KEGG Orthology (KO) - Francisella tularensis subsp. novicida U112

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
     03030 DNA replication [PATH:ftn03030]
     03410 Base excision repair [PATH:ftn03410]
     03420 Nucleotide excision repair [PATH:ftn03420]
     03430 Mismatch repair [PATH:ftn03430]
     03440 Homologous recombination [PATH:ftn03440]
       FTN_0569 recJ; single-stranded-DNA-specific exonuclease
       FTN_0124 ssb; single-strand DNA binding protein
       FTN_0734 recF; RecFOR complex, RecF component
       FTN_1243 recO; RecFOR complex, RecO component
       FTN_1197 recR; RecFOR complex, RecR component
       FTN_0122 recA; recombinase A protein
       FTN_1604 polA; DNA polymerase I
       FTN_1025 ruvA; holliday junction DNA helicase, subunit A
       FTN_0891 ruvB; holliday junction DNA helicase, subunit B
       FTN_1027 ruvC; holliday junction endodeoxyribonuclease
       FTN_0335 recG; ATP-dependent DNA helicase
       FTN_1357 recB; ATP-dependent exoDNAse (exonuclease V) beta subunit
       FTN_1359 recC; exodeoxyribonuclease V, gamma subunit
       FTN_1356 recD; exodeoxyribonuclease V, alpha subunit
       FTN_0499 dnaE; DNA polymerase III, alpha subunit
       FTN_0002 dnaN; DNA polymerase III, beta subunit
       FTN_0166 dnaX; DNA polymerase III, gamma/tau subunits
       FTN_0173 holA; DNA polymerase III, delta subunit
       FTN_0551 holB; DNA polymerase III, delta prime subunit
       FTN_0968 dnaQ; DNA polymerase III, epsilon subunit
       FTN_0213 holC; DNA polymerase III, chi subunit
       FTN_0189 priA; primosomal protein N
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA [EC:3.6.4.12]
K03551 ruvB; holliday junction DNA helicase RuvB [EC:3.6.4.12]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:3.6.4.12]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]
     03450 Non-homologous end-joining
     03460 Fanconi anemia pathway
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:ftn03000]
     03021 Transcription machinery [BR:ftn03021]
     03019 Messenger RNA biogenesis [BR:ftn03019]
     03041 Spliceosome
     03011 Ribosome [BR:ftn03011]
     03009 Ribosome biogenesis [BR:ftn03009]
     03016 Transfer RNA biogenesis [BR:ftn03016]
     03012 Translation factors [BR:ftn03012]
     03110 Chaperones and folding catalysts [BR:ftn03110]
     04131 Membrane trafficking [BR:ftn04131]
     04121 Ubiquitin system [BR:ftn04121]
     03051 Proteasome [BR:ftn03051]
     03032 DNA replication proteins [BR:ftn03032]
     03036 Chromosome and associated proteins [BR:ftn03036]
     03400 DNA repair and recombination proteins [BR:ftn03400]
       FTN_1528 methylated DNA-protein cysteine methyltransferase
       FTN_0361 deoxyribodipyrimidine photolyase
       FTN_1121 phrB; deoxyribodipyrimidine photolyase
       FTN_1486 ung; uracil DNA glycosylase
       FTN_1035 nth; endonuclease III
       FTN_0865 mutT; mutator protein
       FTN_0338 MutT/nudix family protein
       FTN_0233 dut; dUTP pyrophosphatase
       FTN_0673 tag; 3-methyladenine DNA glycosylase
       FTN_0603 mutM; formamidopyrimidine-DNA glycosylase
       FTN_0838 xthA; exodeoxyribonuclease III
       FTN_0569 recJ; single-stranded-DNA-specific exonuclease
       FTN_1350 ligA; DNA ligase
       FTN_1604 polA; DNA polymerase I
       FTN_0666 uvrA; excinuclease ABC, subunit A
       FTN_1176 uvrB; excinuclease ABC, subunit B
       FTN_0680 uvrC; excinuclease ABC, subunit C
       FTN_1594 uvrD; DNA helicase II
       FTN_0776 DNA and RNA helicases Superfamily I protein
