Transfer RNA Biogenesis - Hyphomonas neptunium

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 Eukaryotic type
   5'processing factors
   3'processing and CCA adding factors
   tRNA spricing factors
   tRNA transport factors
   Aminoacyl-tRNA synthetases (AARSs)
   tRNA modification factors
     Deaminases
     Dihydorouridine synthases
     Methylthiotransferase
     Methyltransferases
     Psudouridine synthases
     Thiolation factors
       HNE_2620 class-V pyridoxal-phosphate-dependent aminotransferase, NifS/IscS family
K04487 iscS; cysteine desulfurase [EC:2.8.1.7] 
     KEOPS/EKC complex
     Elongator complex
     Elongator related proteins
     Other tRNA modification factors
   tRNA degradation factors
 
 Prokaryotic type
   5'processing factors
   3'processing and CCA adding factors
   tRNA spricing factors
   tRNA transport factors
   Aminoacyl-tRNA synthetases (AARSs)
   tRNA modification factors
     Deaminases
     Dihydorouridine synthases
     Methylthiotransferases
     Methyltransferases
     Psudouridine synthases
     Thiolation factors
       HNE_0641 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
       HNE_2769 PP-loop family protein
       HNE_2612 iscA; iron-sulfur cluster assembly accessory protein
       HNE_2620 class-V pyridoxal-phosphate-dependent aminotransferase, NifS/IscS family
       HNE_0861 putative aminomethyltransferase
K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] 
K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA 
K13628 iscA; iron-sulfur cluster assembly protein 
K04487 iscS; cysteine desulfurase [EC:2.8.1.7] 
K06980 ygfZ; tRNA-modifying protein YgfZ 
     KEOPS/EKC complex
     Other tRNA modification factors
   tRNA degradation factors

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Last updated: February 29, 2024