 Prokaryotes
|
Bacteria
|
Gammaproteobacteria - Others
|
Vibrio
|
 vfl Vibrio fluvialis
|
1/2
|
Grimontia
|
gho Grimontia hollisae
|
1/2
|
Shewanella
|
sse Shewanella sediminis
shl Shewanella halifaxensis
swd Shewanella woodyi
|
1/2
1/2
1/2
|
Halioglobus
|
halc Halioglobus sp. IMCC14385
|
1/2
|
Methylococcus
|
mca Methylococcus capsulatus
|
2/2
|
Methylomonas
|
mmt Methylomonas methanica
mdn Methylomonas denitrificans
mdh Methylomonas sp. DH-1
mko Methylomonas koyamae
metl Methylomonas sp. LW13
|
1/2
1/2
1/2
1/2
1/2
|
Methylomicrobium
|
mah Methylomicrobium alcaliphilum
mbur Methylomicrobium buryatense
|
2/2
2/2
|
Methylovulum
|
mpsy Methylovulum psychrotolerans
|
1/2
|
Methylocaldum
|
mmai Methylocaldum marinum
|
2/2
|
Candidatus Methylospira
|
mmob Candidatus Methylospira mobilis
|
2/2
|
Nitrosococcus
|
noc Nitrosococcus oceani
nhl Nitrosococcus halophilus
nwa Nitrosococcus watsonii
nwr Nitrosococcus wardiae
|
2/2
2/2
2/2
2/2
|
Thiocystis
|
tvi Thiocystis violascens
|
1/2
|
Thioflavicoccus
|
tmb Thioflavicoccus mobilis
|
1/2
|
Candidatus Nitrosoglobus
|
ntt Candidatus Nitrosoglobus terrae
|
2/2
|
Thermochromatium
|
ttp Thermochromatium tepidum
|
1/2
|
Gynuella
|
gsn Gynuella sunshinyii
|
1/2
|
Sulfurifustis
|
sva Sulfurifustis variabilis
|
1/2
|
Candidatus Thioglobus
|
tho Candidatus Thioglobus autotrophicus
|
1/2
|
Betaproteobacteria
|
Rhodoferax
|
rfr Rhodoferax ferrireducens
|
1/2
|
Comamonas
|
cof Comamonas sp. NLF 7-7
|
1/2
|
Hydrogenophaga
|
hpse Hydrogenophaga pseudoflava
|
1/2
|
Nitrosomonas
|
neu Nitrosomonas europaea
net Nitrosomonas eutropha
nit Nitrosomonas sp. AL212
nii Nitrosomonas sp. Is79A3
nco Nitrosomonas communis
nur Nitrosomonas ureae
nst Nitrosomonas stercoris
|
2/2
2/2
2/2
2/2
2/2
2/2
2/2
|
Nitrosospira
|
nmu Nitrosospira multiformis
nlc Nitrosospira lacus
|
2/2
2/2
|
Azoarcus
|
azr Azoarcus sp. DD4
|
1/2
|
Epsilonproteobacteria
|
Helicobacter
|
hfe Helicobacter felis
hbi Helicobacter bizzozeronii
hce Helicobacter cetorum MIT 00-7128
hcm Helicobacter cetorum MIT 99-5656
hhm Helicobacter heilmannii
|
1/2
1/2
1/2
1/2
1/2
|
Campylobacter
|
cft Campylobacter fetus subsp. fetus 04/554
cfv Campylobacter fetus subsp. venerealis cfvi03/293
cfx Campylobacter fetus subsp. venerealis 97/608
cfz Campylobacter fetus subsp. venerealis 84-112
camp Campylobacter fetus subsp. testudinum 03-427
cfp Campylobacter fetus subsp. testudinum pet-3
ccoc Campylobacter concisus ATCC 33237
caj Campylobacter iguaniorum
cgra Campylobacter gracilis
chyo Campylobacter hyointestinalis
cpin Campylobacter pinnipediorum
|
1/2
1/2
1/2
1/2
1/2
1/2
1/2
1/2
1/2
1/2
1/2
|
Nautilia
|