       FTN_1568 rpoB; DNA-directed RNA polymerase, beta subunit/140 kD subunit
       FTN_1567 rpoC; DNA-directed RNA polymerase, beta' subunit/160 kD subunit
       FTN_0264 rpoA; DNA-directed RNA polymerase, alpha subunit
       FTN_1412 DNA-directed RNA polymerase
       FTN_0613 rpoZ; DNA-directed RNA polymerase, subunit K/omega
       FTN_1039 mfd; transcription-repair coupling factor
       FTN_1509 mutS; MutS, subunit of MutHLS complex, methyl-directed mismatch repair protein
       FTN_0577 mutL; DNA mismatch repair enzyme with ATPase activity
       FTN_1177 sbcB; exodeoxyribonuclease I
       FTN_1168 xseA; exodeoxyribonuclease VII large subunit
       FTN_1167 protein of unknown function
       FTN_0499 dnaE; DNA polymerase III, alpha subunit
       FTN_0002 dnaN; DNA polymerase III, beta subunit
       FTN_0213 holC; DNA polymerase III, chi subunit
       FTN_0173 holA; DNA polymerase III, delta subunit
       FTN_0551 holB; DNA polymerase III, delta prime subunit
       FTN_0968 dnaQ; DNA polymerase III, epsilon subunit
       FTN_0166 dnaX; DNA polymerase III, gamma/tau subunits
       FTN_0124 ssb; single-strand DNA binding protein
       FTN_1357 recB; ATP-dependent exoDNAse (exonuclease V) beta subunit
       FTN_1359 recC; exodeoxyribonuclease V, gamma subunit
       FTN_1356 recD; exodeoxyribonuclease V, alpha subunit
       FTN_0122 recA; recombinase A protein
       FTN_1025 ruvA; holliday junction DNA helicase, subunit A
       FTN_0891 ruvB; holliday junction DNA helicase, subunit B
       FTN_1027 ruvC; holliday junction endodeoxyribonuclease
       FTN_0189 priA; primosomal protein N
       FTN_0399 radA; DNA repair protein radA
       FTN_0734 recF; RecFOR complex, RecF component
       FTN_0335 recG; ATP-dependent DNA helicase
       FTN_1243 recO; RecFOR complex, RecO component
       FTN_1197 recR; RecFOR complex, RecR component
       FTN_0412 recN; DNA repair protein
       FTN_0790 rdgC; recombination associated protein
       FTN_0758 conserved hypothetical protein
       FTN_1484 gyrA; DNA gyrase, subunit A
       FTN_0600 gyrB; DNA gyrase subunit B
       FTN_0432 topA; DNA topoisomerase I
       FTN_1054 hupB; DNA-binding protein HU-beta
       FTN_0986 dinP; DNA-damage inducible protein P
       FTN_0123 recX; inhibitor of RecA
       FTN_0787 rep; UvrD/REP superfamily I DNA and RNA helicases
       FTN_0981 nrdA; ribonucleoside-diphosphate reductase, alpha subunit
       FTN_0983 bifunctional protein: glutaredoxin 3/ribonucleotide reductase beta subunit
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phrB; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K01669 phrB; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K10773 NTH; endonuclease III [EC:4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP pyrophosphatase [EC:3.6.1.23]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA [EC:3.6.4.12]
K03551 ruvB; holliday junction DNA helicase RuvB [EC:3.6.4.12]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:3.6.4.12]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K15342 cas1; CRISP-associated protein Cas1
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03565 recX; regulatory protein
K03656 rep; ATP-dependent DNA helicase Rep [EC:3.6.4.12]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
     03029 Mitochondrial biogenesis [BR:ftn03029]
 
   09183 Protein families: signaling and cellular processes
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: January 27, 2020