KEGG Organisms

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 Eukaryotes (541)
 
   Animals (250)
     Vertebrates (146)
       Mammals (66)
         hsa  Homo sapiens (human)
         ptr  Pan troglodytes (chimpanzee)
         pps  Pan paniscus (bonobo)
         ggo  Gorilla gorilla gorilla (western lowland gorilla)
         pon  Pongo abelii (Sumatran orangutan)
         nle  Nomascus leucogenys (northern white-cheeked gibbon)
         mcc  Macaca mulatta (rhesus monkey)
         mcf  Macaca fascicularis (crab-eating macaque)
         csab  Chlorocebus sabaeus (green monkey)
         rro  Rhinopithecus roxellana (golden snub-nosed monkey)
         rbb  Rhinopithecus bieti (black snub-nosed monkey)
         cjc  Callithrix jacchus (white-tufted-ear marmoset)
         sbq  Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
         mmu  Mus musculus (mouse)
         mcal  Mus caroli (Ryukyu mouse)
         mpah  Mus pahari (shrew mouse)
         rno  Rattus norvegicus (rat)
         mun  Meriones unguiculatus (Mongolian gerbil)
         cge  Cricetulus griseus (Chinese hamster)
         ngi  Nannospalax galili (Upper Galilee mountains blind mole rat)
         hgl  Heterocephalus glaber (naked mole rat)
         ccan  Castor canadensis (American beaver)
         ocu  Oryctolagus cuniculus (rabbit)
         tup  Tupaia chinensis (Chinese tree shrew)
         cfa  Canis familiaris (dog)
         vvp  Vulpes vulpes (red fox)
         aml  Ailuropoda melanoleuca (giant panda)
         umr  Ursus maritimus (polar bear)
         uah  Ursus arctos horribilis
         oro  Odobenus rosmarus divergens (Pacific walrus)
         elk  Enhydra lutris kenyoni (northern sea otter)
         fca  Felis catus (domestic cat)
         ptg  Panthera tigris altaica (Amur tiger)
         ppad  Panthera pardus (leopard)
         aju  Acinonyx jubatus (cheetah)
         bta  Bos taurus (cow)
         bom  Bos mutus (wild yak)
         biu  Bos indicus (zebu cattle)
         bbub  Bubalus bubalis (water buffalo)
         chx  Capra hircus (goat)
         oas  Ovis aries (sheep)
         ssc  Sus scrofa (pig)
         cfr  Camelus ferus (Wild Bactrian camel)
         cdk  Camelus dromedarius (Arabian camel)
         bacu  Balaenoptera acutorostrata scammoni (minke whale)
         lve  Lipotes vexillifer (Yangtze River dolphin)
         oor  Orcinus orca (killer whale)
         dle  Delphinapterus leucas (beluga whale)
         pcad  Physeter catodon (sperm whale)
         ecb  Equus caballus (horse)
         epz  Equus przewalskii (Przewalski's horse)
         eai  Equus asinus (ass)
         myb  Myotis brandtii (Brandt's bat)
         myd  Myotis davidii
         mna  Miniopterus natalensis
         hai  Hipposideros armiger (great roundleaf bat)
         dro  Desmodus rotundus (common vampire bat)
         pale  Pteropus alecto (black flying fox)
         ray  Rousettus aegyptiacus (Egyptian rousette)
         mjv  Manis javanica (Malayan pangolin)
         lav  Loxodonta africana (African savanna elephant)
         tmu  Trichechus manatus latirostris (Florida manatee)
         mdo  Monodelphis domestica (opossum)
         shr  Sarcophilus harrisii (Tasmanian devil)
         pcw  Phascolarctos cinereus (koala)
         oaa  Ornithorhynchus anatinus (platypus)
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       Birds (24)
         gga  Gallus gallus (chicken)
         mgp  Meleagris gallopavo (turkey)
         cjo  Coturnix japonica (Japanese quail)
         nmel  Numida meleagris (helmeted guineafowl)
         apla  Anas platyrhynchos (mallard)
         acyg  Anser cygnoides domesticus (swan goose)
         tgu  Taeniopygia guttata (zebra finch)
         lsr  Lonchura striata domestica (Bengalese finch)
         scan  Serinus canaria (common canary)
         gfr  Geospiza fortis (medium ground-finch)
         fab  Ficedula albicollis (collared flycatcher)
         phi  Pseudopodoces humilis (Tibetan ground-tit)
         pmaj  Parus major (Great Tit)
         ccae  Cyanistes caeruleus (blue tit)
         ccw  Corvus cornix (hooded crow)
         etl  Empidonax traillii (willow flycatcher)
         fpg  Falco peregrinus (peregrine falcon)
         fch  Falco cherrug (Saker falcon)
         clv  Columba livia (rock pigeon)
         egz  Egretta garzetta (little egret)
         nni  Nipponia nippon (crested ibis)
         acun  Athene cunicularia (burrowing owl)
         padl  Pygoscelis adeliae (Adelie penguin)
         aam  Apteryx mantelli mantelli (brown kiwi)
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       Reptiles (12)
         asn  Alligator sinensis (Chinese alligator)
         amj  Alligator mississippiensis (American alligator)
         pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
         cmy  Chelonia mydas (green sea turtle)
         cpic  Chrysemys picta (western painted turtle)
         acs  Anolis carolinensis (green anole)
         pvt  Pogona vitticeps (central bearded dragon)
         pbi  Python bivittatus (Burmese python)
         pmur  Protobothrops mucrosquamatus (Taiwan habu)
         tsr  Thamnophis sirtalis
         pmua  Podarcis muralis (common wall lizard)
         gja  Gekko japonicus
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       Amphibians (3)
         xla  Xenopus laevis (African clawed frog)
         xtr  Xenopus tropicalis (western clawed frog)
         npr  Nanorana parkeri
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       Fishes (39)
         dre  Danio rerio (zebrafish)
         srx  Sinocyclocheilus rhinocerous
         sanh  Sinocyclocheilus anshuiensis
         sgh  Sinocyclocheilus grahami
         ccar  Cyprinus carpio (common carp)
         ipu  Ictalurus punctatus (channel catfish)
         phyp  Pangasianodon hypophthalmus (striped catfish)
         amex  Astyanax mexicanus (Mexican tetra)
         eee  Electrophorus electricus (electric eel)
         tru  Takifugu rubripes (torafugu)
         tng  Tetraodon nigroviridis (spotted green pufferfish)
         lco  Larimichthys crocea (large yellow croaker)
         ncc  Notothenia coriiceps (black rockcod)
         mze  Maylandia zebra (zebra mbuna)
         onl  Oreochromis niloticus (Nile tilapia)
         ola  Oryzias latipes (Japanese medaka)
         xma  Xiphophorus maculatus (southern platyfish)
         xco  Xiphophorus couchianus (Monterrey platyfish)
         pret  Poecilia reticulata (guppy)
         cvg  Cyprinodon variegatus (sheepshead minnow)
         nfu  Nothobranchius furzeri (turquoise killifish)
         kmr  Kryptolebias marmoratus (mangrove rivulus)
         alim  Austrofundulus limnaeus (annual killifish)
         aoce  Amphiprion ocellaris (clown anemonefish)
         csem  Cynoglossus semilaevis (tongue sole)
         pov  Paralichthys olivaceus (Japanese flounder)
         lcf  Lates calcarifer (barramundi perch)
         sdu  Seriola dumerili (greater amberjack)
         slal  Seriola lalandi dorsalis (Yellowtail amberjack)
         hcq  Hippocampus comes (tiger tail seahorse)
         bpec  Boleophthalmus pectinirostris (great blue-spotted mudskipper)
         malb  Monopterus albus (swamp eel)
         sasa  Salmo salar (Atlantic salmon)
         otw  Oncorhynchus tshawytscha (Chinook salmon)
         salp  Salvelinus alpinus (Arctic char)
         els  Esox lucius (northern pike)
         sfm  Scleropages formosus (Asian bonytongue)
         pki  Paramormyrops kingsleyae
         lcm  Latimeria chalumnae (coelacanth)
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       Cartilaginous fishes (2)
         cmk  Callorhinchus milii (elephant shark)
         rtp  Rhincodon typus (whale shark)
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     Lancelets (1)
       bfo  Branchiostoma floridae (Florida lancelet)
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     Ascidians (1)
       cin  Ciona intestinalis (sea squirt)
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     Echinoderms (2)
       spu  Strongylocentrotus purpuratus (purple sea urchin)
       aplc  Acanthaster planci (crown-of-thorns starfish)
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     Hemichordates (1)
       sko  Saccoglossus kowalevskii (acorn worm)
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     Arthropods (72)
       Insects (65)
         dme  Drosophila melanogaster (fruit fly)
         der  Drosophila erecta
         dse  Drosophila sechellia
         dsi  Drosophila simulans
         dya  Drosophila yakuba
         dan  Drosophila ananassae
         dsr  Drosophila serrata
         dpo  Drosophila pseudoobscura pseudoobscura
         dpe  Drosophila persimilis
         dmn  Drosophila miranda
         dwi  Drosophila willistoni
         dgr  Drosophila grimshawi
         dmo  Drosophila mojavensis
         daz  Drosophila arizonae
         dnv  Drosophila navojoa
         dhe  Drosophila hydei
         dvi  Drosophila virilis
         mde  Musca domestica (house fly)
         lcq  Lucilia cuprina (Australian sheep blowfly)
         aga  Anopheles gambiae (mosquito)
         aag  Aedes aegypti (yellow fever mosquito)
         aalb  Aedes albopictus (Asian tiger mosquito)
         cqu  Culex quinquefasciatus (southern house mosquito)
         ame  Apis mellifera (honey bee)
         bim  Bombus impatiens (common eastern bumble bee)
         bter  Bombus terrestris (buff-tailed bumblebee)
         ccal  Ceratina calcarata (carpenter bee)
         obb  Osmia bicornis bicornis
         soc  Solenopsis invicta (red fire ant)
         mpha  Monomorium pharaonis (pharaoh ant)
         aec  Acromyrmex echinatior (Panamanian leafcutter ant)
         acep  Atta cephalotes (leaf cutting ant)
         pbar  Pogonomyrmex barbatus (red harvester ant)
         vem  Vollenhovia emeryi
         hst  Harpegnathos saltator (Jerdon's jumping ant)
         dqu  Dinoponera quadriceps
         cfo  Camponotus floridanus (Florida carpenter ant)
         lhu  Linepithema humile (Argentine ant)
         pgc  Pseudomyrmex gracilis
         obo  Ooceraea biroi (clonal raider ant)
         pcf  Polistes canadensis
         nvi  Nasonia vitripennis (jewel wasp)
         csol  Ceratosolen solmsi marchali
         mdl  Microplitis demolitor
         tca  Tribolium castaneum (red flour beetle)
         dpa  Dendroctonus ponderosae (mountain pine beetle)
         atd  Aethina tumida (small hive beetle)
         nvl  Nicrophorus vespilloides
         bmor  Bombyx mori (domestic silkworm)
         bman  Bombyx mandarina (wild silkworm)
         dpl  Danaus plexippus (monarch butterfly)
         pmac  Papilio machaon (common yellow swallowtail)
         prap  Pieris rapae (cabbage white)
         haw  Helicoverpa armigera (cotton bollworm)
         tnl  Trichoplusia ni (cabbage looper)
         pxy  Plutella xylostella (diamondback moth)
         api  Acyrthosiphon pisum (pea aphid)
         dnx  Diuraphis noxia (Russian wheat aphid)
         ags  Aphis gossypii (cotton aphid)
         rmd  Rhopalosiphum maidis (corn leaf aphid)
         btab  Bemisia tabaci (sweet potato whitefly)
         clec  Cimex lectularius (bed bug)
         phu  Pediculus humanus corporis (human body louse)
         zne  Zootermopsis nevadensis
         fcd  Folsomia candida
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       Crustaceans (2)
         dpx  Daphnia pulex (common water flea)
         pvm  Penaeus vannamei (Pacific white shrimp)
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       Chelicerates (5)
         isc  Ixodes scapularis (black-legged tick)
         tut  Tetranychus urticae (two-spotted spider mite)
         dpte  Dermatophagoides pteronyssinus (European house dust mite)
         cscu  Centruroides sculpturatus (bark scorpion)
         ptep  Parasteatoda tepidariorum (common house spider)
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     Nematodes (6)
       cel  Caenorhabditis elegans (nematode)
       cbr  Caenorhabditis briggsae
       bmy  Brugia malayi (filaria)
       loa  Loa loa (eye worm)
       nai  Necator americanus
       tsp  Trichinella spiralis
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     Annelids (1)
       hro  Helobdella robusta
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     Mollusks (5)
       lgi  Lottia gigantea (owl limpet)
       pcan  Pomacea canaliculata (golden apple snail)
       crg  Crassostrea gigas (Pacific oyster)
       myi  Mizuhopecten yessoensis (Yesso scallop)
       obi  Octopus bimaculoides
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     Brachiopodas (1)
       lak  Lingula anatina
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     Flatworms (4)
       smm  Schistosoma mansoni
       shx  Schistosoma haematobium
       ovi  Opisthorchis viverrini
       egl  Echinococcus granulosus
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     Cnidarians (8)
       nve  Nematostella vectensis (sea anemone)
       epa  Exaiptasia pallida
       adf  Acropora digitifera (stony coral)
       amil  Acropora millepora
       pdam  Pocillopora damicornis (lace coral)
       spis  Stylophora pistillata
       dgt  Dendronephthya gigantea (soft corals)
       hmg  Hydra vulgaris
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     Placozoans (1)
       tad  Trichoplax adhaerens
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     Poriferans (1)
       aqu  Amphimedon queenslandica (sponge)
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   Plants (106)
     Eudicots (75)
       Mustard family (9)
         ath  Arabidopsis thaliana (thale cress)
         aly  Arabidopsis lyrata (lyrate rockcress)
         crb  Capsella rubella
         csat  Camelina sativa (false flax)
         eus  Eutrema salsugineum
         brp  Brassica rapa (field mustard)
         bna  Brassica napus (rape)
         boe  Brassica oleracea (wild cabbage)
         rsz  Raphanus sativus (radish)
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       Caper family (1)
         thj  Tarenaya hassleriana (spider flower)
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       Papaya family (1)
         cpap  Carica papaya (papaya)
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       Rue family (2)
         cit  Citrus sinensis (Valencia orange)
         cic  Citrus clementina (mandarin orange)
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       Mallow family (5)
         tcc  Theobroma cacao (cacao)
         gra  Gossypium raimondii
         ghi  Gossypium hirsutum (upland cotton)
         gab  Gossypium arboreum
         dzi  Durio zibethinus (durian)
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       Myrtle family (1)
         egr  Eucalyptus grandis (rose gum)
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       Pea family (13)
         gmx  Glycine max (soybean)
         gsj  Glycine soja (wild soybean)
         pvu  Phaseolus vulgaris (common bean)
         vra  Vigna radiata (mung bean)
         var  Vigna angularis (adzuki bean)
         vun  Vigna unguiculata (cowpea)
         ccaj  Cajanus cajan (pigeon pea)
         mtr  Medicago truncatula (barrel medic)
         cam  Cicer arietinum (chickpea)
         lja  Lotus japonicus
         adu  Arachis duranensis
         aip  Arachis ipaensis
         lang  Lupinus angustifolius (narrow-leaved blue lupine)
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       Rose family (7)
         fve  Fragaria vesca (woodland strawberry)
         rcn  Rosa chinensis (China rose)
         pper  Prunus persica (peach)
         pmum  Prunus mume (Japanese apricot)
         pavi  Prunus avium (sweet cherry)
         mdm  Malus domestica (apple)
         pxb  Pyrus x bretschneideri (Chinese white pear)
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       Buckthorn family (1)
         zju  Ziziphus jujuba (Chinese jujube)
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       Cucumber family (6)
         csv  Cucumis sativus (cucumber)
         cmo  Cucumis melo (muskmelon)
         mcha  Momordica charantia (bitter melon)
         cmax  Cucurbita maxima (winter squash)
         cmos  Cucurbita moschata (crookneck pumpkin)
         cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
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       Spurge family (4)
         rcu  Ricinus communis (castor bean)
         jcu  Jatropha curcas
         hbr  Hevea brasiliensis (rubber tree)
         mesc  Manihot esculenta (cassava)
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       Willow family (2)
         pop  Populus trichocarpa (black cottonwood)
         peu  Populus euphratica (Euphrates poplar)
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       Walnut family (1)
         jre  Juglans regia (English walnut)
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       Beech family (1)
         qsu  Quercus suber (cork oak)
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       Grape family (1)
         vvi  Vitis vinifera (wine grape)
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       Nightshade family (8)
         sly  Solanum lycopersicum (tomato)
         spen  Solanum pennellii
         sot  Solanum tuberosum (potato)
         cann  Capsicum annuum
         nta  Nicotiana tabacum (common tobacco)
         nsy  Nicotiana sylvestris
         nto  Nicotiana tomentosiformis
         nau  Nicotiana attenuata
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       Morning-glory family (1)
         ini  Ipomoea nil (Japanese morning glory)
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       Sesame family (1)