nam Nautilia profundicola
nap Nautilia sp. PV-1
|
1/2
1/2
|
Caminibacter
|
cmed Caminibacter mediatlanticus
|
1/2
|
Cetia
|
cpaf Cetia pacifica
|
1/2
|
Deltaproteobacteria
|
Geobacter
|
gme Geobacter metallireducens
glo Geobacter lovleyi
gbm Geobacter bemidjiensis
geb Geobacter sp. M18
gpi Geobacter pickeringii
|
1/2
1/2
1/2
1/2
1/2
|
Geoalkalibacter
|
gsb Geoalkalibacter subterraneus
|
1/2
|
Desulfuromonas
|
des Desulfuromonas soudanensis
deu Desulfuromonas sp. DDH964
|
1/2
1/2
|
Desulfovibrio
|
ddn Desulfovibrio desulfuricans ND132
dhy Desulfovibrio hydrothermalis
dfl Desulfovibrio ferrophilus
|
1/2
1/2
1/2
|
Desulfocurvibacter
|
daf Desulfovibrio africanus
|
1/2
|
Pseudodesulfovibrio
|
dpi Pseudodesulfovibrio piezophilus
dej Pseudodesulfovibrio indicus
pprf Pseudodesulfovibrio profundus
psel Pseudodesulfovibrio sp. SRB007
|
1/2
1/2
1/2
1/2
|
Desulfomicrobium
|
dba Desulfomicrobium baculatum
|
1/2
|
Desulfocapsa
|
dsf Desulfocapsa sulfexigens
|
1/2
|
Desulfococcus
|
dml Desulfococcus multivorans
|
1/2
|
Desulfatibacillum
|
dal Desulfatibacillum alkenivorans
|
1/2
|
Desulfobacterium
|
dat Desulfobacterium autotrophicum
|
1/2
|
Desulfobacula
|
dto Desulfobacula toluolica
|
1/2
|
Desulfosarcina
|
dov Desulfosarcina ovata
dwd Desulfosarcina widdelii
dalk Desulfosarcina alkanivorans
|
1/2
1/2
1/2
|
Anaeromyxobacter
|
ade Anaeromyxobacter dehalogenans 2CP-C
acp Anaeromyxobacter dehalogenans 2CP-1
ank Anaeromyxobacter sp. K
|
1/2
1/2
1/2
|
Cystobacter
|
cfus Cystobacter fuscus
|
1/2
|
Labilithrix
|
llu Labilithrix luteola
|
1/2
|
Minicystis
|
mrm Minicystis rosea
|
1/2
|
Desulfomonile
|
dti Desulfomonile tiedjei
|
1/2
|
Desulfoglaeba
|
dax Desulfoglaeba alkanexedens
|
1/2
|
Desulfurella
|
dav Desulfurella acetivorans
|
1/2
|
Alphaproteobacteria
|
Methylocystis
|
msc Methylocystis sp. SC2
mbry Methylocystis bryophila
mros Methylocystis rosea
mhey Methylocystis heyeri
mpar Methylocystis parvus
|
2/2
1/2
2/2
2/2
2/2
|
Methylosinus
|
mtw Methylosinus trichosporium
|
1/2
|
Ruegeria
|
sil Ruegeria pomeroyi
|
1/2
|
Magnetospira
|
magq Magnetospira sp. QH-2
|
1/2
|
Magnetococcus
|
mgm Magnetococcus marinus
|
1/2
|
Firmicutes
|
Desulfosporosinus
|
dor Desulfosporosinus orientis
dai Desulfosporosinus acidiphilus
dmi Desulfosporosinus meridiei
|
1/2
1/2
1/2
|
Actinobacteria
|
Mycobacterium
|
mdx Mycobacterium dioxanotrophicus
|
1/2
|
Mycolicibacterium
|
mcb Mycolicibacterium chubuense
mrh Mycolicibacterium rhodesiae
|
1/2
1/2
|
Deinococcus-Thermus
|
Oceanithermus
|
opr Oceanithermus profundus
|
1/2
|
Verrucomicrobia
|
Methylacidiphilum
|
min Methylacidiphilum infernorum
mkc Methylacidiphilum kamchatkense
