KEGG Orthology (KO) - Frankia inefficax

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     KO
 09100 Metabolism
 
   09101 Carbohydrate metabolism
 
   09102 Energy metabolism
 
   09103 Lipid metabolism
 
   09104 Nucleotide metabolism
 
   09105 Amino acid metabolism
 
   09106 Metabolism of other amino acids
 
   09107 Glycan biosynthesis and metabolism
 
   09108 Metabolism of cofactors and vitamins
     00730 Thiamine metabolism [PATH:fri00730]
     00740 Riboflavin metabolism [PATH:fri00740]
     00750 Vitamin B6 metabolism [PATH:fri00750]
     00760 Nicotinate and nicotinamide metabolism [PATH:fri00760]
     00770 Pantothenate and CoA biosynthesis [PATH:fri00770]
     00780 Biotin metabolism [PATH:fri00780]
     00785 Lipoic acid metabolism [PATH:fri00785]
     00790 Folate biosynthesis [PATH:fri00790]
     00670 One carbon pool by folate [PATH:fri00670]
     00830 Retinol metabolism
     00860 Porphyrin and chlorophyll metabolism [PATH:fri00860]
       FraEuI1c_2635 aminotransferase class I and II
       FraEuI1c_1659 Glutamyl/glutaminyl-tRNA synthetase
       FraEuI1c_6312 glutamyl-tRNA reductase
       FraEuI1c_4905 aminotransferase class-III
       FraEuI1c_6302 glutamate-1-semialdehyde-2
       FraEuI1c_0781 aminotransferase class-III
       FraEuI1c_6309 Porphobilinogen synthase
       FraEuI1c_6311 porphobilinogen deaminase
       FraEuI1c_4515 Uroporphyrinogen III synthase HEM4
       FraEuI1c_2290 uroporphyrinogen decarboxylase
       FraEuI1c_2291 protoporphyrinogen oxidase
       FraEuI1c_4811 ferrochelatase
       FraEuI1c_6282 uroporphyrin-III C-methyltransferase
       FraEuI1c_6310 Uroporphyrinogen III synthase HEM4
       FraEuI1c_6018 uroporphyrin-III C-methyltransferase
       FraEuI1c_4863 protoheme IX farnesyltransferase
       FraEuI1c_4860 cytochrome oxidase assembly
       FraEuI1c_0481 precorrin-3B C17-methyltransferase
       FraEuI1c_0479 nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein
       FraEuI1c_0471 precorrin-4 C11-methyltransferase
       FraEuI1c_0482 precorrin-6A synthase (deacetylating)
       FraEuI1c_0470 precorrin-6x reductase
       FraEuI1c_0472 precorrin-6y C5
       FraEuI1c_0480 Precorrin-8X methylmutase
       FraEuI1c_0475 cobyrinic acid a
       FraEuI1c_0478 cobaltochelatase
       FraEuI1c_0942 ATP/cobalamin adenosyltransferase
       FraEuI1c_0474 cob(I)alamin adenosyltransferase
       FraEuI1c_0477 cobyric acid synthase CobQ
       FraEuI1c_0476 cobalamin biosynthesis protein CobD
       FraEuI1c_5213 cobalbumin biosynthesis protein
       FraEuI1c_5215 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase
       FraEuI1c_1772 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
       FraEuI1c_3524 Phosphoglycerate mutase
       FraEuI1c_0473 Magnesium chelatase
       FraEuI1c_0666 putative magnesium chelatase
       FraEuI1c_5660 Beta-glucuronidase
       FraEuI1c_4796 bacterioferritin
       FraEuI1c_2550 Ferritin Dps family protein
K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.99.1.1 4.99.1.9]
K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
K02257 COX10; heme o synthase [EC:2.5.1.141]
K02259 COX15; cytochrome c oxidase assembly protein subunit 15
K13540 cobIJ; precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase [EC:2.1.1.130 2.1.1.131]
K02229 cobG; precorrin-3B synthase [EC:1.14.13.83]
K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
K00595 cobL; precorrin-6Y C5,15-methyltransferase (decarboxylating) [EC:2.1.1.132]
K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
K03594 bfr; bacterioferritin [EC:1.16.3.1]
K03594 bfr; bacterioferritin [EC:1.16.3.1]
     00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:fri00130]
 