         sind  Sesamum indicum (sesame)
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       Olive family (1)
         oeu  Olea europaea var. sylvestris (wild olive)
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       Daisy family (3)
         han  Helianthus annuus (common sunflower)
         lsv  Lactuca sativa (garden lettuce)
         ccav  Cynara cardunculus var. scolymus (artichoke)
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       Parsley family (1)
         dcr  Daucus carota (carrot)
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       Amaranth family (3)
         bvg  Beta vulgaris (sugar beet)
         soe  Spinacia oleracea (spinach)
         cqi  Chenopodium quinoa (quinoa)
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       Lotus family (1)
         nnu  Nelumbo nucifera (sacred lotus)
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       Poppy family (1)
         psom  Papaver somniferum (opium poppy)
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     Monocots (14)
       Grass family (8)
         osa  Oryza sativa japonica (Japanese rice) (RefSeq)
         dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
         obr  Oryza brachyantha (malo sina)
         bdi  Brachypodium distachyon
         ats  Aegilops tauschii (wheat D)
         sbi  Sorghum bicolor (sorghum)
         zma  Zea mays (maize)
         sita  Setaria italica (foxtail millet)
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       Palm family (2)
         pda  Phoenix dactylifera (date palm)
         egu  Elaeis guineensis (African oil palm)
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       Banana family (1)
         mus  Musa acuminata (wild Malaysian banana)
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       Orchid family (2)
         dct  Dendrobium catenatum
         peq  Phalaenopsis equestris
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       Asparagus family (1)
         aof  Asparagus officinalis (garden asparagus)
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     Basal Magnoliophyta (1)
       Amborella family (1)
         atr  Amborella trichopoda
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     Ferns (1)
       smo  Selaginella moellendorffii
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     Mosses (1)
       ppp  Physcomitrium patens
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     Green algae (11)
       cre  Chlamydomonas reinhardtii
       vcn  Volvox carteri f. nagariensis
       mng  Monoraphidium neglectum
       csl  Coccomyxa subellipsoidea
       cvr  Chlorella variabilis
       apro  Auxenochlorella protothecoides
       ota  Ostreococcus tauri
       mis  Micromonas commoda
       mpp  Micromonas pusilla
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     Red algae (3)
       cme  Cyanidioschyzon merolae
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   Fungi (133)
     Ascomycetes (95)
       Saccharomycetes (32)
         sce  Saccharomyces cerevisiae (budding yeast)
         ago  Ashbya gossypii (Eremothecium gossypii)
         erc  Eremothecium cymbalariae
         kla  Kluyveromyces lactis
         kmx  Kluyveromyces marxianus
         lth  Lachancea thermotolerans
         vpo  Vanderwaltozyma polyspora
         zro  Zygosaccharomyces rouxii
         cgr  Candida glabrata
         ncs  Naumovozyma castellii
         ndi  Naumovozyma dairenensis
         tpf  Tetrapisispora phaffii
         tbl  Tetrapisispora blattae
         tdl  Torulaspora delbrueckii
         kaf  Kazachstania africana
         ppa  Komagataella phaffii
         dha  Debaryomyces hansenii
         pic  Scheffersomyces stipitis
         pgu  Meyerozyma guilliermondii
         spaa  Spathaspora passalidarum
         lel  Lodderomyces elongisporus
         cal  Candida albicans
         ctp  Candida tropicalis
         cot  Candida orthopsilosis
         cdu  Candida dubliniensis
         cten  Yamadazyma tenuis
         yli  Yarrowia lipolytica
         clu  Clavispora lusitaniae ATCC 42720
         clus  Clavispora lusitaniae CBS 6936
         caur  Candida auris
         slb  Sugiyamaella lignohabitans
         pkz  Pichia kudriavzevii
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       Sordariomycetes (27)
         ncr  Neurospora crassa
         nte  Neurospora tetrasperma
         smp  Sordaria macrospora
         pan  Podospora anserina
         ttt  Thermothielavioides terrestris
         mtm  Thermothelomyces thermophilus
         cthr  Chaetomium thermophilum
         mgr  Pyricularia oryzae
         tmn  Phaeoacremonium minimum
         ssck  Sporothrix schenckii
         fgr  Fusarium graminearum
         fpu  Fusarium pseudograminearum
         fvr  Fusarium verticillioides
         fox  Fusarium oxysporum
         nhe  Nectria haematococca
         tre  Trichoderma reesei QM6a
         trr  Trichoderma reesei RUT C-30
         maw  Metarhizium acridum
         maj  Metarhizium robertsii
         cmt  Cordyceps militaris
         plj  Purpureocillium lilacinum
         val  Verticillium alfalfae
         vda  Verticillium dahliae
         cfj  Colletotrichum fioriniae
         sapo  Scedosporium apiospermum
         ela  Eutypa lata
         pfy  Pestalotiopsis fici
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       Leotiomycetes (5)
         ssl  Sclerotinia sclerotiorum
         bfu  Botrytis cinerea
         mbe  Marssonina brunnea
         psco  Phialocephala scopiformis
         glz  Glarea lozoyensis
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       Eurotiomycetes (19)
         ani  Aspergillus nidulans
         afm  Aspergillus fumigatus
         act  Aspergillus clavatus
         nfi  Aspergillus fischeri
         aor  Aspergillus oryzae
         ang  Aspergillus niger
         afv  Aspergillus flavus
         pcs  Penicillium rubens
         pdp  Penicillium digitatum
         tmf  Talaromyces marneffei
         cim  Coccidioides immitis
         cpw  Coccidioides posadasii
         pbl  Paracoccidioides lutzii Pb01
         pbn  Paracoccidioides brasiliensis
         ure  Uncinocarpus reesii
         abe  Trichophyton benhamiae
         tve  Trichophyton verrucosum
         aje  Histoplasma capsulatum
         bgh  Blastomyces gilchristii
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       Dothideomycetes (10)
         pno  Parastagonospora nodorum
         pte  Pyrenophora teres
         bze  Bipolaris zeicola
         bsc  Bipolaris sorokiniana
         bor  Bipolaris oryzae
         aalt  Alternaria alternata
         ztr  Zymoseptoria tritici
         pfj  Pseudocercospora fijiensis
         bcom  Baudoinia panamericana
         npa  Neofusicoccum parvum
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       Pezizomycetes (1)
         tml  Tuber melanosporum
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       Schizosaccharomycetes (1)
         spo  Schizosaccharomyces pombe (fission yeast)
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     Basidiomycetes (33)
       cne  Cryptococcus neoformans var. neoformans JEC21
       cnb  Cryptococcus neoformans var. neoformans B-3501A
       cgi  Cryptococcus gattii
       tms  Tremella mesenterica
       tasa  Trichosporon asahii var. asahii
       ppl  Postia placenta
       tvs  Trametes versicolor
       dsq  Dichomitus squalens
       pco  Phanerochaete carnosa
       shs  Stereum hirsutum
       hir  Heterobasidion irregulare
       psq  Punctularia strigosozonata
       adl  Auricularia subglabra
       fme  Fomitiporia mediterranea
       gtr  Gloeophyllum trabeum
       mpr  Moniliophthora perniciosa
       mrr  Moniliophthora roreri
       cci  Coprinopsis cinerea
       scm  Schizophyllum commune
       abp  Agaricus bisporus var. burnettii JB137-S8
       abv  Agaricus bisporus var. bisporus H97
       cput  Coniophora puteana
       sla  Serpula lacrymans
       wse  Wallemia mellicola
       wic  Wallemia ichthyophaga
       uma  Ustilago maydis
       pfp  Anthracocystis flocculosa
       mgl  Malassezia globosa
       mrt  Malassezia restricta
       msym  Malassezia sympodialis
       pgr  Puccinia graminis
       mlr  Melampsora larici-populina
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     Microsporidians (5)
       ecu  Encephalitozoon cuniculi
       ein  Encephalitozoon intestinalis
       ehe  Encephalitozoon hellem
       ero  Encephalitozoon romaleae
       nce  Nosema ceranae
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   Protists (52)
     Choanoflagellates (2)
       mbr  Monosiga brevicollis
       sre  Salpingoeca rosetta
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     Amoebozoa (7)
       Dictyostelia (3)
         ddi  Dictyostelium discoideum (cellular slime mold)
         dpp  Dictyostelium purpureum (cellular slime mold)
         dfa  Cavenderia fasciculata (cellular slime mold)
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       Entamoeba (3)
         ehi  Entamoeba histolytica
         edi  Entamoeba dispar
         eiv  Entamoeba invadens
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       Acanthamoeba (1)
         acan  Acanthamoeba castellanii
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     Alveolates (21)
       Apicomplexans (18)
         pfa  Plasmodium falciparum 3D7
         pfh  Plasmodium falciparum HB3
         pyo  Plasmodium yoelii
         pcb  Plasmodium chabaudi
         pbe  Plasmodium berghei
         pkn  Plasmodium knowlesi
         pvx  Plasmodium vivax
         pcy  Plasmodium cynomolgi
         tan  Theileria annulata
         tpv  Theileria parva
         tot  Theileria orientalis
         beq  Theileria equi
         bbo  Babesia bovis
         bmic  Babesia microti
         cpv  Cryptosporidium parvum
         cho  Cryptosporidium hominis
         tgo  Toxoplasma gondii
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       Ciliates (2)
         tet  Tetrahymena thermophila
         ptm  Paramecium tetraurelia
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       Dinoflagellates (1)
         smin  Breviolum minutum
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     Stramenopiles (8)
       Diatoms (3)
         pti  Phaeodactylum tricornutum
         fcy  Fragilariopsis cylindrus
         tps  Thalassiosira pseudonana
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       Eustigmatophytes (1)
       Pelagophytes (1)
       Oomycetes (3)
         pif  Phytophthora infestans
         psoj  Phytophthora sojae
         spar  Saprolegnia parasitica
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     Haptophyta (1)
       ehx  Emiliania huxleyi
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     Cryptomonads (1)
     Euglenozoa (9)
       Kinetoplasts (9)
         tbr  Trypanosoma brucei brucei
         tbg  Trypanosoma brucei gambiense
         tcr  Trypanosoma cruzi
         lma  Leishmania major
         lif  Leishmania infantum
         ldo  Leishmania donovani
         lmi  Leishmania mexicana
         lbz  Leishmania braziliensis
         lpan  Leishmania panamensis
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     Heterolobosea (1)
       Tetramitia (1)
         ngr  Naegleria gruberi
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     Metamonada (2)
       Trichomonads (1)
         tva  Trichomonas vaginalis
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       Diplomonads (1)
 
 Prokaryotes (6085)
 
   Bacteria (5762)
     Gammaproteobacteria - Enterobacteria (510)
       Escherichia (69)
         eco  Escherichia coli K-12 MG1655
         ecj  Escherichia coli K-12 W3110
         ecd  Escherichia coli K-12 DH10B
         ebw  Escherichia coli K-12 BW2952
         ecok  Escherichia coli K-12 MDS42
         ece  Escherichia coli O157:H7 EDL933 (EHEC)
         ecs  Escherichia coli O157:H7 Sakai (EHEC)
         ecf  Escherichia coli O157:H7 EC4115 (EHEC)
         etw  Escherichia coli O157:H7 TW14359 (EHEC)
         elx  Escherichia coli O157:H7 Xuzhou21 (EHEC)
         eoi  Escherichia coli O111:H- 11128 (EHEC)
         eoj  Escherichia coli O26:H11 11368 (EHEC)
         eoh  Escherichia coli O103:H2 12009 (EHEC)
         ecoo  Escherichia coli O145:H28 RM13514 (EHEC)
         ecoh  Escherichia coli O145:H28 RM13516 (EHEC)
         esl  Escherichia coli O104:H4 2011C-3493 (EAEC)
         eso  Escherichia coli O104:H4 2009EL-2071 (EAEC)
         esm  Escherichia coli O104:H4 2009EL-2050 (EAEC)
         eck  Escherichia coli 55989 (EAEC)
         ecg  Escherichia coli O127:H6 E2348/69 (EPEC)
         eok  Escherichia coli O55:H7 CB9615 (EPEC)
         elr  Escherichia coli O55:H7 RM12579 (EPEC)
         elh  Escherichia coli O78:H11:K80 H10407 (ETEC)
         ecw  Escherichia coli O139:H28 E24377A (ETEC)
         eun  Escherichia coli UMNK88 (ETEC, porcine)
         ecp  Escherichia coli O6:K15:H31 536 (UPEC)
         ena  Escherichia coli NA114 (UPEC)
         ecos  Escherichia coli O25b:K100:H4-ST131 EC958 (UPEC)
         ecv  Escherichia coli APEC O1 (APEC)
         ecoa  Escherichia coli APEC O78 (APEC)
         ecx  Escherichia coli O9 HS (commensal)
         ecm  Escherichia coli SMS-3-5 (environmental)
         ecy  Escherichia coli O152:H28 SE11 (commensal)
         ecr  Escherichia coli O8 IAI1 (commensal)
         ecq  Escherichia coli O81 ED1a (commensal)
         eum  Escherichia coli O17:K52:H18 UMN026 (ExPEC)
         ect  Escherichia coli O7:K1 IAI39 (ExPEC)
         eoc  Escherichia coli O7:K1 CE10
         ebr  Escherichia coli B REL606
         ebl  Escherichia coli BL21(DE3)
         ebe  Escherichia coli BL21(DE3)
         ebd  Escherichia coli BL21-Gold(DE3)pLysS AG
         eci  Escherichia coli O18:K1:H7 UTI89 (UPEC)
         eih  Escherichia coli O18:K1:H7 IHE3034 (ExPEC)
         ecz  Escherichia coli O45:K1:H7 S88 (ExPEC)
         ecc  Escherichia coli O6:K2:H1 CFT073 (UPEC)
         elo  Escherichia coli O44:H18 042 (EAEC)
         eln  Escherichia coli O83:H1 NRG 857C (AIEC)
         ese  Escherichia coli O150:H5 SE15 (commensal)
         ecl  Escherichia coli ATCC 8739
         eko  Escherichia coli KO11FL
         ekf  Escherichia coli KO11FL
         eab  Escherichia coli ABU 83972
         edh  Escherichia coli DH1
         edj  Escherichia coli DH1
         elu  Escherichia coli UM146
         elw  Escherichia coli W
         ell  Escherichia coli W
         elc  Escherichia coli clone D i14
         eld  Escherichia coli clone D i2
         elp  Escherichia coli P12b
         elf  Escherichia coli LF82
         ecol  Escherichia coli LY180
         ecoi  Escherichia coli PMV-1
         ecoj  Escherichia coli JJ1886
         esz  Escherichia sp. E4742
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       Salmonella (54)
         sty  Salmonella enterica subsp. enterica serovar Typhi CT18
         stt  Salmonella enterica subsp. enterica serovar Typhi Ty2
         sex  Salmonella enterica subsp. enterica serovar Typhi P-stx-12
         sent  Salmonella enterica subsp. enterica serovar Typhi Ty21a
         stm  Salmonella enterica subsp. enterica serovar Typhimurium LT2
         seo  Salmonella enterica subsp. enterica serovar Typhimurium 14028S
         sev  Salmonella enterica subsp. enterica serovar Typhimurium D23580
         sey  Salmonella enterica subsp. enterica serovar Typhimurium SL1344
         sem  Salmonella enterica subsp. enterica serovar Typhimurium T000240
         sej  Salmonella enterica subsp. enterica serovar Typhimurium UK-1
         seb  Salmonella enterica subsp. enterica serovar Typhimurium ST4/74
         sef  Salmonella enterica subsp. enterica serovar Typhimurium 798
         setu  Salmonella enterica subsp. enterica serovar Typhimurium U288
         setc  Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921
         senr  Salmonella enterica subsp. enterica serovar Typhimurium DT2
         send  Salmonella enterica subsp. enterica serovar Typhimurium DT104
         seni  Salmonella enterica subsp. enterica serovar Typhimurium 138736
         seen  Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736
         spt  Salmonella enterica subsp. enterica serovar Paratyphi A ATCC9150
         sek  Salmonella enterica subsp. enterica serovar Paratyphi A AKU12601
         spq  Salmonella enterica subsp. enterica serovar Paratyphi B
         sei  Salmonella enterica subsp. enterica serovar Paratyphi C
         sec  Salmonella enterica subsp. enterica serovar Choleraesuis
         seh  Salmonella enterica subsp. enterica serovar Heidelberg SL476
         shb  Salmonella enterica subsp. enterica serovar Heidelberg B182
         senh  Salmonella enterica subsp. enterica serovar Heidelberg CFSAN002069
         seeh  Salmonella enterica subsp. enterica serovar Heidelberg 41578
         see  Salmonella enterica subsp. enterica serovar Newport SL254
         senn  Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1
         sew  Salmonella enterica subsp. enterica serovar Schwarzengrund
         sea  Salmonella enterica subsp. enterica serovar Agona SL483
         sens  Salmonella enterica subsp. enterica serovar Agona 24249
         sed  Salmonella enterica subsp. enterica serovar Dublin
         seg  Salmonella enterica subsp. enterica serovar Gallinarum 287/91
         sel  Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078
         sega  Salmonella enterica subsp. enterica serovar Gallinarum/pullorum CDC1983-67
         set  Salmonella enterica subsp. enterica serovar Enteritidis P125109