|
2/2
2/2
|
Planctomycetes
|
Planctomyces
|
plh Planctomyces sp. SH-PL62
|
1/2
|
Paludisphaera
|
pbor Paludisphaera borealis
|
1/2
|
Aquisphaera
|
agv Aquisphaera giovannonii
|
1/2
|
Candidatus Kuenenia
|
kst Candidatus Kuenenia stuttgartiensis
|
1/2
|
Anaerohalosphaera
|
alus Anaerohalosphaera lusitana
|
1/2
|
Ignavibacteriae
|
Ignavibacterium
|
ial Ignavibacterium album
|
1/2
|
Melioribacter
|
mro Melioribacter roseus
|
1/2
|
Aquificae
|
Thermosulfidibacter
|
ttk Thermosulfidibacter takaii
|
1/2
|
Thermovibrio
|
tam Thermovibrio ammonificans
|
1/2
|
Desulfurobacterium
|
dte Desulfurobacterium thermolithotrophum
|
1/2
|
Deferribacteres
|
Deferribacter
|
ddf Deferribacter desulfuricans
|
1/2
|
Denitrovibrio
|
dap Denitrovibrio acetiphilus
|
1/2
|
Flexistipes
|
fsi Flexistipes sinusarabici
|
1/2
|
Calditrichaeota
|
Caldithrix
|
caby Caldithrix abyssi
|
1/2
|
Nitrospirae
|
Nitrospira
|
nmv Nitrospira moscoviensis
nio Candidatus Nitrospira inopinata
nja Nitrospira japonica
|
1/2
2/2
1/2
|
Thermodesulfobacteria
|
Thermodesulfatator
|
tid Thermodesulfatator indicus
|
1/2
|
Thermodesulfobacterium
|
top Thermodesulfobacterium geofontis
|
1/2
|
Thermosulfuriphilus
|
tav Thermosulfuriphilus ammonigenes
|
1/2
|
Thermosulfurimonas
|
tmai Thermosulfurimonas marina
|
1/2
|
unclassified Bacteria
|
Candidatus Methylomirabilis
|
mox Candidatus Methylomirabilis oxyfera
|
2/2
|
Archaea
|
Euryarchaeota
|
Ferroglobus
|
fpl Ferroglobus placidus
|
1/2
|
Geoglobus
|
gac Geoglobus acetivorans
gah Geoglobus ahangari
|
1/2
1/2
|
Crenarchaeota
|
Ignicoccus
|
iho Ignicoccus hospitalis
|
1/2
|
Pyrolobus
|
pfm Pyrolobus fumarii
|
1/2
|
Thaumarchaeota
|
Nitrosopumilus
|
nmr Nitrosopumilus maritimus
nir Candidatus Nitrosopumilus sediminis
nkr Candidatus Nitrosopumilus koreensis
nid Nitrosopumilus piranensis
nin Nitrosopumilus adriaticus
niw Candidatus Nitrosopumilus sp. SW
|
1/2
1/2
1/2
1/2
1/2
1/2
|
Candidatus Nitrosomarinus
|
nct Candidatus Nitrosomarinus catalina
|
1/2
|
Cenarchaeum
|
csy Cenarchaeum symbiosum
|
1/2
|
Nitrososphaera
|
nga Candidatus Nitrososphaera gargensis
nvn Nitrososphaera viennensis
nev Candidatus Nitrososphaera evergladensis
|
1/2
1/2
1/2
|
Candidatus Nitrosocosmicus
|
taa Candidatus Nitrosocosmicus oleophilus
nfn Candidatus Nitrosocosmicus franklandus
|
1/2
1/2
|
Candidatus Nitrosocaldus
|
ncv Candidatus Nitrosocaldus cavascurensis
|
1/2
|
Candidatus Nitrosopelagicus
|
nbv Candidatus Nitrosopelagicus brevis
|
1/2
|
Candidatus Nitrosotenuis
|
tah Candidatus Nitrosotenuis cloacae
|
1/2
|
Candidatus Nitrosotalea
|
ndv Candidatus Nitrosotalea devanaterra
|
1/2
|
KEGG Organisms (M00528)