Messenger RNA Biogenesis - Heterocephalus glaber (naked mole-rat)

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     KO
 Eukaryotic type
   mRNA processing factors
   mRNA surveillance and transport factors
     Transport factors
     Surveillance factors
     Factors involved in mRNA localization
     mRNA cycle factors
       Common to processing body (P body) and stress granule
       P-body specific factors
         101725496 m7GpppN-mRNA hydrolase-like
         101697533 Dcp2; decapping mRNA 2
         101714261 Dcp1a; decapping mRNA 1A
         101716540 Dcp1b; decapping mRNA 1B
         101708340 Lsm1; LSM1 homolog, mRNA degradation associated
         101700991 Lsm2; LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
         101708310 Lsm3; LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
         101720806 Lsm4; LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
         101720314 Lsm5; LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
         101699926 Lsm6; LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
         101709127 Lsm7; LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
         101708401 Lsm8; LSM8 homolog, U6 small nuclear RNA associated
         106008778 U6 snRNA-associated Sm-like protein LSm8
         101710626 Klc1; kinesin light chain 1
         101698001 Klc3; kinesin light chain 3
         101720397 Klc4; kinesin light chain 4
         101700298 Klc2; kinesin light chain 2
         101697151 Myo5a; myosin VA
         101698272 Myo5c; myosin VC
         101722462 Myo5b; myosin VB
         101697674 tubulin alpha-3 chain
         101709208 Tuba8; tubulin alpha 8
         101726622 tubulin alpha-1C chain-like
         106010591 tubulin alpha-1D chain-like
         101715424 tubulin alpha-1B chain-like
         101716697 Tuba1b; tubulin alpha 1b
         101720265 Tuba4a; tubulin alpha 4a
         101707673 tubulin alpha-1C chain-like
         101697931 Tubal3; tubulin alpha like 3
         101715767 uncharacterized LOC101715767
         101710474 tubulin alpha-3 chain-like
         101701752 Lrrc74b; leucine rich repeat containing 74B
         101721995 Cpeb4; cytoplasmic polyadenylation element binding protein 4
         101724060 Cpeb2; cytoplasmic polyadenylation element binding protein 2
         101726453 Cpeb3; cytoplasmic polyadenylation element binding protein 3
         101699004 Cpeb1; cytoplasmic polyadenylation element binding protein 1
         101715025 Gemin5; gem nuclear organelle associated protein 5
         101716366 Tacc3; transforming acidic coiled-coil containing protein 3
         101724472 Tnrc6a; trinucleotide repeat containing 6A
         101720757 Tnrc6b; trinucleotide repeat containing 6B
         101726218 Tnrc6c; trinucleotide repeat containing 6C
         101713904 Cnot1; CCR4-NOT transcription complex subunit 1
         101722403 Cnot2; CCR4-NOT transcription complex subunit 2
         101726127 Cnot3; CCR4-NOT transcription complex subunit 3
         101711678 Cnot4; CCR4-NOT transcription complex subunit 4
         101700106 Cnot6; CCR4-NOT transcription complex subunit 6
         101708643 Cnot6l; CCR4-NOT transcription complex subunit 6 like
         101717232 Cnot8; CCR4-NOT transcription complex subunit 8
         101699835 Cnot7; CCR4-NOT transcription complex subunit 7
         101721299 KIAA0355 ortholog
         101704331 Dis3l2; DIS3 like 3'-5' exoribonuclease 2
         101708269 Pan2; PAN2 poly(A) specific ribonuclease subunit
         101711937 Pan3; PAN3 poly(A) specific ribonuclease subunit
         101716692 Btg3; BTG anti-proliferation factor 3
         101712701 protein BTG4-like
         101724408 Btg1; BTG anti-proliferation factor 1
         101699455 protein Tob1-like
         101717914 Btg4; BTG anti-proliferation factor 4
         101702273 Btg2; BTG anti-proliferation factor 2
         101720365 Tob1; transducer of ERBB2, 1
         101704991 protein BTG3-like
         101701223 Eif4enif1; eukaryotic translation initiation factor 4E nuclear import factor 1