         sena  Salmonella enterica subsp. enterica serovar Enteritidis EC20090135
         seno  Salmonella enterica subsp. enterica serovar Enteritidis EC20090193
         senv  Salmonella enterica subsp. enterica serovar Enteritidis EC20090332
         senq  Salmonella enterica subsp. enterica serovar Enteritidis EC20090531
         senl  Salmonella enterica subsp. enterica serovar Enteritidis OLF-SE1-1019-1
         senj  Salmonella enterica subsp. enterica serovar Javiana
         seec  Salmonella enterica subsp. enterica serovar Cubana
         seeb  Salmonella enterica subsp. enterica serovar Bareilly
         seep  Salmonella enterica subsp. enterica serovar Pullorum
         senb  Salmonella enterica subsp. enterica serovar Bovismorbificans
         sene  Salmonella enterica subsp. enterica serovar Thompson
         senc  Salmonella enterica subsp. enterica serovar Tennessee
         ses  Salmonella enterica subsp. arizonae
         salz  Salmonella sp. SSDFZ69
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       Shigella (13)
         ssn  Shigella sonnei Ss046
         sbo  Shigella boydii Sb227 (serotype 4)
         sdy  Shigella dysenteriae Sd197
         sdz  Shigella dysenteriae 1617 (serotype 1)
         shq  Shigella sp. PAMC 28760
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       Enterobacter (31)
         enc  Enterobacter cloacae subsp. cloacae ATCC 13047
         eclo  Enterobacter cloacae subsp. cloacae NCTC 9394
         enl  Enterobacter cloacae subsp. dissolvens SDM
         eclg  Enterobacter cloacae GGT036
         ecle  Enterobacter cloacae ECNIH2
         ecln  Enterobacter cloacae ECNIH4
         ecli  Enterobacter cloacae ECNIH5
         eclx  Enterobacter hormaechei subsp. xiangfangensis
         ecly  Enterobacter hormaechei subsp. steigerwaltii
         eclz  Enterobacter hormaechei subsp. hormaechei
         ehm  Enterobacter hormaechei CAV1176
         exf  Enterobacter hormaechei subsp. xiangfangensis
         ecla  Enterobacter hormaechei subsp. hoffmannii ECNIH3
         eclc  Enterobacter hormaechei subsp. hoffmannii ECR091
         eau  Enterobacter asburiae L1
         eno  Enterobacter kobei ENHKU01
         eec  Enterobacter ludwigii EcWSU1
         elg  Enterobacter ludwigii EN-119
         ecan  Enterobacter cancerogenus
         ern  Enterobacter roggenkampii
         ecls  Enterobacter cloacae complex sp. 35734
         echg  Enterobacter chengduensis
         esh  Enterobacter sichuanensis
         ent  Enterobacter sp. 638
         eas  Enterobacter soli
         enr  Enterobacter sp. R4-368
         enx  Enterobacter sp. E20
         enf  Enterobacter sp. FY-07
         ebg  Enterobacter bugandensis
         end  Enterobacter sp. ODB01
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       Cronobacter (11)
         csj  Cronobacter sakazakii ATCC 29544
         ccon  Cronobacter condimenti
         cdm  Cronobacter dublinensis
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       Klebsiella (42)
         kpn  Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (serotype K52)
         kpu  Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 (serotype K1)
         kpm  Klebsiella pneumoniae subsp. pneumoniae HS11286
         kpp  Klebsiella pneumoniae subsp. pneumoniae 1084 (serotype K1)
         kph  Klebsiella pneumoniae subsp. pneumoniae KPNIH24
         kpz  Klebsiella pneumoniae subsp. pneumoniae KPNIH27
         kpv  Klebsiella pneumoniae subsp. pneumoniae KPNIH29
         kpw  Klebsiella pneumoniae subsp. pneumoniae KPNIH30
         kpy  Klebsiella pneumoniae subsp. pneumoniae KPNIH31
         kpg  Klebsiella pneumoniae subsp. pneumoniae KPNIH32
         kpc  Klebsiella pneumoniae subsp. pneumoniae KPNIH10
         kpq  Klebsiella pneumoniae subsp. pneumoniae KPR0928
         kpt  Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 KPPR1
         kpo  Klebsiella pneumoniae KCTC 2242
         kpr  Klebsiella pneumoniae subsp. rhinoscleromatis SB3432
         kpj  Klebsiella pneumoniae JM45
         kpi  Klebsiella pneumoniae CG43
         kpa  Klebsiella pneumoniae 30660/NJST258_1
         kps  Klebsiella pneumoniae 30684/NJST258_2
         kpx  Klebsiella pneumoniae PMK1
         kpb  Klebsiella pneumoniae blaNDM-1
         kpne  Klebsiella pneumoniae 32192
         kpnu  Klebsiella pneumoniae 34618
         kpnk  Klebsiella pneumoniae Kp52.145
         kva  Klebsiella variicola At-22
         kpe  Klebsiella variicola 342
         kpk  Klebsiella variicola KP5-1
         kvd  Klebsiella variicola DX120E
         kvq  Klebsiella variicola DSM 15968
         kox  Klebsiella michiganensis KCTC 1686
         koe  Klebsiella michiganensis E718
         koy  Klebsiella michiganensis HKOPL1
         kom  Klebsiella michiganensis M1
         kmi  Klebsiella michiganensis RC10
         kok  Klebsiella oxytoca KONIH1
         koc  Klebsiella oxytoca CAV1374
         kqu  Klebsiella quasipneumoniae
         eae  Klebsiella aerogenes KCTC 2190
         ear  Klebsiella aerogenes EA1509E
         kqv  Klebsiella quasivariicola
         kll  Klebsiella sp. LTGPAF-6F
         klw  Klebsiella huaxiensis
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       Citrobacter (15)
         cko  Citrobacter koseri
         cfd  Citrobacter freundii
         cbra  Citrobacter braakii
         cwe  Citrobacter werkmanii
         cyo  Citrobacter youngae
         cpot  Citrobacter portucalensis
         cfq  Citrobacter freundii complex sp. CFNIH3
         cama  Citrobacter amalonaticus Y19
         caf  Citrobacter amalonaticus FDAARGOS_165
         cif  Citrobacter sp. FDAARGOS_156
         cfar  Citrobacter farmeri
         cir  Citrobacter sp. CFNIH10
         cie  Citrobacter sp. CRE-46
         cpar  Citrobacter pasteurii
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       Gibbsiella (1)
         gqu  Gibbsiella quercinecans
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       Blochmannia (6)
       Hamiltonella (1)
         hde  Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
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       Unclassified aphid symbionts (2)
       Unclassified mealybug symbionts (1)
       Riesia (2)
       Moranella (2)
       Shimwellia (1)
       Raoultella (6)
         ror  Raoultella ornithinolytica B6
         ron  Raoultella ornithinolytica S12
         rpln  Raoultella planticola
         rao  Raoultella sp. X13
         rtg  Raoultella terrigena
         ree  Raoultella electrica
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       Cedecea (4)
         cnt  Cedecea neteri SSMD04
         cem  Cedecea neteri M006
         cen  Cedecea neteri ND14a
         clap  Cedecea lapagei
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       Pluralibacter (3)
         pge  Pluralibacter gergoviae
         esc  Enterobacter lignolyticus SCF1
         kle  Enterobacter lignolyticus G5
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       Kosakonia (5)
         ksa  Kosakonia sacchari
         kor  Kosakonia oryzae
         krd  Kosakonia radicincitans
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       Kluyvera (2)
         kgo  Kluyvera georgiana
         kie  Kluyvera intermedia
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       Ishikawaella (1)
       Leclercia (6)
         lax  Leclercia adecarboxylata
         lei  Leclercia sp. LSNIH1
         leh  Leclercia sp. LSNIH3
         lee  Leclercia sp. W17
         ler  Leclercia sp. 1106151
         lea  Leclercia sp. J807
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       Lelliottia (4)
         laz  Lelliottia amnigena
         lef  Lelliottia jeotgali
         lni  Lelliottia nimipressuralis
         lew  Lelliottia sp. WB101
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       Limnobaculum (1)
       Buttiauxella (1)
         buf  Buttiauxella sp. 3AFRM03
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       Tachikawaea (1)
       Doolittlea (1)
       Hoaglandella (1)
       Gullanella (1)
       Mikella (1)
       Purcelliella (1)
       Metakosakonia (1)
       Atlantibacter (1)
       Izhakiella (1)
         izh  Izhakiella sp. KSNA2
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       Yokenella (1)
         yre  Yokenella regensburgei
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       Scandinavium (1)
       Unclassified Enterobacteria (4)
         ebf  Enterobacteriaceae bacterium FGI 57
         ebu  Enterobacteriaceae bacterium S05
         psts  Plautia stali symbiont
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       Yersinia (46)
         ype  Yersinia pestis CO92 (biovar Orientalis)
         ypk  Yersinia pestis KIM10+ (biovar Mediaevalis)
         yph  Yersinia pestis Harbin 35 (biovar Medievalis)
         ypa  Yersinia pestis Antiqua (biovar Antiqua)
         ypn  Yersinia pestis Nepal516 (biovar Antiqua)
         ypm  Yersinia pestis 91001 (biovar Microtus)
         ypp  Yersinia pestis Pestoides F (biovar Antiqua)
         ypg  Yersinia pestis Angola
         ypz  Yersinia pestis Z176003
         ypt  Yersinia pestis A1122
         ypd  Yersinia pestis D106004
         ypx  Yersinia pestis D182038
         ypw  Yersinia pestis PBM19
         ypj  Yersinia pestis Harbin35
         ypv  Yersinia pestis Shasta
         ypl  Yersinia pestis El Dorado
         yps  Yersinia pseudotuberculosis IP 32953 (serotype I)
         ypo  Yersinia pseudotuberculosis IP 32953 (serotype 1)
         ypi  Yersinia pseudotuberculosis IP 31758 (serotype O:1b)
         ypy  Yersinia pseudotuberculosis YPIII (serotype O:3)
         ypb  Yersinia pseudotuberculosis PB1/+ (serotype 1B)
         ypq  Yersinia pseudotuberculosis ATCC 6904
         ypu  Yersinia pseudotuberculosis MD67
         ypr  Yersinia pseudotuberculosis EP2/+
         ypc  Yersinia pseudotuberculosis 1
         ypf  Yersinia pseudotuberculosis PA3606
         yen  Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0:8)
         yep  Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
         yey  Yersinia enterocolitica subsp. palearctica Y11 (serotype:0:3)
         yel  Yersinia enterocolitica LC20
         yew  Yersinia enterocolitica WA
         yet  Yersinia enterocolitica 2516-87
         yef  Yersinia enterocolitica FORC_002
         yee  Yersinia enterocolitica (type O:5) YE53/03
         ysi  Yersinia similis
         yal  Yersinia aldovae
         yfr  Yersinia frederiksenii
         yin  Yersinia intermedia
         ykr  Yersinia kristensenii
         yru  Yersinia ruckeri YRB
         yrb  Yersinia ruckeri Big Creek 74 (serotype O2)
         yak  Yersinia aleksiciae
         yma  Yersinia massiliensis
         yhi  Yersinia hibernica
         yca  Yersinia canariae
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       Serratia (24)
         smar  Serratia marcescens SM39
         smac  Serratia marcescens subsp. marcescens Db11
         smw  Serratia marcescens WW4
         spe  Serratia proteamaculans
         srr  Serratia plymuthica AS9
         srl  Serratia plymuthica 4Rx13
         sry  Serratia plymuthica S13
         sply  Serratia plymuthica PRI-2C
         srs  Serratia sp. AS12
         sra  Serratia sp. AS13
         smaf  Serratia sp. FGI94
         slq  Serratia liquefaciens
         serf  Serratia sp. FS14
         sers  Serratia sp. SCBI
         sfw  Serratia fonticola DSM 4576
         sfg  Serratia fonticola GS2
         srz  Serratia rubidaea
         sera  Serratia sp. ATCC 39006
         serq  Serratia sp. ATCC 39006
         serm  Serratia sp. MYb239
         squ  Serratia quinivorans
         sfj  Serratia ficaria
         sof  Serratia odorifera
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       Chania (1)
         sfo  Chania multitudinisentens
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       Rahnella (4)
         rah  Rahnella sp. Y9602
         raq  Rahnella aquatilis CIP 78.65 = ATCC 33071
         raa  Rahnella aquatilis HX2
         rox  Rahnella sp. ERMR1:05
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       Fukatsuia (1)
         fsm  Candidatus Fukatsuia symbiotica
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       Pectobacterium (13)
         eca  Pectobacterium atrosepticum SCRI1043
         patr  Pectobacterium atrosepticum JG10-08
         pato  Pectobacterium atrosepticum 21A
         pct  Pectobacterium carotovorum subsp. carotovorum PC1
         pcc  Pectobacterium carotovorum subsp. carotovorum PCC21
         pwa  Pectobacterium parmentieri WPP163
         ppar  Pectobacterium parmentieri RNS08.42.1A
         pec  Pectobacterium parmentieri SCC3193
         pws  Pectobacterium wasabiae
         ppoa  Pectobacterium polaris
         pbra  Pectobacterium brasiliense
         ppuj  Pectobacterium punjabense
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       Sodalis (4)
         sod  Sodalis praecaptivus
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       Dickeya (11)
         ddd  Dickeya dadantii 3937
         dda  Dickeya paradisiaca
         dze  Dickeya chrysanthemi
         ddc  Dickeya zeae Ech586
         dzc  Dickeya zeae EC1
         dso  Dickeya solani IPO 2222
         ced  Dickeya fangzhongdai ND14b
         dfn  Dickeya fangzhongdai DSM 101947
         ddq  Dickeya dianthicola
         dic  Dickeya sp. NCPPB 569
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       Brenneria (3)
       Lonsdalea (1)
         lbq  Lonsdalea britannica
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       Erwinia (11)
         ebi  Erwinia billingiae
         ege  Erwinia gerundensis
         epe  Erwinia persicina
         erwi  Erwinia sp. J780
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       Buchnera (18)
       Wigglesworthia (2)
       Pantoea (17)
         pam  Pantoea ananatis LMG 20103
         plf  Pantoea ananatis LMG 5342
         paj  Pantoea ananatis AJ13355
         paq  Pantoea ananatis PA13
         pva  Pantoea vagans C9-1
         pagg  Pantoea vagans FDAARGOS_160
         pao  Pantoea sp. At-9b
         kln  Pantoea rwandensis
         pagc  Pantoea agglomerans C410P1
         pstw  Pantoea stewartii subsp. stewartii
         pans  Pantoea sp. SO10
         pey  Pantoea eucalypti
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       Mixta (4)
       Tatumella (2)
       Photorhabdus (4)
       Proteus (8)
         pmr  Proteus mirabilis HI4320
         pmib  Proteus mirabilis BB2000
         pvl  Proteus mirabilis CYPV1
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       Xenorhabdus (7)
       Providencia (9)
         prg  Providencia rettgeri
         pala  Providencia alcalifaciens
         phei  Providencia heimbachae
         prq  Providencia sp. WCHPHu000369
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       Morganella (1)
       Arsenophonus (3)
       Edwardsiella (8)
         eic  Edwardsiella ictaluri
         ete  Edwardsiella anguillarum
         edw  Edwardsiella sp. EA181011
         edl  Edwardsiella sp. LADL05-105
         eho  Edwardsiella hoshinae
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       Hafnia (2)
         hav  Hafnia alvei
         hpar  Hafnia paralvei
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       Obesumbacterium (1)
         opo  Obesumbacterium proteus
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       Pragia (2)
       Leminorella (1)
       Phytobacter (2)
       Plesiomonas (1)
     Gammaproteobacteria - Others (837)
       Haemophilus (22)
       Glaesserella (5)
       Histophilus (2)
       Pasteurella (7)
       Basfia (2)
       Mannheimia (15)
       Actinobacillus (10)
       Aggregatibacter (9)
       Gallibacterium (1)
       Bibersteinia (4)
       Avibacterium (2)
       Rodentibacter (2)
       Otariodibacter (1)
       Frederiksenia (1)
       Xylella (9)
       Xanthomonas (38)
         xva  Xanthomonas vasicola
         xhy  Xanthomonas hyacinthi
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       Stenotrophomonas (11)
       Pseudoxanthomonas (3)
       Lysobacter (11)
         lgu  Lysobacter gummosus
         lez  Lysobacter enzymogenes C3
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       Luteimonas (3)
       Thermomonas (2)
       Pseudolysobacter (1)
       Frateuria (1)
       Rhodanobacter (2)
       Dyella (4)
       Dokdonella (1)
       Luteibacter (2)
       Ahniella (1)
       Aerosticca (1)
       Vibrio (53)
         vch  Vibrio cholerae O1 El Tor N16961
         vcf  Vibrio cholerae O1 El Tor FJ147
         vcs  Vibrio cholerae O1 El Tor MS6
         vce  Vibrio cholerae O1 2010EL-1786
         vcq  Vibrio cholerae O1 2012EL-2176
         vcj  Vibrio cholerae O1 MJ-1236
         vci  Vibrio cholerae O1 IEC224
         vco  Vibrio cholerae O1 O395
         vcr  Vibrio cholerae O1 O395
         vcm  Vibrio cholerae O1 M66-2
         vcl  Vibrio cholerae O1 LMA3984-4
         vcx  Vibrio cholerae O49 1154-74
         vcz  Vibrio cholerae O27 10432-62
         vvu  Vibrio vulnificus CMCP6
         vvy  Vibrio vulnificus YJ016
         vvm  Vibrio vulnificus MO6-24/O
         vvl  Vibrio vulnificus 93U204
         vpa  Vibrio parahaemolyticus RIMD 2210633
         vpb  Vibrio parahaemolyticus BB22OP
         vpk  Vibrio parahaemolyticus O1:K33 CDC_K4557
         vpf  Vibrio parahaemolyticus O1:Kuk FDA_R31
         vph  Vibrio parahaemolyticus UCM-V493
         vha  Vibrio campbellii
         vca  Vibrio campbellii
         vag  Vibrio alginolyticus
         vex  Vibrio antiquarius
         vdb  Vibrio diabolicus
         vhr  Vibrio harveyi
         vna  Vibrio natriegens