   09109 Metabolism of terpenoids and polyketides
 
   09110 Biosynthesis of other secondary metabolites
 
   09111 Xenobiotics biodegradation and metabolism
 
   09112 Not included in regular maps
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
     03030 DNA replication [PATH:fri03030]
       FraEuI1c_1800 DNA polymerase III
       FraEuI1c_2448 DNA polymerase III
       FraEuI1c_6865 DNA polymerase III
       FraEuI1c_0316 AAA ATPase central domain protein
       FraEuI1c_2192 DNA polymerase III
       FraEuI1c_2074 DNA polymerase III
       FraEuI1c_0002 DNA polymerase III
       FraEuI1c_7162 replicative DNA helicase
       FraEuI1c_2222 DNA primase
       FraEuI1c_7165 single-strand binding protein
       FraEuI1c_5193 single-strand binding protein
       FraEuI1c_5678 Ribonuclease H
       FraEuI1c_3524 Phosphoglycerate mutase
       FraEuI1c_1073 Ribonuclease H
       FraEuI1c_4916 DNA polymerase I
       FraEuI1c_1353 DNA-directed DNA polymerase
       FraEuI1c_1004 DNA ligase
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02314 dnaB; replicative DNA helicase [EC:3.6.4.12]
K02316 dnaG; DNA primase [EC:2.7.7.101]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
     03410 Base excision repair [PATH:fri03410]
     03420 Nucleotide excision repair [PATH:fri03420]
     03430 Mismatch repair [PATH:fri03430]
     03440 Homologous recombination [PATH:fri03440]
     03450 Non-homologous end-joining [PATH:fri03450]
     03460 Fanconi anemia pathway
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:fri03000]
     03021 Transcription machinery [BR:fri03021]
     03019 Messenger RNA biogenesis [BR:fri03019]
     03041 Spliceosome
     03011 Ribosome [BR:fri03011]
     03009 Ribosome biogenesis [BR:fri03009]
     03016 Transfer RNA biogenesis [BR:fri03016]
     03012 Translation factors [BR:fri03012]
     03110 Chaperones and folding catalysts [BR:fri03110]
     04131 Membrane trafficking [BR:fri04131]
     04121 Ubiquitin system [BR:fri04121]
     03051 Proteasome [BR:fri03051]
     03032 DNA replication proteins [BR:fri03032]
       FraEuI1c_5678 Ribonuclease H
       FraEuI1c_5837 C-5 cytosine-specific DNA methylase
       FraEuI1c_6953 DNA-cytosine methyltransferase
       FraEuI1c_7149 DNA-cytosine methyltransferase
       FraEuI1c_6846 C-5 cytosine-specific DNA methylase
       FraEuI1c_1038 histone family protein DNA-binding protein
       FraEuI1c_0001 chromosomal replication initiator protein DnaA
       FraEuI1c_7162 replicative DNA helicase
       FraEuI1c_2222 DNA primase
       FraEuI1c_7165 single-strand binding protein
       FraEuI1c_5193 single-strand binding protein
       FraEuI1c_2448 DNA polymerase III
       FraEuI1c_2074 DNA polymerase III
       FraEuI1c_0002 DNA polymerase III
       FraEuI1c_2192 DNA polymerase III
       FraEuI1c_0316 AAA ATPase central domain protein
       FraEuI1c_1800 DNA polymerase III
       FraEuI1c_6865 DNA polymerase III
       FraEuI1c_3524 Phosphoglycerate mutase
       FraEuI1c_1073 Ribonuclease H
       FraEuI1c_4916 DNA polymerase I
       FraEuI1c_1353 DNA-directed DNA polymerase
       FraEuI1c_1004 DNA ligase
       FraEuI1c_7071 DNA adenine methylase
       FraEuI1c_0006 DNA gyrase
       FraEuI1c_0005 DNA gyrase
       FraEuI1c_0318 DNA topoisomerase I
K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
K03530 hupB; DNA-binding protein HU-beta
K02313 dnaA; chromosomal replication initiator protein
K02314 dnaB; replicative DNA helicase [EC:3.6.4.12]
K02316 dnaG; DNA primase [EC:2.7.7.101]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
     03036 Chromosome and associated proteins [BR:fri03036]
     03400 DNA repair and recombination proteins [BR:fri03400]
     03029 Mitochondrial biogenesis [BR:fri03029]
 
   09183 Protein families: signaling and cellular processes
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: February 26, 2020