         101714568 eukaryotic translation initiation factor 4E transporter-like
         101707355 Patl1; PAT1 homolog 1, processing body mRNA decay factor
         101705814 Edc3; enhancer of mRNA decapping 3
         101702722 Edc4; enhancer of mRNA decapping 4
         101717975 Nanos2; nanos C2HC-type zinc finger 2
         101699943 Nanos3; nanos C2HC-type zinc finger 3
         101707612 Upf2; UPF2 regulator of nonsense transcripts homolog (yeast)
         101724600 Upf3a; UPF3 regulator of nonsense transcripts homolog A (yeast)
         101700790 Upf3b; UPF3 regulator of nonsense transcripts homolog B (yeast)
         101709110 Trim21; tripartite motif containing 21
         101711956 Trim71; tripartite motif containing 71
         101697518 Polr2g; RNA polymerase II subunit G
         101724844 Eif2ak2; eukaryotic translation initiation factor 2 alpha kinase 2
         101698390 Zar1l; zygote arrest 1-like
         101698857 Zar1; zygote arrest 1
         101711979 Ythdf1; YTH N6-methyladenosine RNA binding protein 1
         101721610 Ythdf2; YTH N6-methyladenosine RNA binding protein 2
         101722275 Ythdf3; YTH N6-methyladenosine RNA binding protein 3
K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] 
K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] 
K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-] 
K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 
K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
K10407 KLC; kinesin light chain 
K10407 KLC; kinesin light chain 
K10407 KLC; kinesin light chain 
K10407 KLC; kinesin light chain 
K10357 MYO5; myosin V 
K10357 MYO5; myosin V 
K10357 MYO5; myosin V 
K07374 TUBA; tubulin alpha 
K07374 TUBA; tubulin alpha 
K07374 TUBA; tubulin alpha 
K07374 TUBA; tubulin alpha 
K07374 TUBA; tubulin alpha 
K07374 TUBA; tubulin alpha 
K07374 TUBA; tubulin alpha 
K07374 TUBA; tubulin alpha 
K07374 TUBA; tubulin alpha 
K07374 TUBA; tubulin alpha 
K07374 TUBA; tubulin alpha 
K07374 TUBA; tubulin alpha 
K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
K13133 GEMIN5; gem associated protein 5 
K14283 TACC3; transforming acidic coiled-coil-containing protein 3 
K18412 TNRC6; trinucleotide repeat-containing gene 6 protein 
K18412 TNRC6; trinucleotide repeat-containing gene 6 protein 
K18412 TNRC6; trinucleotide repeat-containing gene 6 protein 
K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
K26671 GARRE1; granule associated Rac and RHOG effector protein 1 
K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-] 
K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] 
K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 
K14443 TOB; protein Tob/BTG 
K14443 TOB; protein Tob/BTG 
K14443 TOB; protein Tob/BTG 
K14443 TOB; protein Tob/BTG 
K14443 TOB; protein Tob/BTG 
K14443 TOB; protein Tob/BTG 
K14443 TOB; protein Tob/BTG 
K14443 TOB; protein Tob/BTG 
K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter 
K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter 
K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
K12615 EDC3; enhancer of mRNA-decapping protein 3 
K12616 EDC4; enhancer of mRNA-decapping protein 4 
K18760 NANOS2; protein nanos 2 
K18761 NANOS3; protein nanos 3 
K14327 UPF2; regulator of nonsense transcripts 2 
K14328 UPF3; regulator of nonsense transcripts 3 
K14328 UPF3; regulator of nonsense transcripts 3 
K10651 TRIM21; tripartite motif-containing protein 21 [EC:2.3.2.27] 
K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] 
K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
K16195 EIF2AK2; eukaryotic translation initiation factor 2-alpha kinase 2 [EC:2.7.11.1] 
K18762 ZAR1; zygote arrest protein 1 
K18762 ZAR1; zygote arrest protein 1 
K20102 YTHDF; YTH domain-containing family protein 
K20102 YTHDF; YTH domain-containing family protein 
K20102 YTHDF; YTH domain-containing family protein 
       Stress granule specific factors
   mRNA degradation factors
 
 Prokaryotic type

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Last updated: April 9, 2024