         vow  Vibrio owensii
         vro  Vibrio rotiferianus
         vsp  Vibrio tasmaniensis
         vej  Vibrio sp. EJY3
         vfu  Vibrio furnissii
         vni  Vibrio nigripulchritudo
         vcy  Vibrio coralliilyticus RE98
         vct  Vibrio coralliilyticus OCN014
         vtu  Vibrio tubiashii
         vfl  Vibrio fluvialis
         vmi  Vibrio mimicus
         vbr  Vibrio breoganii
         vsh  Vibrio mediterranei
         vta  Vibrio tapetis
         vnl  Vibrio neocaledonicus
         vcc  Vibrio cyclitrophicus
         vas  Vibrio astriarenae
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       Aliivibrio (4)
         vsa  Aliivibrio salmonicida
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       Photobacterium (3)
         pgb  Photobacterium gaetbulicola
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       Grimontia (1)
         gho  Grimontia hollisae
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       Paraphotobacterium (1)
         pmai  Paraphotobacterium marinum
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       Salinivibrio (3)
         saly  Salinivibrio sp. YCSC6
         sks  Salinivibrio kushneri
         scot  Salinivibrio costicola
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       Pseudomonas (114)
         pae  Pseudomonas aeruginosa PAO1
         paev  Pseudomonas aeruginosa PAO1-VE13
         paei  Pseudomonas aeruginosa PAO1-VE2
         pau  Pseudomonas aeruginosa UCBPP-PA14
         pap  Pseudomonas aeruginosa PA7
         pag  Pseudomonas aeruginosa LESB58
         paf  Pseudomonas aeruginosa M18
         pnc  Pseudomonas aeruginosa NCGM2.S1
         paeb  Pseudomonas aeruginosa NCGM 1900
         pdk  Pseudomonas aeruginosa DK2
         psg  Pseudomonas aeruginosa B136-33
         prp  Pseudomonas aeruginosa RP73
         paep  Pseudomonas aeruginosa PA1
         paer  Pseudomonas aeruginosa PA1R
         paem  Pseudomonas aeruginosa MTB-1
         pael  Pseudomonas aeruginosa LES431
         paes  Pseudomonas aeruginosa SCV20265
         paeu  Pseudomonas aeruginosa PA38182
         paeg  Pseudomonas aeruginosa YL84
         paec  Pseudomonas aeruginosa c7447m
         paeo  Pseudomonas aeruginosa PAO581
         pmy  Pseudomonas mendocina ymp
         pmk  Pseudomonas mendocina NK-01
         pre  Pseudomonas resinovorans
         ppse  Pseudomonas pseudoalcaligenes
         palc  Pseudomonas alcaligenes
         pcq  Pseudomonas citronellolis
         ppu  Pseudomonas putida KT2440
         ppf  Pseudomonas putida F1
         ppg  Pseudomonas putida GB-1
         ppw  Pseudomonas putida W619
         ppt  Pseudomonas putida S16
         ppb  Pseudomonas putida BIRD-1
         ppi  Pseudomonas putida ND6
         ppx  Pseudomonas putida DOT-T1E
         ppuh  Pseudomonas putida HB3267
         pput  Pseudomonas putida H8234
         ppun  Pseudomonas putida NBRC 14164
         ppud  Pseudomonas putida DLL-E4
         pmon  Pseudomonas monteilii SB3078
         pmot  Pseudomonas monteilii SB3101
         pmos  Pseudomonas soli
         ppj  Pseudomonas plecoglossicida
         pst  Pseudomonas syringae pv. tomato DC3000
         psb  Pseudomonas syringae pv. syringae B728a
         psyr  Pseudomonas syringae CC1557
         psp  Pseudomonas savastanoi pv. phaseolicola 1448A
         pamg  Pseudomonas amygdali
         pavl  Pseudomonas avellanae
         pvd  Pseudomonas viridiflava
         pfl  Pseudomonas protegens Pf-5
         pprc  Pseudomonas protegens CHA0
         ppro  Pseudomonas protegens Cab57
         pfo  Pseudomonas fluorescens Pf0-1
         pfs  Pseudomonas fluorescens SBW25
         pfc  Pseudomonas fluorescens A506
         pfn  Pseudomonas fluorescens UK4
         ppz  Pseudomonas poae
         pfb  Pseudomonas synxantha LBUM223
         pman  Pseudomonas mandelii
         ptv  Pseudomonas trivialis
         pvr  Pseudomonas veronii
         pazo  Pseudomonas azotoformans
         poi  Pseudomonas orientalis
         pfw  Pseudomonas simiae PCL1751
         pff  Pseudomonas simiae PICF7
         pfx  Pseudomonas lurida
         pen  Pseudomonas entomophila
         psc  Pseudomonas stutzeri CCUG 29243
         psh  Pseudomonas stutzeri RCH2
         pstu  Pseudomonas stutzeri 19SMN4
         pba  Pseudomonas brassicacearum subsp. brassicacearum NFM421
         ppuu  Pseudomonas sp. UW4
         pdr  Pseudomonas sp. ATCC 13867
         psv  Pseudomonas sp. VLB120
         psk  Pseudomonas sp. TKP
         pkc  Pseudomonas knackmussii
         pch  Pseudomonas chlororaphis PA23
         pcz  Pseudomonas chlororaphis PCL1606
         pcp  Pseudomonas chlororaphis subsp. aurantiaca
         pfz  Pseudomonas fragi
         palk  Pseudomonas alkylphenolica
         ppv  Pseudomonas parafulva
         psem  Pseudomonas sp. MRSN12121
         psec  Pseudomonas sp. CCOS 191
         ppsy  Pseudomonas versuta
         psos  Pseudomonas sp. Os17
         pkr  Pseudomonas koreensis
         pfk  Pseudomonas frederiksbergensis
         panr  Pseudomonas antarctica
         pset  Pseudomonas sp. TCU-HL1
         psil  Pseudomonas silesiensis
         pym  Pseudomonas yamanorum
         psed  Pseudomonas sp. R2A2
         pke  Pseudomonas kribbensis
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       Azotobacter (4)
       Oblitimonas (1)
       Permianibacter (1)
       Psychrobacter (12)
       Acinetobacter (47)
         acb  Acinetobacter baumannii ATCC 17978
         aby  Acinetobacter baumannii AYE
         abc  Acinetobacter baumannii ACICU
         abn  Acinetobacter baumannii AB0057
         abb  Acinetobacter baumannii AB307-0294
         abx  Acinetobacter baumannii 1656-2
         abz  Acinetobacter baumannii MDR-ZJ06
         abr  Acinetobacter baumannii MDR-TJ
         abd  Acinetobacter baumannii TCDC-AB0715
         abh  Acinetobacter baumannii TYTH-1
         abj  Acinetobacter baumannii BJAB07104
         abab  Acinetobacter baumannii BJAB0715
         abaj  Acinetobacter baumannii BJAB0868
         abaz  Acinetobacter baumannii ZW85-1
         abk  Acinetobacter baumannii AbH12O-A2
         abau  Acinetobacter baumannii AB030
         abaa  Acinetobacter baumannii AB031
         abw  Acinetobacter baumannii AC29
         abal  Acinetobacter baumannii LAC-4
         acc  Acinetobacter pittii
         ano  Acinetobacter nosocomialis
         alc  Acinetobacter lactucae
         acd  Acinetobacter oleivorans
         adv  Acinetobacter defluvii
         awu  Acinetobacter wuhouensis
         agu  Acinetobacter guillouiae
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       Moraxella (8)
       Unclassified Moraxellaceae (1)
         mbah  Moraxellaceae bacterium HYN0046
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       Shewanella (34)
         sdn  Shewanella denitrificans
         spsw  Shewanella psychrophila
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       Idiomarina (5)
       Colwellia (7)
       Litorilituus (1)
       Thalassotalea (2)
       Pseudoalteromonas (23)
         pseo  Pseudoalteromonas piratica OCN003
         pphe  Pseudoalteromonas phenolica
         prr  Pseudoalteromonas rubra
         paln  Pseudoalteromonas aliena
         ppis  Pseudoalteromonas piscicida
         pspo  Pseudoalteromonas spongiae
         psen  Pseudoalteromonas sp. NC201
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       Marinobacter (12)
         maq  Marinobacter hydrocarbonoclasticus VT8
         mhc  Marinobacter hydrocarbonoclasticus ATCC 49840
         mbs  Marinobacter sp. BSs20148
         mpq  Marinobacter psychrophilus
         mlq  Marinobacter sp. LQ44
         msq  Marinobacter salinus
         marj  Marinobacter sp. JH2
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       Alteromonas (23)
       Glaciecola (2)
       Paraglaciecola (2)
       Lacimicrobium (1)
       Catenovulum (1)
       Saliniradius (1)
       Salinimonas (2)
       Hydrocarboniclastica (1)
       Psychromonas (2)
         pin  Psychromonas ingrahamii
         psy  Psychromonas sp. CNPT3
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       Ferrimonas (2)
       Moritella (3)
         mvs  Moritella viscosa
         mya  Moritella yayanosii
         mmaa  Moritella marina
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       Cellvibrio (5)
       Saccharophagus (1)
       Teredinibacter (1)
       Simiduia (1)
       Spongiibacter (1)
       Zhongshania (1)
       Oceanicoccus (1)
         osg  Oceanicoccus sagamiensis
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       Microbulbifer (6)
       Halioglobus (2)
       Kineobactrum (1)
       Coxiella (8)
       Rickettsiella (1)
       Aquicella (2)
         asip  Aquicella siphonis
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       Legionella (23)
         lha  Legionella hackeliae
         lcd  Legionella clemsonensis
         llg  Legionella lansingensis
         lcj  Legionella cherrii
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       Tatlockia (1)
       Methylococcus (2)
       Methylomonas (5)
       Methylomicrobium (2)
       Methylovulum (1)
       Methylocaldum (1)
       Methylospira (1)
       Francisella (43)
         fha  Francisella halioticida
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       Allofrancisella (2)
       Hydrogenovibrio (2)
         tcx  Hydrogenovibrio crunogenus
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       Thiomicrospira (3)
       Methylophaga (2)
       Cycloclasticus (3)
       Piscirickettsia (1)
       Thiomicrorhabdus (1)
       Thioploca (1)
       Beggiatoa (1)
       Nitrosococcus (4)
         noc  Nitrosococcus oceani
         nhl  Nitrosococcus halophilus
         nwa  Nitrosococcus watsonii
         nwr  Nitrosococcus wardiae
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       Allochromatium (1)
       Thiocystis (1)
       Thioflavicoccus (1)
       Marichromatium (1)
       Tenderia (1)
       Nitrosoglobus (1)
       Thiodictyon (1)
       Rheinheimera (1)
       Thermochromatium (1)
       Alkalilimnicola (1)
       Halorhodospira (2)
       Ectothiorhodospira (2)
       Thioalkalivibrio (5)
       Spiribacter (4)
       Acidihalobacter (1)
       Halothiobacillus (2)
       Wenzhouxiangella (1)
       Woeseia (1)
       Granulosicoccus (1)
         gai  Granulosicoccus antarcticus
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       Guyparkeria (1)
       Thiohalobacter (1)
       Hahella (2)
         hch  Hahella chejuensis
         hahe  Hahella sp. KA22
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       Chromohalobacter (1)
       Halomonas (18)
         hcs  Halomonas campaniensis
         hak  Halomonas sp. KO116
         ham  Halomonas sp. R57-5
         hhu  Halomonas huangheensis
         hbe  Halomonas beimenensis
         haf  Halomonas sp. SF2003
         halk  Halomonas alkaliphila
         hvn  Halomonas venusta
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       Portiera (9)
       Carsonella (7)
       Evansia (1)
       Zymobacter (1)
         zpl  Zymobacter palmae
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       Halotalea (1)
         haa  Halotalea alkalilenta
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       Cobetia (1)
       Kushneria (3)
         kuy  Kushneria sp. YCWA18
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       Pistricoccus (1)
       Alcanivorax (5)
       Ketobacter (1)
       Kangiella (4)
       Marinomonas (3)
         mmw  Marinomonas sp. MWYL1
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       Thalassolituus (2)
       Oleispira (1)
         oai  Oleispira antarctica
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       Marinobacterium (1)
         mars  Marinobacterium aestuarii
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       Bacterioplanes (1)
       Neptunomonas (1)
         ncu  Neptunomonas concharum
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       Nitrincola (1)
         nik  Nitrincola sp. KXZD1103
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       Bermanella (1)
       Gynuella (1)
       Reinekea (1)
         rfo  Reinekea forsetii
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       Oleiphilus (1)
         ome  Oleiphilus messinensis
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       Litoricola (1)
       Aeromonas (22)
         aha  Aeromonas hydrophila subsp. hydrophila ATCC 7966
         ahy  Aeromonas hydrophila ML09-119
         ahd  Aeromonas hydrophila YL17
         ahr  Aeromonas hydrophila AL09-71
         ahp  Aeromonas hydrophila pc104A
         ahj  Aeromonas hydrophila J-1
         ahh  Aeromonas hydrophila AL06-06
         ahi  Aeromonas hydrophila AH10
         aaj  Aeromonas hydrophila MX16A
         avr  Aeromonas veronii B565
         avo  Aeromonas veronii TH0426
         adh  Aeromonas dhakensis
         acav  Aeromonas caviae
         arv  Aeromonas rivipollensis
         aes  Aeromonas sp. ASNIH5
         ael  Aeromonas encheleia
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       Tolumonas (1)
       Oceanimonas (1)
         oce  Oceanimonas sp. GK1
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       Oceanisphaera (2)
       Zobellella (1)
       Dichelobacter (1)
       Cardiobacterium (1)
       Gilliamella (1)
       Frischella (1)
       Orbus (1)
         orb  Orbus sp. IPMB12
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       Steroidobacter (1)
       Solimonas (1)
       Sinimarinibacterium (1)
       Immundisolibacter (1)
       Sulfuricaulis (1)
       Sulfurifustis (1)
       Acidiferrobacter (1)
       Salinisphaera (1)
       Thiolapillus (1)
       Sedimenticola (1)
         seds  Sedimenticola thiotaurini
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       Thioglobus (3)
       Pseudohongiella (1)
       Nardonella (1)
       Reidiella (1)
       Ruthia (1)
       Vesicomyosocius (1)
       Unclassified Gammaproteobacteria (6)
     Betaproteobacteria (445)
       Neisseria (29)
       Snodgrassella (1)
       Kingella (1)
       Vitreoscilla (2)
         vit  Vitreoscilla sp. C1
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       Eikenella (2)
       Simonsiella (1)
       Unclassified Neisseriaceae (1)
       Chromobacterium (7)
         cvi  Chromobacterium violaceum
         cvc  Chromobacterium vaccinii
         chro  Chromobacterium sp. ATCC 53434
         chri  Chromobacterium sp. IIBBL 112-1
         crz  Chromobacterium rhizoryzae
         chrb  Chromobacterium sp. IIBBL 274-1
         chrm  Chromobacterium sp. 257-1
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       Iodobacter (1)
       Laribacter (1)
         lhk  Laribacter hongkongensis
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       Pseudogulbenkiania (1)
       Jeongeupia (1)
         jeu  Jeongeupia sp. USM3
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       Aquaspirillum (1)
         aql  Aquaspirillum sp. LM1
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       Aquitalea (2)
         aqs  Aquitalea sp. USM4
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       Deefgea (1)
         dee  Deefgea sp. D17
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       Ralstonia (13)
         rsn  Ralstonia solanacearum Po82
         rsy  Ralstonia solanacearum UY031
         rpi  Ralstonia pickettii 12J
         rpf  Ralstonia pickettii 12D
         rpj  Ralstonia pickettii DTP0602
         rmn  Ralstonia mannitolilytica
         rin  Ralstonia insidiosa
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       Cupriavidus (13)
         reh  Cupriavidus necator H16
         cnc  Cupriavidus necator N-1
         cuh  Cupriavidus necator NH9
         reu  Cupriavidus pinatubonensis JMP134
         rme  Cupriavidus metallidurans
         cti  Cupriavidus taiwanensis
         cbw  Cupriavidus basilensis
         cgd  Cupriavidus gilardii
         ccup  Cupriavidus sp. USMAHM13
         cup  Cupriavidus malaysiensis
         cuu  Cupriavidus sp. USMAA2-4
         cpau  Cupriavidus pauculus
         cox  Cupriavidus oxalaticus
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       Burkholderia (89)
         bma  Burkholderia mallei ATCC 23344
         bmv  Burkholderia mallei SAVP1
         bml  Burkholderia mallei NCTC 10229
         bmn  Burkholderia mallei NCTC 10247
         bmal  Burkholderia mallei 23344
         bmae  Burkholderia mallei 6
         bmaq  Burkholderia mallei BMQ
         bmai  Burkholderia mallei 2000031063
         bmaf  Burkholderia mallei FMH 23344
         bmaz  Burkholderia mallei NCTC 10247
         bmab  Burkholderia mallei 2002734299
         bps  Burkholderia pseudomallei K96243
         bpm  Burkholderia pseudomallei 1710b
         bpl  Burkholderia pseudomallei 1106a
         bpd  Burkholderia pseudomallei 668
         bpr  Burkholderia pseudomallei MSHR346
         bpse  Burkholderia pseudomallei MSHR305
         bpsm  Burkholderia pseudomallei MSHR511
         bpsu  Burkholderia pseudomallei MSHR146
         bpsd  Burkholderia pseudomallei MSHR520
         bpz  Burkholderia pseudomallei 1026b
         bpq  Burkholderia pseudomallei BPC006
         bpk  Burkholderia pseudomallei NCTC 13179
         bpsh  Burkholderia pseudomallei HBPUB10134a
         bpsa  Burkholderia pseudomallei NAU35A-3
         bpso  Burkholderia pseudomallei A79A
         but  Burkholderia pseudomallei TSV202
         bte  Burkholderia thailandensis E264
         btq  Burkholderia thailandensis 2002721723
         btj  Burkholderia thailandensis E444
