETA_30850 ssb; Single-strand binding protein
ETA_34510 recF; DNA replication and repair protein RecF
ETA_09940 recO; DNA repair protein RecO
ETA_24720 recR; Recombination protein
ETA_26680 recA; Recombinase A
ETA_00240 polA; DNA polymerase I
ETA_14890 ruvA; Holliday junction ATP-dependent DNA helicase
ETA_14900 ruvB; Holliday junction ATP-dependent DNA helicase
ETA_14880 ruvC; Crossover junction endodeoxyribonuclease
ETA_00390 recG; ATP-dependent DNA helicase
ETA_27460 recB; Exodeoxyribonuclease V beta chain
ETA_27530 recC; Exodeoxyribonuclease V gamma chain
ETA_27450 recD; Exodeoxyribonuclease V alpha chain
ETA_09050 dnaE; DNA polymerase III subunit alpha
ETA_34520 dnaN; DNA polymerase III subunit beta
ETA_24740 dnaX; DNA polymerase III subunit tau
ETA_23490 holA; DNA polymerase III, delta subunit
ETA_20160 holB; DNA polymerase III, delta' subunit
ETA_26340 dnaQ; DNA polymerase III epsilon subunit
ETA_15050 holE; DNA polymerase III theta subunit
ETA_03690 holC; DNA polymerase III, chi subunit HolC
ETA_06070 holD; DNA polymerase III, psi subunit
ETA_01220 priA; Primosomal protein N', ATP-dependent helicase priA (Replication factor Y)
ETA_29540 priB; Primosomal replication protein n
ETA_24770 priC; Primosomal replication protein N''
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04067 priC; primosomal replication protein N''
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:eta03000]
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03021 Transcription machinery [BR:eta03021]
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03019 Messenger RNA biogenesis [BR:eta03019]
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03041 Spliceosome
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03011 Ribosome [BR:eta03011]
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03009 Ribosome biogenesis [BR:eta03009]
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03016 Transfer RNA biogenesis [BR:eta03016]
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03012 Translation factors [BR:eta03012]
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03110 Chaperones and folding catalysts [BR:eta03110]
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04131 Membrane trafficking [BR:eta04131]
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04121 Ubiquitin system [BR:eta04121]
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03051 Proteasome [BR:eta03051]
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03032 DNA replication proteins [BR:eta03032]
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03036 Chromosome and associated proteins [BR:eta03036]
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03400 DNA repair and recombination proteins [BR:eta03400]
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ETA_22890 Methylated-DNA-(Protein)-cysteine S-methyltransferase
ETA_23180 phrB; Deoxyribodipyrimidine photo-lyase
ETA_09790 ung; Uracil-DNA-glycosylase
ETA_28460 mutY; A/G-specific adenine glycosylase
ETA_17800 nth; Endonuclease III
ETA_07950 mutT; Mutator protein MutT (7,8-dihydro-8-oxoguanine-triphosphatase)
ETA_24680 Conserved hypothetical protein
ETA_00640 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTP pyrophosphatase)
ETA_12340 alkB; DNA repair system specific for alkylated DNA
ETA_04140 mug; G/U mismatch-specific DNA glycosylase
ETA_22900 alkA; Putative DNA-3-methyladenine glycosidase II
ETA_34350 tag; DNA-3-methyladenine glycosylase I
ETA_00690 mutM; Formamidopyrimidine-DNA glycosylase
ETA_23100 nei; Endonuclease VIII
ETA_15690 xthA; Exodeoxyribonuclease III
ETA_12770 nfo; Endodeoxyribonuclease IV
ETA_01750 nfi; Endonuclease V (Deoxyinosine 3'endonuclease)
ETA_27850 recJ; Single-stranded-DNA-specific exonuclease
ETA_00440 Putative NAD-dependent DNA ligase
ETA_11030 lig; DNA ligase
ETA_00240 polA; DNA polymerase I
ETA_30860 uvrA; UvrABC system protein A (Excinuclease ABC subunit A)
ETA_22610 uvrB; UvrABC system protein B (Excinuclease ABC subunit B)
ETA_20770 uvrC; UvrABC system protein C
ETA_18520 cho; Excinuclease cho
ETA_02190 uvrD; DNA helicase II
ETA_01550 rpoB; DNA-directed RNA polymerase beta chain
ETA_01560 rpoC; DNA-directed RNA polymerase beta' chain
ETA_31380 rpoA; DNA-directed RNA polymerase alpha chain
ETA_00420 rpoZ; DNA-directed RNA polymerase omega chain
ETA_20060 mfd; Transcription-repair coupling factor (ATP-dependent helicase mfd)