         btz  Burkholderia thailandensis H0587
         btd  Burkholderia thailandensis MSMB121
         btv  Burkholderia thailandensis MSMB59
         bthe  Burkholderia thailandensis E254
         bthm  Burkholderia thailandensis USAMRU Malaysia #20
         btha  Burkholderia thailandensis 2003015869
         bthl  Burkholderia thailandensis 2002721643
         bok  Burkholderia oklahomensis E0147
         boc  Burkholderia oklahomensis C6786
         buu  Burkholderia sp. BDU6
         bvi  Burkholderia vietnamiensis G4
         bve  Burkholderia vietnamiensis LMG 10929
         bur  Burkholderia lata
         bcn  Burkholderia cenocepacia AU1054
         bch  Burkholderia cenocepacia HI2424
         bcm  Burkholderia cenocepacia MC0-3
         bcj  Burkholderia cenocepacia J2315
         bcen  Burkholderia cenocepacia DDS 22E-1
         bcew  Burkholderia cenocepacia DWS 37E-2
         bceo  Burkholderia cenocepacia H111
         bam  Burkholderia ambifaria AMMD
         bac  Burkholderia ambifaria MC40-6
         bmj  Burkholderia multivorans ATCC 17616 (Tohoku)
         bmu  Burkholderia multivorans ATCC 17616 (JGI)
         bmk  Burkholderia multivorans DDS 15A-1
         bmul  Burkholderia multivorans ATCC BAA-247
         bct  Burkholderia cepacia GG4
         bced  Burkholderia cepacia DDS 7H-2
         bcep  Burkholderia cepacia ATCC 25416
         bdl  Burkholderia dolosa
         bpyr  Burkholderia pyrrocinia
         bcon  Burkholderia contaminans
         bub  Burkholderia ubonensis
         bdf  Burkholderia diffusa
         blat  Burkholderia latens
         btei  Burkholderia territorii
         bsem  Burkholderia seminalis
         bpsl  Burkholderia pseudomultivorans
         bmec  Burkholderia metallica
         bstg  Burkholderia stagnalis
         bstl  Burkholderia stabilis
         bgl  Burkholderia glumae BGR1
         bgu  Burkholderia glumae LMG 2196 = ATCC 33617
         bug  Burkholderia sp. CCGE1001
         bgf  Burkholderia sp. CCGE1003
         bgd  Burkholderia gladioli BSR3
         bgo  Burkholderia gladioli ATCC 10248
         byi  Burkholderia sp. YI23
         buk  Burkholderia sp. KJ006
         buo  Burkholderia insecticola
         bue  Burkholderia sp. RPE67
         bul  Burkholderia sp. 2002721687
         buq  Burkholderia sp. HB1
         bgp  Burkholderia plantarii PG1
         bpla  Burkholderia plantarii ATCC 43733
         bud  Burkholderia sp. Bp5365
         buz  Burkholderia sp. OLGA172
         bum  Burkholderia sp. PAMC 26561
         bui  Burkholderia sp. PAMC 28687
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       Paraburkholderia (18)
         bxe  Paraburkholderia xenovorans LB400
         bxb  Paraburkholderia xenovorans LB400
         bph  Paraburkholderia phymatum
         bge  Paraburkholderia sp. CCGE1002
         bpx  Paraburkholderia phenoliruptrix
         bpy  Paraburkholderia phytofirmans
         bfn  Paraburkholderia fungorum
         bcai  Paraburkholderia caribensis
         pspw  Paraburkholderia sprentiae
         para  Paraburkholderia sp. SOS3
         parb  Paraburkholderia aromaticivorans
         phs  Paraburkholderia hospita
         pter  Paraburkholderia terrae
         pgp  Paraburkholderia graminis
         pcj  Paraburkholderia caledonica
         pts  Paraburkholderia terricola
         pcaf  Paraburkholderia caffeinilytica
         pmeg  Paraburkholderia megapolitana
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       Mycetohabitans (1)
         brh  Paraburkholderia rhizoxinica
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       Polynucleobacter (4)
       Pandoraea (14)
         ppk  Pandoraea pnomenusa 3kgm
         ppno  Pandoraea pnomenusa RB38
         ppnm  Pandoraea pnomenusa DSM 16536
         prb  Pandoraea pnomenusa
         ppul  Pandoraea pulmonicola
         pspu  Pandoraea sputorum
         papi  Pandoraea apista
         pve  Pandoraea vervacti
         pox  Pandoraea oxalativorans
         ptx  Pandoraea thiooxydans
         pfg  Pandoraea faecigallinarum
         pnr  Pandoraea norimbergensis
         pand  Pandoraea sp. XY-2
         pfib  Pandoraea fibrosis
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       Paucimonas (1)
         plg  Paucimonas lemoignei
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       Ephemeroptericola (1)
       Lautropia (1)
       Mycoavidus (1)
       Caballeronia (1)
         caba  Caballeronia sp. SBC2
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       Limnobacter (1)
       Bordetella (24)
         bpar  Bordetella parapertussis Bpp5
         bpa  Bordetella parapertussis 12822
         bbh  Bordetella bronchiseptica 253
         bbr  Bordetella bronchiseptica RB50
         bbm  Bordetella bronchiseptica MO149
         bbx  Bordetella bronchiseptica S798
         bho  Bordetella holmesii ATCC 51541
         bhm  Bordetella holmesii 44057
         bhz  Bordetella hinzii
         bbro  Bordetella bronchialis
         bfz  Bordetella flabilis
         bpdz  Bordetella pseudohinzii
         boh  Bordetella sp. H567
         bgm  Bordetella genomosp. 13
         boz  Bordetella sp. HZ20
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       Achromobacter (9)
         axy  Achromobacter xylosoxidans A8
         axo  Achromobacter xylosoxidans NH44784-1996
         axn  Achromobacter xylosoxidans NBRC 15126 = ATCC 27061
         axx  Achromobacter xylosoxidans NCTC10807
         adt  Achromobacter denitrificans
         ais  Achromobacter insolitus
         asw  Achromobacter spanius
         achr  Achromobacter sp. AONIH1
         achb  Achromobacter sp. B7
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       Taylorella (5)
       Pusillimonas (3)
         put  Pusillimonas sp. T7-7
         pus  Pusillimonas sp. ye3
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       Advenella (2)
         aka  Advenella kashmirensis
         amim  Advenella mimigardefordensis
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       Castellaniella (1)
       Basilea (1)
       Alcaligenes (3)
         afa  Alcaligenes faecalis ZD02
         afq  Alcaligenes faecalis JQ135
         aaqu  Alcaligenes aquatilis
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   3/42
       Paenalcaligenes (1)
       Orrella (1)
       Oligella (1)
       Pigmentiphaga (2)
         pig  Pigmentiphaga sp. H8
         pacr  Pigmentiphaga aceris
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       Kerstersia (1)
       Rhodoferax (6)
         rfr  Rhodoferax ferrireducens
         rac  Rhodoferax antarcticus
         rhy  Rhodoferax koreense
         rhg  Rhodoferax sp. Gr-4
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       Polaromonas (5)
         pol  Polaromonas sp. JS666
         pos  Polaromonas sp. SP1
         poo  Polaromonas sp. Pch-P
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       Acidovorax (11)
         dia  Acidovorax ebreus
         aaa  Acidovorax avenae
         ack  Acidovorax sp. KKS102
         acra  Acidovorax sp. RAC01
         acid  Acidovorax carolinensis NA2
         acip  Acidovorax carolinensis P4
         acin  Acidovorax carolinensis NA3
         acis  Acidovorax carolinensis P3
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       Verminephrobacter (1)
         vei  Verminephrobacter eiseniae
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       Delftia (4)
       Variovorax (6)
         vap  Variovorax paradoxus S110
         vpe  Variovorax paradoxus EPS
         vpd  Variovorax paradoxus B4
         vaa  Variovorax sp. PAMC 28711
         vbo  Variovorax boronicumulans
         vam  Variovorax sp. PMC12
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       Comamonas (5)
       Alicycliphilus (2)
         adn  Alicycliphilus denitrificans BC
         adk  Alicycliphilus denitrificans K601
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       Ramlibacter (1)
         rta  Ramlibacter tataouinensis
   3/42
       Symbiobacter (1)
       Ottowia (2)
       Limnohabitans (2)
         lim  Limnohabitans sp. 103DPR2
         lih  Limnohabitans sp. 63ED37-2
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       Hydrogenophaga (6)
         hyc  Hydrogenophaga sp. PAMC20947
         hyn  Hydrogenophaga sp. BPS33
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       Diaphorobacter (2)
         dih  Diaphorobacter sp. HDW4A
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       Simplicispira (1)
       Melaminivora (2)
       Serpentinomonas (2)
       Methylibium (2)
         mpt  Methylibium petroleiphilum
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       Herminiimonas (1)
       Janthinobacterium (8)
         jab  Janthinobacterium sp. B9-8
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       Herbaspirillum (6)
         hee  Herbaspirillum sp. meg3
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       Zinderia (1)
       Collimonas (3)
         cfu  Collimonas fungivorans
         care  Collimonas arenae
         cpra  Collimonas pratensis
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       Massilia (10)
         mnr  Massilia sp. NR 4-1
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       Oxalobacter (1)
       Undibacterium (2)
         upv  Undibacterium parvum
   3/42
       Noviherbaspirillum (1)
       Duganella (1)
       Sutterella (2)
         sutt  Sutterella megalosphaeroides
   2/42
       Leptothrix (1)
       Thiomonas (2)
       Rubrivivax (2)
         rge  Rubrivivax gelatinosus
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       Roseateles (1)
       Paucibacter (1)
       Mitsuaria (1)
       Rhizobacter (1)
         rgu  Rhizobacter gummiphilus
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       Aquabacterium (1)
       Sphaerotilus (1)
       Xylophilus (1)
       Unclassified Burkholderiales (3)
         pbh  Polyangium brachysporum
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       Nitrosomonas (7)
       Nitrosospira (2)
       Sulfuritalea (1)
       Methyloversatilis (1)
       Thiobacillus (1)
         tbd  Thiobacillus denitrificans
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       Methylobacillus (1)
       Methylotenera (2)
         mmb  Methylotenera mobilis
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       Methylovorus (2)
       Methylopumilus (2)
       Methylophilus (1)
         meu  Methylophilus sp. TWE2
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       Sideroxydans (1)
       Gallionella (1)
         gca  Gallionella capsiferriformans
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       Sulfuricella (1)
       Sulfuriferula (3)
         sulf  Sulfuriferula sp. AH1
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       Ferriphaselus (1)
       Nitrotoga (1)
       Aromatoleum (1)
       Azospira (1)
       Rugosibacter (1)
       Oryzomicrobium (1)
       Unclassified Rhodocyclaceae (1)
         rbh  Rhodocyclaceae bacterium Thauera-like
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       Dechloromonas (2)
       Azoarcus (9)
         azo  Azoarcus sp. BH72
         aoa  Azoarcus olearius
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       Thauera (5)
       Unclassified Zoogloeaceae (1)
         zpa  Zoogloeaceae bacteirum Par-f-2
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       Ferrovum (1)
       Accumulibacter (1)
       Tremblaya (3)
       Kinetoplastibacterium (8)
       Profftella (1)
       Nasuia (1)
       Vidania (1)
       Unclassified Betaproteobacteria (3)
         beb  Betaproteobacteria bacterium UKL13-2
         beba  Betaproteobacteria bacterium GR16-43
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     Epsilonproteobacteria (186)
       Helicobacter (76)
         hcp  Helicobacter cinaedi PAGU611
         hcb  Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
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       Wolinella (1)
       Sulfurimonas (5)
       Sulfuricurvum (2)
       Campylobacter (67)
         cju  Campylobacter jejuni subsp. jejuni 81116
         chyo  Campylobacter hyointestinalis
         chw  Campylobacter hepaticus
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       Arcobacter (13)
         ant  Arcobacter nitrofigilis
         amyt  Arcobacter mytili
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       Aliiarcobacter (1)
       Halarcobacter (2)
         hebr  Halarcobacter ebronensis
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       Pseudoarcobacter (1)
       Unclassified Arcobacter (2)
       Sulfurospirillum (7)
         sba  Sulfurospirillum barnesii
         smul  Sulfurospirillum multivorans
         shal  Sulfurospirillum halorespirans
         suls  Sulfurospirillum sp. SL2-1
         sulj  Sulfurospirillum sp. JPD-1
         sult  Sulfurospirillum sp. ACSTCE
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       Hydrogenimonas (1)
       Nitratifractor (1)
         nsa  Nitratifractor salsuginis
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       Nitratiruptor (1)
       Sulfurovum (2)
       Nautilia (2)
       Caminibacter (1)
       Cetia (1)
     Deltaproteobacteria (90)
       Geobacter (11)
       Geoalkalibacter (1)
         gsb  Geoalkalibacter subterraneus
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       Pelobacter (4)
         pca  Pelobacter carbinolicus
         ppd  Pelobacter propionicus
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       Desulfuromonas (2)
         deu  Desulfuromonas sp. DDH964
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       Desulfovibrio (18)
         dde  Desulfovibrio alaskensis
         ddn  Desulfovibrio desulfuricans ND132
         dgg  Desulfovibrio gigas
         dpg  Desulfovibrio piger
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       Pseudodesulfovibrio (5)
         das  Pseudodesulfovibrio aespoeensis
         dpi  Pseudodesulfovibrio piezophilus
         dej  Pseudodesulfovibrio indicus
         pprf  Pseudodesulfovibrio profundus
         psel  Pseudodesulfovibrio sp. SRB007
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       Lawsonia (2)
       Desulfomicrobium (2)
         dba  Desulfomicrobium baculatum
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       Desulfohalobium (1)
       Desulfotalea (1)
       Desulfurivibrio (1)
         dak  Desulfurivibrio alkaliphilus
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       Desulfobulbus (2)
       Desulfocapsa (1)
         dsf  Desulfocapsa sulfexigens
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       Desulfococcus (2)
       Desulfatibacillum (1)
         dal  Desulfatibacillum aliphaticivorans
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       Desulfobacterium (1)
       Desulfobacula (1)
         dto  Desulfobacula toluolica
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       Desulfosarcina (3)
         dwd  Desulfosarcina widdelii
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       Anaeromyxobacter (4)
       Myxococcus (3)
       Corallococcus (3)
       Stigmatella (1)
       Archangium (1)
       Melittangium (1)
       Cystobacter (1)
         cfus  Cystobacter fuscus
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       Vulgatibacter (1)
       Sorangium (2)
         scl  Sorangium cellulosum So ce56
         scu  Sorangium cellulosum So0157-2
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       Chondromyces (1)
       Sandaracinus (1)
       Labilithrix (1)
         llu  Labilithrix luteola
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       Minicystis (1)
         mrm  Minicystis rosea
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       Haliangium (1)
       Syntrophus (1)
       Desulfobacca (1)
         dao  Desulfobacca acetoxidans
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       Desulfomonile (1)
       Syntrophobacter (1)
         sfu  Syntrophobacter fumaroxidans
   2/42
       Desulfoglaeba (1)
         dax  Desulfoglaeba alkanexedens
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       Desulfarculus (1)
       Hippea (1)
       Desulfurella (1)
       Bradymonas (1)
     Alphaproteobacteria (701)
       Rickettsia (48)
       Orientia (2)
       Phycorickettsia (1)
       Wolbachia (10)
       Anaplasma (10)
       Ehrlichia (14)
       Neorickettsia (4)
       Midichloria (1)
       Fokinia (1)
       Unclassified Rickettsiales (2)
       Paracaedibacter (1)
       Paracaedimonas (1)
       Nucleicultrix (1)
       Unclassified Holosporaceae (1)
       Mesorhizobium (11)
         mlo  Mesorhizobium japonicum MAFF 303099
         mln  Mesorhizobium loti NZP2037
         mci  Mesorhizobium ciceri (biovar Biserrulae)
         mop  Mesorhizobium opportunistum
         mam  Mesorhizobium australicum
         mamo  Mesorhizobium amorphae
         meso  Mesorhizobium sp. B7
         mesw  Mesorhizobium sp. WSM1497
         mesm  Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2
         mesp  Mesorhizobium sp. Pch-S
         mhua  Mesorhizobium huakuii
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       Chelativorans (1)
         mes  Chelativorans sp. BNC1
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       Hoeflea (1)
         hoe  Hoeflea sp. IMCC20628
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       Aminobacter (2)
         aak  Aminobacter aminovorans
         amih  Aminobacter sp. MSH1
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       Phyllobacterium (1)
         pht  Phyllobacterium zundukense
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       Roseitalea (1)
         rpod  Roseitalea porphyridii
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       Nitratireductor (1)
         niy  Nitratireductor sp. SY7
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       Oricola (1)
       Parvibaculum (1)
       Pyruvatibacter (1)
         pmob  Pyruvatibacter mobilis
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       Unclassified Rhodobiaceae (1)
         rbs  Rhodobiaceae bacterium SMS8
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       Sinorhizobium (15)
         sme  Sinorhizobium meliloti 1021
         smk  Sinorhizobium meliloti AK83
         smq  Sinorhizobium meliloti BL225C
         smx  Sinorhizobium meliloti SM11
         smi  Sinorhizobium meliloti Rm41
         smeg  Sinorhizobium meliloti GR4
         smel  Sinorhizobium meliloti 2011
         smer  Sinorhizobium meliloti RMO17
         smd  Sinorhizobium medicae
         rhi  Sinorhizobium fredii NGR234
         sfh  Sinorhizobium fredii HH103
         sfd  Sinorhizobium fredii USDA 257
         six  Sinorhizobium sp. RAC02
         same  Sinorhizobium americanum
         sino  Sinorhizobium sp. CCBAU 05631
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       Ensifer (4)
         ead  Ensifer adhaerens OV14
         eah  Ensifer adhaerens Casida A
         esj  Ensifer sojae
         eak  Ensifer alkalisoli
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       Agrobacterium (10)
         atu  Agrobacterium fabrum
         ara  Agrobacterium radiobacter
         atf  Agrobacterium tumefaciens Ach5
         ata  Agrobacterium tumefaciens S33
         avi  Agrobacterium vitis
         agr  Agrobacterium sp. H13-3
         agc  Agrobacterium sp. RAC06
         aro  Agrobacterium rhizogenes
         agt  Agrobacterium sp. 33MFTa1.1
         alf  Agrobacterium larrymoorei
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       Rhizobium (26)
         ret  Rhizobium etli CFN 42
         rec  Rhizobium etli CIAT 652
         rel  Rhizobium etli bv. mimosae Mim1
         rep  Rhizobium etli bv. phaseoli IE4803
         rei  Rhizobium sp. IE4771
         rle  Rhizobium leguminosarum bv. viciae 3841
         rlt  Rhizobium leguminosarum bv. trifolii WSM2304
         rlg  Rhizobium leguminosarum bv. trifolii WSM1325
         rlb  Rhizobium leguminosarum bv. trifolii WSM1689
         rlu  Rhizobium leguminosarum bv. trifolii CB782
         rtr  Rhizobium tropici
         rir  Rhizobium sp. IRBG74
         rhl  Rhizobium favelukesii
         rga  Rhizobium gallicum
         rhn  Rhizobium sp. N1341
         rpha  Rhizobium phaseoli
         rht  Rhizobium sp. NT-26
         rhx  Rhizobium sp. N731
         rhv  Rhizobium sp. S41
         rhk  Rhizobium sp. Kim5
         rez  Rhizobium esperanzae
         rjg  Rhizobium jaguaris
         rhr  Rhizobium sp. 11515TR
         rgr  Rhizobium grahamii
         rad  Rhizobium acidisoli
         rpus  Rhizobium pusense
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       Neorhizobium (4)
         ngl  Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141
         ngg  Neorhizobium galegae bv. orientalis HAMBI 540
         neo  Neorhizobium sp. SOG26
         nen  Neorhizobium sp. NCHU2750
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       Liberibacter (7)
       Shinella (1)
         shz  Shinella sp. HZN7
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       Georhizobium (1)
         abaw  Georhizobium profundi
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       Brucella (44)
         bme  Brucella melitensis bv. 1 16M
         bmel  Brucella melitensis bv. 1 16M
         bmi  Brucella melitensis ATCC 23457
         bmz  Brucella melitensis M28
         bmg  Brucella melitensis M5-90
         bmw  Brucella melitensis NI
         bmee  Brucella melitensis bv. 3 Ether
         bmf  Brucella abortus 2308
         bmb  Brucella abortus bv. 1 9-941
         bmc  Brucella abortus S19
         baa  Brucella abortus A13334
         babo  Brucella abortus bv. 2 86/8/59
         babr  Brucella abortus bv. 6 870
         babt  Brucella abortus 63 75
         babb  Brucella abortus BDW
         babu  Brucella abortus bv. 9 C68
         babs  Brucella abortus BER
         babc  Brucella abortus NCTC 10505
         bms  Brucella suis 1330
         bsi  Brucella suis 1330
         bsf  Brucella suis bv. 1
         bsui  Brucella suis bv. 2 Bs143CITA
         bsup  Brucella suis bv. 2 PT09143
         bsuv  Brucella suis bv. 2 PT09172
         bsuc  Brucella suis bv. 2 Bs364CITA
         bmt  Brucella suis ATCC 23445
         bsz  Brucella suis bv. 3
         bsv  Brucella suis VBI22
         bsw  Brucella suis ZW043
         bov  Brucella ovis
         bcs  Brucella canis ATCC 23365
         bsk  Brucella canis HSK A52141
         bol  Brucella canis Oliveri
         bcar  Brucella canis RM6/66
         bcas  Brucella canis SVA13
         bmr  Brucella microti
         bpp  Brucella pinnipedialis B2/94
         bpv  Brucella pinnipedialis 6/566
         bcet  Brucella ceti TE10759-12
         bvl  Brucella vulpis
         bru  Brucella sp. 2002734562
         brj  Brucella sp. 09RB8471
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       Ochrobactrum (4)
         oan  Ochrobactrum anthropi ATCC 49188
         oah  Ochrobactrum anthropi OAB
         ops  Ochrobactrum pseudogrignonense
         och  Ochrobactrum sp. A44
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       Bradyrhizobium (18)
         bja  Bradyrhizobium diazoefficiens USDA 110
         bju  Bradyrhizobium japonicum USDA 6
         bjp  Bradyrhizobium japonicum E109
         bra  Bradyrhizobium sp. ORS 278
         bbt  Bradyrhizobium sp. BTAi1
         brs  Bradyrhizobium sp. S23321
         aol  Bradyrhizobium oligotrophicum
         brc  Bradyrhizobium sp. CCGE-LA001
         brad  Bradyrhizobium sp. BF49
         bic  Bradyrhizobium icense
         bro  Bradyrhizobium sp. ORS 285
         brk  Bradyrhizobium sp. SK17
         bot  Bradyrhizobium ottawaense
         brq  Bradyrhizobium amphicarpaeae
         bgq  Bradyrhizobium guangdongense
         bgz  Bradyrhizobium guangzhouense
         bsym  Bradyrhizobium symbiodeficiens
         bbet  Bradyrhizobium betae
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       Rhodopseudomonas (7)
         rpa  Rhodopseudomonas palustris CGA009
         rpb  Rhodopseudomonas palustris HaA2
         rpc  Rhodopseudomonas palustris BisB18
         rpd  Rhodopseudomonas palustris BisB5
         rpe  Rhodopseudomonas palustris BisA53
         rpt  Rhodopseudomonas palustris TIE-1
         rpx  Rhodopseudomonas palustris DX-1
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       Nitrobacter (2)
       Oligotropha (3)
         oca  Oligotropha carboxidovorans OM5 (Mississippi)
         ocg  Oligotropha carboxidovorans OM5 (Goettingen)
         oco  Oligotropha carboxidovorans OM4
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       Bosea (5)
         bop  Bosea sp. PAMC 26642
         bos  Bosea sp. RAC05
         bvv  Bosea vaviloviae
         boi  Bosea sp. Tri-49
         bof  Bosea sp. F3-2
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       Variibacter (1)
         vgo  Variibacter gotjawalensis
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       Bartonella (23)
       Xanthobacter (1)
         xau  Xanthobacter autotrophicus
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       Azorhizobium (1)
         azc  Azorhizobium caulinodans
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       Starkeya (1)
         sno  Starkeya novella
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       Labrys (1)
         lne  Labrys neptuniae
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       Ancylobacter (2)
         anc  Ancylobacter sp. TS-1
         apra  Ancylobacter pratisalsi
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       Methylorubrum (6)
         mch  Methylorubrum extorquens CM4
         mpo  Methylorubrum populi
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       Methylobacterium (14)
         mrd  Methylobacterium radiotolerans
         met  Methylobacterium sp. 4-46
         mno  Methylobacterium nodulans
         mor  Methylobacterium oryzae
         maqu  Methylobacterium aquaticum
         mphy  Methylobacterium phyllosphaerae
         mee  Methylobacterium currus
         metx  Methylobacterium sp. XJLW
         mmes  Methylobacterium mesophilicum
         mtea  Methylobacterium terrae
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       Microvirga (3)
       Beijerinckia (1)
       Methylocella (2)
       Methylovirgula (1)
       Unclassified Beijerinckiaceae (1)
       Chelatococcus (2)
         chel  Chelatococcus sp. CO-6
         cdq  Chelatococcus daeguensis
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   4/42
       Hyphomicrobium (4)
       Rhodomicrobium (1)
         rva  Rhodomicrobium vannielii
   4/42
       Pelagibacterium (1)
       Filomicrobium (2)
       Devosia (3)
         deq  Devosia sp. H5989
         dei  Devosia sp. I507
         dea  Devosia ginsengisoli
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       Blastochloris (2)
         bvr  Blastochloris viridis
         blag  Blastochloris sp. GI
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       Rhodoplanes (1)
         rhz  Rhodoplanes sp. Z2-YC6860
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       Maritalea (1)
         mmyr  Maritalea myrionectae
   4/42
       Youhaiella (1)
         yti  Youhaiella tibetensis
   4/42
       Methylocystis (5)
         mhey  Methylocystis heyeri
   2/42
       Methylosinus (1)
       Pleomorphomonas (1)
         pleo  Pleomorphomonas sp. SM30
   4/42
       Martelella (3)
         mey  Martelella endophytica
         maad  Martelella sp. AD-3
         mmed  Martelella mediterranea
   4/42
   2/42
   2/42
       Aureimonas (1)
         aua  Aureimonas sp. AU20
   4/42
       Breoghania (1)
         brn  Breoghania sp. L-A4
   4/42
       Hodgkinia (4)
       Methyloceanibacter (1)
       Tokpelaia (1)
       Pseudorhodoplanes (1)
         psin  Pseudorhodoplanes sinuspersici
   6/42
       Hartmannibacter (1)
         hdi  Hartmannibacter diazotrophicus
   5/42
       Nordella (1)
         noh  Nordella sp. HKS 07
   8/42
       Methyloligella (1)
       Unclassified Rhizobiales (1)
         rbm  Rhizobiales bacterium NRL2
   4/42
       Caulobacter (8)
         cak  Caulobacter sp. K31
         cse  Caulobacter segnis
         chq  Caulobacter henricii
         cmb  Caulobacter mirabilis
         cfh  Caulobacter flavus
         cauf  Caulobacter sp. FWC26
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       Phenylobacterium (2)
       Brevundimonas (10)
         brd  Brevundimonas sp. DS20
         brl  Brevundimonas sp. LM2
         bmed  Brevundimonas mediterranea
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       Asticcacaulis (1)
       Unclassified Caulobacteraceae (1)
       Ruegeria (4)
         sil  Ruegeria pomeroyi
         sit  Ruegeria sp. TM1040
         rua  Ruegeria sp. AD91A
         rut  Ruegeria sp. THAF33
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       Epibacterium (1)
         rmb  Epibacterium mobile
   4/42
       Rhodobacter (7)
         rcp  Rhodobacter capsulatus
         rbl  Rhodobacter blasticus
   5/42
   4/42
       Jannaschia (1)
         jan  Jannaschia sp. CCS1
   2/42
       Roseobacter (3)
         rde  Roseobacter denitrificans
         rli  Roseobacter litoralis
         rpon  Roseobacter ponti
   4/42
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       Paracoccus (13)
         pde  Paracoccus denitrificans
         pami  Paracoccus aminophilus
         pye  Paracoccus yeei
         pcon  Paracoccus contaminans
         pzh  Paracoccus zhejiangensis
         paro  Paracoccus sp. BM15
         paru  Paracoccus jeotgali
         pamn  Paracoccus aminovorans
         pars  Paracoccus sp. SC2-6
         parr  Paracoccus sp. Arc7-R13
         pkd  Paracoccus kondratievae
         ppan  Paracoccus pantotrophus
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       Dinoroseobacter (1)
         dsh  Dinoroseobacter shibae
   2/42
       Ketogulonicigenium (3)
       Pseudovibrio (1)
         psf  Pseudovibrio sp. FO-BEG1
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       Phaeobacter (6)
         pga  Phaeobacter inhibens DSM 17395
         pgl  Phaeobacter inhibens 2.10
         pgd  Phaeobacter gallaeciensis DSM 26640
         php  Phaeobacter porticola
         ppic  Phaeobacter piscinae
         phq  Phaeobacter sp. LSS9
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       Octadecabacter (4)
         oat  Octadecabacter antarcticus
         oar  Octadecabacter arcticus
         otm  Octadecabacter temperatus
         oct  Octadecabacter sp. SW4
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       Leisingera (3)
         lmd  Leisingera methylohalidivorans
         lej  Leisingera sp. NJS204
         laqu  Leisingera aquaemixtae
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       Roseibacterium (1)
         red  Roseibacterium elongatum
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       Planktomarina (1)
       Celeribacter (4)
         cid  Celeribacter indicus
         ceh  Celeribacter ethanolicus
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       Marinovum (1)
         malg  Marinovum algicola
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       Confluentimicrobium (1)
         con  Confluentimicrobium sp. EMB200-NS6
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       Rhodovulum (3)
         rsu  Rhodovulum sulfidophilum
         rhm  Rhodovulum sp. MB263
         rhc  Rhodovulum sp. P5
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       Pannonibacter (1)
         pphr  Pannonibacter phragmitetus
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       Halocynthiibacter (1)
         hat  Halocynthiibacter arcticus
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       Labrenzia (5)
         lap  Labrenzia sp. CP4
         lagg  Labrenzia aggregata
         labr  Labrenzia sp. VG12
         labp  Labrenzia sp. PHM005
         labt  Labrenzia sp. THAF35
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       Defluviimonas (1)
         daa  Defluviimonas alba
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       Yangia (2)
         yan  Yangia sp. CCB-MM3
         ypac  Yangia pacifica
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       Sulfitobacter (6)
         suam  Sulfitobacter sp. AM1-D1
         spse  Sulfitobacter pseudonitzschiae
         sulz  Sulfitobacter sp. SK012
         suli  Sulfitobacter sp. JL08
         suld  Sulfitobacter sp. D7
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       Donghicola (1)
         don  Marivivens sp. JLT3646
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       Salipiger (1)
         tpro  Salipiger profundus
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       Tateyamaria (1)
         tom  Tateyamaria omphalii
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       Pelagibaca (1)
         paby  Pelagibaca abyssi
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       Thioclava (1)
       Roseovarius (5)
         rmm  Roseovarius mucosus
         rok  Roseovarius sp. AK1035
         rid  Roseovarius indicus
         rom  Roseovarius sp. MME-070
         roh  Roseovarius sp. THAF27
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       Yoonia (1)
         lvs  Yoonia vestfoldensis
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       Antarctobacter (1)
         aht  Antarctobacter heliothermus
   4/42
       Rhodobaca (1)
         rbg  Rhodobaca barguzinensis
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       Sagittula (1)
         sagu  Sagittula sp. P11
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       Thalassococcus (1)
         thaa  Thalassococcus sp. S3
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       Gemmobacter (1)
         geh  Gemmobacter sp. HYN0069
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       Tabrizicola (1)
         taw  Tabrizicola piscis
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       Silicimonas (1)
       Sedimentitalea (1)
         sedi  Sedimentitalea sp. W43
   5/42
       Haematobacter (1)
         hml  Haematobacter massiliensis
   6/42
       Boseongicola (1)
         boo  Boseongicola sp. CCM32
   3/42
       Pseudorhodobacter (1)
         pseb  Pseudorhodobacter sp. S12M18
   5/42
       Litoreibacter (1)
         lit  Litoreibacter sp. LN3S51
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       Oceanicola (1)
         ocd  Oceanicola sp. D3
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       Maribius (1)
         maru  Maribius sp. THAF1
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       Roseivivax (1)
         rot  Roseivivax sp. THAF197b
   2/42
       Paraoceanicella (1)
         ppru  Paraoceanicella profunda
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       Stappia (1)
         siw  Stappia indica
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       Fluviibacterium (1)
         faq  Fluviibacterium aquatile
   6/42
       Halovulum (1)
       Pseudohalocynthiibacter (1)
         paed  Pseudohalocynthiibacter aestuariivivens
   6/42
       Monaibacterium (1)
         mon  Monaibacterium sp. ALG8