ETA_26940 mutS; DNA mismatch repair protein
ETA_29690 mutL; DNA mismatch repair protein
ETA_27630 mutH; DNA mismatch repair protein
ETA_13610 sbcB; Exodeoxyribonuclease I
ETA_10340 xseA; Exodeoxyribonuclease VII large subunit
ETA_25250 xseB; Probable exodeoxyribonuclease VII small subunit
ETA_15040 exoX; DNA exonuclease X
ETA_09050 dnaE; DNA polymerase III subunit alpha
ETA_34520 dnaN; DNA polymerase III subunit beta
ETA_03690 holC; DNA polymerase III, chi subunit HolC
ETA_23490 holA; DNA polymerase III, delta subunit
ETA_20160 holB; DNA polymerase III, delta' subunit
ETA_26340 dnaQ; DNA polymerase III epsilon subunit
ETA_24740 dnaX; DNA polymerase III subunit tau
ETA_06070 holD; DNA polymerase III, psi subunit
ETA_15050 holE; DNA polymerase III theta subunit
ETA_30850 ssb; Single-strand binding protein
ETA_32030 dam; DNA adenine methylase (Deoxyadenosyl-methyltransferase)
ETA_14150 vsr; DNA mismatch endonuclease, patch repair protein
ETA_27460 recB; Exodeoxyribonuclease V beta chain
ETA_27530 recC; Exodeoxyribonuclease V gamma chain
ETA_27450 recD; Exodeoxyribonuclease V alpha chain
ETA_26680 recA; Recombinase A
ETA_14890 ruvA; Holliday junction ATP-dependent DNA helicase
ETA_14900 ruvB; Holliday junction ATP-dependent DNA helicase
ETA_14880 ruvC; Crossover junction endodeoxyribonuclease
ETA_01220 priA; Primosomal protein N', ATP-dependent helicase priA (Replication factor Y)
ETA_29540 priB; Primosomal replication protein n
ETA_24770 priC; Primosomal replication protein N''
ETA_25500 sbcC; ATP-dependent dsDNA exonuclease
ETA_25490 sbcD; Exonuclease subunit D
ETA_06730 radA; DNA repair protein radA (DNA repair protein sms)
ETA_34510 recF; DNA replication and repair protein RecF
ETA_00390 recG; ATP-dependent DNA helicase
ETA_09940 recO; DNA repair protein RecO
ETA_24720 recR; Recombination protein
ETA_09760 recN; Protein used in recombination and DNA repair (DNA repair protein RecN)
ETA_25550 rdgC; Recombination associated protein
ETA_08380 Conserved hypothetical protein
ETA_12610 yejH; Putative ATP-dependent helicase
ETA_03750 yjgR; Conserved hypothetical protein YjgR
ETA_12260 gyrA; DNA gyrase subunit A
ETA_34500 gyrB; DNA gyrase subunit B
ETA_16130 topA; DNA topoisomerase 1
ETA_01770 hupA; DNA-binding protein HU-alpha
ETA_25040 hopD; HopD, DNA-binding protein HU-beta (synonym HupB)
ETA_02720 fis; DNA-binding protein Fis
ETA_18350 ihfA; Integration host factor alpha-subunit (IHF-alpha)
ETA_21410 ihfB; Integration host factor beta-subunit (IHF-beta)
ETA_02230 recQ; ATP-dependent DNA helicase
ETA_15790 hns2; DNA-binding protein H-NS
ETA_pET490340 Heat-stable nucleoid-structuring protein
ETA_pET450380 hns; H-NS protein
ETA_07650 hns1; DNA-binding protein H-NS
ETA_26000 dinP; Damage inducible protein P (DNA polymerase IV)
ETA_14510 umuC; UmuC protein
ETA_14520 umuD; Protein UmuD
ETA_31010 lexA; LexA repressor
ETA_07310 polB; DNA polymerase II
ETA_20530 dinI; Putative DNA damage-inducible protein I, inhibits UmuD processing
ETA_26670 recX; Regulatory protein RecX
ETA_01920 rep; ATP-dependent DNA helicase Rep
ETA_20980 helD; Helicase IV
ETA_22280 dinG; DNA-damage-inducible protein G
ETA_15300 Probable ATP-dependent helicase YoaA
ETA_09380 nrdE; Ribonucleoside-diphosphate reductase 2, alpha subunit
ETA_12240 nrdA; Ribonucleoside-diphosphate reductase 1 alpha subunit
ETA_09370 nrdF; Ribonucleoside-diphosphate reductase 2, beta subunit
ETA_12230 nrdB; Ribonucleoside-diphosphate reductase 1 beta chain
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K05984 cho; excinuclease Cho [EC:3.1.25.-]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03573 mutH; DNA mismatch repair protein MutH
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04067 priC; primosomal replication protein N''
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K15342 cas1; CRISP-associated protein Cas1
K19789 radD; DNA repair protein RadD
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K05787 hupA; DNA-binding protein HU-alpha
K03530 hupB; DNA-binding protein HU-beta
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K02336 polB; DNA polymerase II [EC:2.7.7.7]
K12149 dinI; DNA-damage-inducible protein I
K03565 recX; regulatory protein
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K03658 helD; DNA helicase IV [EC:5.6.2.4]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:eta03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Erwinia tasmaniensis