   2/42
       Mameliella (1)
         malu  Mameliella alba
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       Thalassobius (1)
         tgl  Thalassobius gelatinovorus
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       Unclassified Rhodobacteraceae (2)
         rbz  Rhodobacteraceae bacterium G7
         thas  Rhodobacteraceae bacterium SH-1
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       Maricaulis (1)
       Hyphomonas (1)
       Hirschia (1)
       Glycocaulis (1)
       Hyphomonadaceae (1)
         hbc  Hyphomonadaceae bacterium UKL13-1
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       Zymomonas (8)
       Novosphingobium (10)
         npn  Novosphingobium pentaromativorans
         nov  Novosphingobium sp. P6W
         nor  Novosphingobium sp. ABRDHK2
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       Sphingopyxis (12)
         sphk  Sphingopyxis fribergensis
         sphp  Sphingopyxis sp. 113P3
         smag  Sphingopyxis macrogoltabida EY-1
         smaz  Sphingopyxis macrogoltabida 203
         sphx  Sphingopyxis sp. PAMC25046
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       Sphingomonas (17)
         span  Sphingomonas panacis
         splm  Sphingomonas sp. LM7
         sphc  Sphingomonas sp. Cra20
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       Sphingobium (15)
         ssy  Sphingobium sp. SYK-6
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       Citromicrobium (1)
       Sphingorhabdus (3)
       Blastomonas (2)
       Rhizorhabdus (1)
       Sphingosinicella (2)
         smic  Sphingosinicella microcystinivorans
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       Tardibacter (1)
       Sphingosinithalassobacter (1)
       Hankyongella (1)
       Erythrobacter (8)
       Altererythrobacter (7)
         ado  Altererythrobacter dongtanensis
         alb  Altererythrobacter sp. B11
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       Croceicoccus (2)
       Porphyrobacter (4)
       Gluconobacter (5)
       Granulobacter (4)
         gbe  Granulibacter bethesdensis CGDNIH1
         gbh  Granulibacter bethesdensis CGDNIH2
         gbc  Granulibacter bethesdensis NIH3.1
         gbs  Granulibacter bethesdensis CGDNIH4
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       Acidiphilium (2)
         acr  Acidiphilium cryptum
         amv  Acidiphilium multivorum
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       Gluconacetobacter (2)
       Komagataeibacter (6)
         gxl  Komagataeibacter xylinus
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       Acetobacter (19)
       Asaia (1)
       Kozakia (1)
       Roseomonas (3)
         rgi  Roseomonas gilardii
         ros  Roseomonas sp. FDAARGOS_362
         rmuc  Roseomonas mucosa
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       Neoasaia (1)
       Commensalibacter (2)
       Stella (2)
         shum  Stella humosa
         svc  Stella vacuolata
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       Neokomagataea (2)
         ntn  Neokomagataea tanensis
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       Swingsia (2)
       Bombella (2)
       Rhodospirillum (3)
         rru  Rhodospirillum rubrum ATCC 11170
         rrf  Rhodospirillum rubrum F11
         rce  Rhodospirillum centenum
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       Pararhodospirillum (1)
         rpm  Pararhodospirillum photometricum
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       Magnetospirillum (5)
         mgy  Magnetospirillum gryphiswaldense MSR-1 v2
         mgry  Magnetospirillum gryphiswaldense MSR-1
         magx  Magnetospirillum sp. XM-1
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       Azospirillum (10)
         azl  Azospirillum sp. B510
         ali  Azospirillum lipoferum
         ati  Azospirillum thiophilum
         azm  Azospirillum sp. M2T2B2
         azz  Azospirillum sp. CFH 70021
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       Tistrella (1)
         tmo  Tistrella mobilis
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       Endolissoclinum (2)
       Thalassospira (3)
         txi  Thalassospira xiamenensis
         tii  Thalassospira indica
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       Magnetospira (1)
       Haematospirillum (1)
       Nitrospirillum (1)
       Niveispirillum (1)
       Ferrovibrio (1)
         fer  Ferrovibrio terrae
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       Hypericibacter (2)
         htq  Hypericibacter terrae
         hadh  Hypericibacter adhaerens
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       Parvularcula (1)
       Magnetococcus (1)
       Pelagibacter (3)
       Unclassified Pelagibacteraceae (2)
         apc  Alpha proteobacterium HIMB59
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       Emcibacter (1)
         ecog  Emcibacter congregatus
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       Micavibrio (2)
         mai  Micavibrio aeruginosavorus ARL-13
         man  Micavibrio aeruginosavorus EPB
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       Polymorphum (1)
         pgv  Polymorphum gilvum
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       Phreatobacter (2)
         phr  Phreatobacter cathodiphilus
         pstg  Phreatobacter stygius
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       Puniceispirillum (1)
         apb  Candidatus Puniceispirillum marinum
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     Oligoflexia (12)
       Bdellovibrio (8)
       Halobacteriovorax (2)
         hax  Halobacteriovorax sp. BALOs_7
   2/42
       Bacteriovorax (1)
         bsto  Bacteriovorax stolpii
   3/42
       Unclassified Silvanigrellales (1)
     Other proteobacteria (10)
       Acidithiobacillus (7)
         afr  Acidithiobacillus ferrooxidans ATCC 23270
         afe  Acidithiobacillus ferrooxidans ATCC 53993
         atx  Acidithiobacillus thiooxidans
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       Mariprofundus (2)
       Hydrogenophilus (1)
     Firmicutes - Bacilli (815)
       Bacillus (140)
         bss  Bacillus subtilis subsp. spizizenii W23
         ban  Bacillus anthracis Ames
         bar  Bacillus anthracis Ames Ancestor
         bat  Bacillus anthracis Sterne
         bah  Bacillus anthracis CDC 684
         bai  Bacillus anthracis A0248
         bax  Bacillus anthracis H9401
         bant  Bacillus anthracis A16
         banr  Bacillus anthracis A16R
         bans  Bacillus anthracis SVA11
         banh  Bacillus anthracis HYU01
         banv  Bacillus anthracis Vollum
         bce  Bacillus cereus ATCC 14579
         bca  Bacillus cereus ATCC 10987
         bcz  Bacillus cereus E33L
         bcr  Bacillus cereus AH187
         bcb  Bacillus cereus B4264
         bcu  Bacillus cereus AH820
         bcg  Bacillus cereus G9842
         bcq  Bacillus cereus Q1
         bcx  Bacillus cereus 03BB102
         bal  Bacillus cereus biovar anthracis CI
         bnc  Bacillus cereus NC7401
         bcf  Bacillus cereus F837/76
         bcer  Bacillus cereus FRI-35
         bcy  Bacillus cytotoxicus
         btk  Bacillus thuringiensis serovar konkukian 97-27
         btl  Bacillus thuringiensis Al Hakam
         btb  Bacillus thuringiensis BMB171
         btt  Bacillus thuringiensis serovar kurstaki HD73
         bthr  Bacillus thuringiensis serovar kurstaki YBT-1520
         bthi  Bacillus thuringiensis serovar kurstaki HD-1
         btc  Bacillus thuringiensis serovar chinensis CT-43
         btf  Bacillus thuringiensis serovar finitimus YBT-020
         btm  Bacillus thuringiensis MC28
         btg  Bacillus thuringiensis Bt407
         bti  Bacillus thuringiensis HD-771
         btn  Bacillus thuringiensis HD-789
         btht  Bacillus thuringiensis serovar thuringiensis IS5056
         bthu  Bacillus thuringiensis YBT-1518
         btw  Bacillus thuringiensis HD1011
         bthy  Bacillus thuringiensis YWC2-8
         bwe  Bacillus mycoides KBAB4
         bww  Bacillus mycoides WSBC 10204
         bmyo  Bacillus mycoides ATCC 6462
         bty  Bacillus toyonensis
         bby  Bacillus bombysepticus
         bwd  Bacillus wiedmannii
         bmq  Bacillus megaterium QM B1551
         bmd  Bacillus megaterium DSM 319
         bmh  Bacillus megaterium WSH-002
         bmeg  Bacillus megaterium NBRC 15308 = ATCC 14581
         baci  Bacillus sp. 1NLA3E
         beo  Bacillus filamentosus
         bon  Bacillus oceanisediminis
         bko  Bacillus kochii
         bmur  Bacillus muralis
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       Oceanobacillus (3)
         oih  Oceanobacillus iheyensis
         ocn  Oceanobacillus sp. 160
         ocb  Oceanobacillus sp. 143
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       Geobacillus (18)
       Parageobacillus (3)
         ptb  Parageobacillus toebii NBRC 107807
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       Anoxybacillus (6)
       Amphibacillus (1)
       Lysinibacillus (8)
         lsp  Lysinibacillus sphaericus
         lgy  Lysinibacillus varians
         lfu  Lysinibacillus fusiformis
         lys  Lysinibacillus sp. YS11
         lyb  Lysinibacillus sp. B2A1
         lpak  Lysinibacillus pakistanensis
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       Halobacillus (3)
         hhd  Halobacillus halophilus
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       Terribacillus (1)
       Virgibacillus (7)
         vhl  Virgibacillus halodenitrificans
         vig  Virgibacillus sp. 6R
         vne  Virgibacillus necropolis
         vpn  Virgibacillus dokdonensis
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       Lentibacillus (1)
         lao  Lentibacillus amyloliquefaciens
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       Fictibacillus (2)
       Salimicrobium (1)
       Aeribacillus (1)
       Aquibacillus (1)
       Psychrobacillus (2)
       Pradoshia (1)
       Gracilibacillus (1)
         grc  Gracilibacillus sp. SCU50
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       Salicibibacter (2)
         rue  Salicibibacter kimchii
   3/42
       Pontibacillus (1)
       Sporolactobacillus (1)
         stea  Sporolactobacillus terrae
   5/42
       Unclassified Sporolactobacillaceae (1)
       Staphylococcus (92)
         sca  Staphylococcus carnosus
         snl  Staphylococcus nepalensis
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       Macrococcus (3)
       Salinicoccus (1)
         shv  Salinicoccus halodurans
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       Auricoccucs (1)
       Listeria (47)
       Brochothrix (1)
       Exiguobacterium (5)
       Gemella (5)
       Brevibacillus (5)
         bbe  Brevibacillus brevis
         blr  Brevibacillus laterosporus
         bfm  Brevibacillus formosus
         brw  Brevibacillus sp. 7WMA2
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       Paenibacillus (48)
         pjd  Paenibacillus sp. JDR-2
         gym  Paenibacillus sp. Y412MC10
         ppy  Paenibacillus polymyxa E681
         ppm  Paenibacillus polymyxa SC2
         ppo  Paenibacillus polymyxa M1
         ppol  Paenibacillus polymyxa CR1
         ppq  Paenibacillus polymyxa SQR-21
         ppoy  Paenibacillus polymyxa Sb3-1
         pms  Paenibacillus mucilaginosus KNP414
         pmq  Paenibacillus mucilaginosus 3016
         pmw  Paenibacillus mucilaginosus K02
         pta  Paenibacillus terrae
         plv  Paenibacillus larvae
         pbd  Paenibacillus borealis
         paen  Paenibacillus sp. FSL P4-0081
         pih  Paenibacillus sp. IHBB 10380
         ppeo  Paenibacillus peoriae
         pow  Paenibacillus sp. 32O-W
         pbv  Paenibacillus bovis
         pswu  Paenibacillus swuensis
         pdh  Paenibacillus donghaensis
         pib  Paenibacillus ihbetae
         pkb  Paenibacillus kribbensis
         paih  Paenibacillus sp. IHB B 3084
         pvo  Paenibacillus vortex
         plw  Paenibacillus lautus
         ppsc  Paenibacillus psychroresistens
         plut  Paenibacillus lutimineralis
         palb  Paenibacillus albus
         pchi  Paenibacillus chitinolyticus
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       Thermobacillus (1)
       Aneurinibacillus (2)
         anx  Aneurinibacillus sp. XH2
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       Cohnella (2)
         cohn  Cohnella sp. HS21
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       Saccharibacillus (1)
         saca  Saccharibacillus brassicae
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       Alicyclobacillus (2)
       Kyrpidia (2)
         bts  Kyrpidia tusciae
         kyr  Kyrpidia spormannii
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       Tumebacillus (2)
         tum  Tumebacillus avium
         tab  Tumebacillus algifaecis
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       Solibacillus (3)
       Planococcus (11)
         pku  Planococcus kocurii
         pana  Planococcus antarcticus
         pfae  Planococcus faecalis
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       Jeotgalibacillus (1)
       Kurthia (2)
         kur  Kurthia sp. 11kri321
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       Sporosarcina (6)
         spsy  Sporosarcina psychrophila
   2/42
       Rummeliibacillus (1)
       Paenisporosarcina (2)
       Planomicrobium (2)
       Novibacillus (1)
         ntr  Novibacillus thermophilus
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       Laceyella (1)
       Thermoactinomyces (1)
       Kroppenstedtia (2)
       Lactococcus (19)
       Streptococcus (148)
         snx  Streptococcus pneumoniae OXC141 (serotype 3)
         spne  Streptococcus pneumoniae SPN034156 (serotype 3)
         spnu  Streptococcus pneumoniae SPN034183 (serotype 3)
         spnm  Streptococcus pneumoniae SPN994038 (serotype 3)
         spno  Streptococcus pneumoniae SPN994039 (serotype 3)
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       Lactobacillus (101)
         lpl  Lactobacillus plantarum WCFS1
         lpj  Lactobacillus plantarum JDM1
         lpt  Lactobacillus plantarum ZJ316
         lps  Lactobacillus plantarum subsp. plantarum ST-III
         lpr  Lactobacillus plantarum subsp. plantarum P-8
         lpz  Lactobacillus plantarum 16
         lpb  Lactobacillus plantarum B21
         lgn  Lactobacillus ginsenosidimutans
         lhi  Lactobacillus heilongjiangensis
         lpx  Lactobacillus paraplantarum
         lct  Lactobacillus crustorum
         lpg  Lactobacillus pentosus
         lalw  Lactobacillus allii
         lali  Lactobacillus alimentarius
         lfm  Lactobacillus farciminis
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       Pediococcus (6)
       Enterococcus (23)
         efc  Enterococcus faecium Aus0004
         efau  Enterococcus faecium Aus0085
         efu  Enterococcus faecium DO
         efm  Enterococcus faecium ATCC 8459 = NRRL B-2354
         eft  Enterococcus faecium T110
         emu  Enterococcus mundtii
         eav  Enterococcus avium
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       Melissococcus (2)
       Tetragenococcus (4)
       Vagococcus (5)
         vpi  Vagococcus penaei
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       Oenococcus (3)
       Leuconostoc (13)
       Weissella (11)
         wei  Weissella sp. 26KH-42
   2/42
       Aerococcus (7)
         asan  Aerococcus sanguinicola
         auh  Aerococcus urinaehominis
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       Abiotrophia (1)
       Unclassified Aerococcaceae (1)
       Carnobacterium (6)
         crn  Carnobacterium sp. 17-4
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       Marinilactibacillus (1)
       Jeotgalibaca (5)
       Dolosigranulum (1)
     Firmicutes - Clostridia (231)
       Clostridium (54)
         ctc  Clostridium tetani E88
         ctet  Clostridium tetani 12124569
         cba  Clostridium botulinum A ATCC 19397
         cbh  Clostridium botulinum A Hall
         cby  Clostridium botulinum A2
         cbl  Clostridium botulinum A3 Loch Maree
         cbb  Clostridium botulinum B1 Okra
         cbi  Clostridium botulinum Ba4
         cbf  Clostridium botulinum F Langeland
         cbm  Clostridium botulinum F 230613
         cbe  Clostridium beijerinckii NCIMB 8052
         cbz  Clostridium beijerinckii ATCC 35702
         cbei  Clostridium beijerinckii NCIMB 14988
         csr  Clostridium saccharoperbutylacetonicum
         cpas  Clostridium pasteurianum BC1
         cpat  Clostridium pasteurianum DSM 525 = ATCC 6013
         cpae  Clostridium pasteurianum DSM 525 = ATCC 6013
         csb  Clostridium saccharobutylicum
         cbv  Clostridium baratii
         cld  Clostridium sporogenes
         cbut  Clostridium butyricum
         carg  Clostridium argentinense
         cdy  Clostridium diolis
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       Alkaliphilus (2)
         amt  Alkaliphilus metalliredigens
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       Arthromitus (4)
       Geosporobacter (1)
       Hathewaya (1)
       Caloramator (1)
       Crassaminicella (1)
       Caloranaerobacter (1)
       Mageeibacillus (1)
       Fastidiosipila (1)
         fsa  Fastidiosipila sanguinis
   2/42
       Hungateiclostridium (4)
       Unclassified Hungateiclostridiaceae (1)
         ruk  Hungateiclostridiaceae bacterium KB18
   3/42
       Ruminiclostridium (1)
       Thermoclostridium (2)
       Pseudoclostridium (1)
       Unclassified Ruminococcaceae (4)
         esr  Eubacterium siraeum V10Sc8a
         esu  Eubacterium siraeum 70/3
         ccel  Clostridium cellulosi
         rbp  Ruminococcaceae bacterium CPB6
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       Flavonifractor (1)
       Ethanoligenens (1)
         eha  Ethanoligenens harbinense
   2/42
       Ruminococcus (5)
         ral  Ruminococcus albus
         rch  Ruminococcus champanellensis
         rus  Ruminococcus bicirculans
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       Faecalibacterium (2)
         fpr  Faecalibacterium prausnitzii L2-6
   2/42
       Caproiciproducens (1)
         capr  Caproiciproducens sp. NJN-50
   3/42
       Butyrivibrio (3)
       Cellulosilyticum (2)
         cle  Cellulosilyticum lentocellum
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       Roseburia (3)
       Coprococcus (2)
       Blautia (6)
         byl  Blautia sp. YL58
         blau  Blautia sp. N6H1-15
         bpro  Blautia producta
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       Lachnoclostridium (3)
       Lacrimispora (2)
         cso  Clostridium cf. saccharolyticum K10
   2/42
       Anaerostipes (2)
         arf  Anaerostipes rhamnosivorans
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       Herbinix (1)
       Anaerotignum (1)
       Lachnoanaerobaculum (1)
       Anaerobutyricum (1)
         ehl  Anaerobutyricum hallii
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       Pseudobutyrivibrio (1)
       Anaerocolumna (1)
       Lachnospira (1)
       Mediterraneibacter (1)
       Enterocloster (1)
         cbol  Enterocloster bolteae
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       Unclassified Lachnospiraceae (4)
       Clostridioides (5)
         cdf  Clostridioides difficile 630
         pdc  Clostridioides difficile 630
         cdc  Clostridioides difficile CD196
         cdl  Clostridioides difficile R20291
         pdf  Clostridioides difficile 630Derm
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       Peptoclostridium (1)
       Acetoanaerobium (1)
       Filifactor (1)
         faa  Filifactor alocis
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       Paeniclostridium (1)
       Romboutsia (1)
       Peptacetobacter (1)
       Unclassified Peptostreptococcaceae (1)
       Symbiobacterium (1)
       Syntrophomonas (1)
       Syntrophothermus (1)
       Syntrophocurvum (1)
       Desulfitobacterium (5)
         dsy  Desulfitobacterium hafniense Y51
         dhd  Desulfitobacterium hafniense DCB-2
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       Desulfotomaculum (4)
       Desulfofarcimen (1)
       Desulfofundulus (1)
         dku  Desulfofundulus kuznetsovii
   3/42
       Desulfallas (1)
       Pelotomaculum (1)
       Desulforudis (1)
       Thermincola (1)
       Syntrophobotulus (1)
       Desulfosporosinus (3)
         dai  Desulfosporosinus acidiphilus
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       Dehalobacter (3)
       Heliobacterium (1)
       Heliorestis (1)
       Eubacterium (3)
         elm  Eubacterium callanderi
         emt  Eubacterium maltosivorans
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       Acetobacterium (1)
       Oscillibacter (1)
       Dysosmobacter (1)
         obj  Oscillospiraceae bacterium J115
   2/42
       Thermaerobacter (3)
       Sulfobacillus (3)
       Carboxydocella (1)
       Christensenella (1)
       Intestinimonas (1)
       Mogibacterium (1)
       Aminipila (3)
       Unclassified Clostridiales (4)
       Caldanaerobacter (1)
       Thermoanaerobacter (8)
       Carboxydothermus (1)
       Tepidanaerobacter (2)
       Moorella (3)
       Ammonifex (1)
       Thermacetogenium (1)
       Caldicellulosiruptor (9)
       Thermosediminibacter (1)
       Thermoanaerobacterium (4)
       Thermodesulfobium (2)
       Mahella (1)
       Natranaerobius (1)
       Halothermothrix (1)
       Halanaerobium (2)
         has  Halanaerobium hydrogeniformans
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       Halocella (1)
       Acetohalobium (1)
       Halobacteroides (1)
       Anoxybacter (1)
     Firmicutes - Others (46)
       Finegoldia (1)
       Anaerococcus (1)
         apr  Anaerococcus prevotii
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       Parvimonas (1)
       Peptoniphilus (3)
       Gottschalkia (1)
       Sporanaerobacter (1)
       Veillonella (4)
       Megasphaera (3)
         meg  Megasphaera sp. AJH120
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       Dialister (2)
       Selenomonas (5)
         ssg  Selenomonas sputigena
         sele  Selenomonas sp. oral taxon 478
         selo  Selenomonas sp. oral taxon 136
         selt  Selenomonas sp. oral taxon 920
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       Megamonas (2)
         mfun  Megamonas funiformis
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       Pelosinus (2)
         pft  Pelosinus fermentans
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       Methylomusa (1)
       Sporomusa (1)
       Acidaminococcus (2)
       Phascolarctobacterium (1)
         pfac  Phascolarctobacterium faecium
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       Erysipelothrix (5)
       Faecalitalea (1)
       Turicibacter (2)
         tur  Turicibacter sp. H121
         tsg  Turicibacter sanguinis
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       Faecalibaculum (1)
       Absiella (2)
         aarg  Absiella argi
         absi  Absiella sp. 9CBEGH2
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       Erysipelatoclostridium (1)
         ciu  Clostridium innocuum
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       Unclassified Erysipelotrichaceae (2)
         erb  Erysipelotrichaceae bacterium I46
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       Limnochorda (1)
     Tenericutes (157)
       Mycoplasma (97)
       Ureaplasma (4)
       Hepatoplasma (1)
       Phytoplasma (8)
       Acholeplasma (6)
       Mesoplasma (8)
       Entomoplasma (4)
       Spiroplasma (26)
       Izimaplasma (1)
       Unclassified Tenericutes (2)
 
 
 
 
 
 
 
 
 
 
     Actinobacteria (749)
       Mycobacterium (73)
         mfj  Mycobacterium florentinum
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       Mycolicibacterium (21)
         mva  Mycolicibacterium vanbaalenii
         mgo  Mycolicibacterium goodii
         mphl  Mycolicibacterium phlei
         mll  Mycolicibacterium litorale
         mthn  Mycolicibacterium thermoresistibile
         mhas  Mycolicibacterium hassiacum
         mcht  Mycolicibacterium chitae
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       Mycobacteroides (9)
       Mycolicibacter (3)
       Hoyosella (1)
       Mycolicibacillus (1)
         mkr  Mycolicibacillus koreensis
   2/42
       Corynebacterium (100)
       Nocardia (10)
         nbr  Nocardia brasiliensis
         nsl  Nocardia mangyaensis
         ntp  Nocardia terpenica
         noz  Nocardia sp. CS682
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       Rhodococcus (20)
         roa  Rhodococcus opacus PD630
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       Gordonia (11)
         god  Gordonia sp. 135
   3/42
       Tsukamurella (2)
       Segniliparus (1)
       Dietzia (5)
       Lawsonella (1)
       Tomitella (1)
       Streptomyces (70)
         sco  Streptomyces coelicolor
         salb  Streptomyces albidoflavus
         sma  Streptomyces avermitilis
         scb  Streptomyces scabiei
         ssx  Streptomyces sp. SirexAA-E
         sct  Streptomyces cattleya NRRL 8057 = DSM 46488
         scy  Streptomyces cattleya NRRL 8057 = DSM 46488
         sfa  Streptomyces pratensis
         shy  Streptomyces hygroscopicus subsp. jinggangensis 5008
         sho  Streptomyces hygroscopicus subsp. jinggangensis TL01
         sdv  Streptomyces davaonensis
         sals  Streptomyces albus DSM 41398
         sfi  Streptomyces fulvissimus
         src  Streptomyces rapamycinicus
         salu  Streptomyces albulus NK660
         sall  Streptomyces albulus ZPM
         slv  Streptomyces lividans
         stre  Streptomyces sp. 769
         sld  Streptomyces lydicus A02
         slc  Streptomyces lydicus 103
         sxi  Streptomyces xiamenensis
         strc  Streptomyces sp. CNQ-509
         spri  Streptomyces pristinaespiralis
         scx  Streptomyces sp. CdTB01
         srw  Streptomyces reticuli
         strf  Streptomyces sp. 4F
         spav  Streptomyces parvulus
         strt  Streptomyces sp. SAT1
         sgs  Streptomyces griseochromogenes
         stsi  Streptomyces qaidamensis
         snr  Streptomyces noursei
         strd  Streptomyces sp. CCM_MD2014
         snw  Streptomyces niveus
         sauo  Streptomyces autolyticus
         ssia  Streptomyces alfalfae
         svu  Streptomyces violaceoruber
         spun  Streptomyces fodineus
         sgv  Streptomyces gilvosporeus
         salj  Streptomyces albireticuli
         stro  Streptomyces sp. MOE7
         sfk  Streptomyces formicae
         sge  Streptomyces griseorubiginosus
         srj  Streptomyces rochei
         sky  Streptomyces koyangensis
         sdx  Streptomyces dengpaensis
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       Kitasatospora (4)
         ksk  Kitasatospora setae
   3/42
       Streptacidiphilus (1)
       Tropheryma (2)
       Luteimicrobium (1)
       Leifsonia (3)
       Clavibacter (5)
         cmi  Clavibacter michiganensis subsp. michiganensis
   4/42
       Microbacterium (17)
         msed  Microbacterium sediminis
   2/42
       Rhodoluna (2)
       Aquiluna (1)
       Rathayibacter (7)
         rtx  Rathayibacter toxicus 70137
         rtc  Rathayibacter toxicus WAC3373
   2/42
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       Curtobacterium (4)
       Microterricola (1)
       Frondihabitans (1)
       Agromyces (3)
       Cryobacterium (2)
       Cnuibacter (1)
       Aurantimicrobium (3)
       Pontimonas (1)
       Microcella (1)
       Mycetocola (1)
       Salinibacterium (3)
       Humibacter (2)
       Gryllotalpicola (1)
       Protaetiibacter (1)
       Lysinimonas (1)
       Plantibacter (1)
       Leucobacter (3)
       Agrococcus (1)
       Marisediminicola (1)
       Herbiconiux (1)
       Arthrobacter (18)
         acit  Arthrobacter citreus
   2/42
       Psychromicrobium (1)
       Paenarthrobacter (1)
       Pseudarthrobacter (5)
       Glutamicibacter (4)
       Renibacterium (1)
       Kocuria (6)
       Micrococcus (2)
       Rothia (3)
       Sinomonas (1)
       Neomicrococcus (1)
       Auritidibacter (1)
       Citricoccus (1)
       Beutenbergia (1)
       Brachybacterium (7)
       Dermabacter (2)
       Jonesia (1)
       Kytococcus (1)
       Dermacoccus (2)
       Luteipulveratus (1)
         lmoi  Luteipulveratus mongoliensis
   2/42
       Xylanimonas (2)
       Isoptericola (2)
       Cellulosimicrobium (2)
       Xylanimicrobium (1)
       Sanguibacter (2)
       Cellulomonas (7)
         celh  Cellulomonas sp. H30R-01
   3/42
       Oerskovia (1)
       Pseudactinotalea (1)
       Intrasporangium (1)
       Arsenicicoccus (1)
       Serinicoccus (2)
       Janibacter (3)
       Ornithinimicrobium (2)
       Tetrasphaera (1)
       Phycicoccus (1)
       Brevibacterium (4)
       Dermatophilus (1)
       Georgenia (1)
       Cutibacterium (14)
       Propionibacterium (5)
       Pseudopropionibacterium (1)
       Acidipropionibacterium (4)
       Microlunatus (3)
       Tessaracoccus (4)
         tes  Tessaracoccus aquimaris
   2/42
       Raineyella (1)
       Propioniciclava (1)
       Nocardioides (8)
       Kribbella (1)
       Pimelobacter (1)
       Aeromicrobium (4)
       Micropruina (1)
       Thermobifida (1)
       Nocardiopsis (3)
       Streptomonospora (1)
       Thermomonospora (1)
       Actinomadura (1)
       Streptosporangium (1)
       Nonomuraea (2)
       Frankia (5)
         fra  Frankia casuarinae
         fri  Frankia inefficax
         fal  Frankia alni
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       Acidothermus (1)
       Nakamurella (2)
       Geodermatophilus (1)
       Blastococcus (1)
       Modestobacter (1)
       Kineococcus (1)
       Saccharopolyspora (3)
       Saccharomonospora (2)
       Amycolatopsis (11)
         amyc  Amycolatopsis sp. AA4
         amyy  Amycolatopsis sp. YIM 10
   3/42
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       Pseudonocardia (8)
         phh  Pseudonocardia sp. HH130630-07
   3/42
       Actinosynnema (2)
         apre  Actinosynnema pretiosum
   2/42
       Saccharothrix (2)
         ssyi  Saccharothrix syringae
   2/42
       Kutzneria (1)
       Kibdelosporangium (1)
       Lentzea (1)
       Actinoalloteichus (5)
         acta  Actinoalloteichus sp. AHMU CJ021
   2/42
       Alloactinosynnema (1)
       Prauserella (1)
       Salinispora (2)
         stp  Salinispora tropica
         saq  Salinispora arenicola
   3/42
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       Micromonospora (6)
       Verrucosispora (1)
       Actinoplanes (5)
       Plantactinospora (3)
       Phytohabitans (2)
       Catenulispora (1)
       Stackebrandtia (1)
         sna  Stackebrandtia nassauensis
   2/42
       Arcanobacterium (2)
       Mobiluncus (1)
       Trueperella (3)
         tbw  Trueperella bialowiezensis
   2/42
       Actinotignum (2)
       Schaalia (2)
       Actinomyces (11)
         ard  Actinomyces radicidentis
   3/42
       Flaviflexus (2)
       Bifidobacterium (56)
         bsca  Bifidobacterium scardovii
         bact  Bifidobacterium actinocoloniiforme
         bgx  Bifidobacterium gallinarum
   3/42
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       Gardnerella (3)
       Scardovia (1)
       Parascardovia (1)
       Thermobispora (1)
       Actinopolyspora (1)
       Planktophila (6)
       Nanopelagicus (3)
       Epidermidibacterium (1)
         eke  Epidermidibacterium keratini
   3/42
       Unclassified Actinobacteria (1)
       Rubrobacter (3)
         rub  Rubrobacter sp. SCSIO 52909
   5/42
       Baekduia (1)
       Conexibacter (1)
       Acidimicrobium (1)
       Ilumatobacter (1)
         aym  Ilumatobacter coccineus
   3/42
       Cryptobacterium (1)
       Slackia (1)
       Eggerthella (2)
         ele  Eggerthella lenta
   7/42
       Gordonibacter (1)
         gpa  Gordonibacter pamelaeae
   2/42
       Adlercreutzia (1)
         aeq  Adlercreutzia equolifaciens
   6/42
       Denitrobacterium (1)
       Atopobium (1)
       Olsenella (2)
         ols  Olsenella uli
   2/42
       Parolsenella (1)
       Coriobacterium (1)
       Collinsella (1)
       Unclassified Coriobacteriaceae (1)
       Egibacter (1)
       Euzebya (1)
     Cyanobacteria (128)
       Synechocystis (8)
       Synechococcus (23)
         cyb  Synechococcus sp. JA-2-3B'a(2-13)
         synd  Synechococcus sp. KORDI-52
   3/42
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       Thermosynechococcus (4)
       Cyanobium (2)
       Dactylococcopsis (1)
       Chamaesiphon (1)
       Leptolyngbya (4)
       Halomicronema (1)
       Pseudanabaena (2)
       Prochlorococcus (14)
         pmf  Prochlorococcus marinus MIT 9303
         pmg  Prochlorococcus marinus MIT 9301
   2/42
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       Acaryochloris (1)
       Thermoleptolyngbya (1)
       Gloeocapsa (1)
       Geminocystis (2)
       Chondrocystis (1)
       Microcystis (4)
       Cyanobacterium (3)
       Halothece (1)
       Euhalothece (1)
       Atelocyanobacterium (1)
       Crocosphaera (2)
       Rippkaea (2)
         cyp  Rippkaea orientalis PCC 8801
         cyh  Rippkaea orientalis PCC 8802
   3/42
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       Gloeothece (2)
       Cyanothece (1)
       Trichodesmium (1)
         ter  Trichodesmium erythraeum
   3/42
       Microcoleus (1)
       Arthrospira (1)
         arp  Arthrospira platensis
   2/42
       Planktothrix (1)
       Oxynema (1)
       Limnospira (1)
       Geitlerinema (1)
       Oscillatoria (2)
       Moorea (1)
         mpro  Moorea producens
   3/42
       Crinalium (1)
       Gloeobacter (2)
       Nostoc (8)
         ana  Nostoc sp. PCC 7120
         nop  Nostoc sp. PCC 7524
         nsh  Nostoc sphaeroides
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       Trichormus (2)
       Anabaena (4)
         acy  Anabaena cylindrica
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       Cylindrospermum (1)
       Calothrix (3)
         calo  Calothrix sp. PCC 7507
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       Rivularia (1)
       Fischerella (1)
       Nodularia (1)
         nsp  Nodularia spumigena
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       Dolichospermum (2)
       Tolypothrix (1)
         toq  Tolypothrix sp. PCC 7910
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       Unclassified Nostocales (1)
         ncn  Nostocales cyanobacterium HT-58-2
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       Chroococcidiopsis (1)
       Pleurocapsa (1)
         plp  Pleurocapsa sp. PCC 7327
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       Stanieria (2)
       Unclassified Cyanobacteria (2)
       Unclassified Melainabacteria (1)
     Chloroflexi (31)
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       Roseiflexus (2)
         rrs  Roseiflexus sp. RS-1
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       Chloroflexus (3)
         cau  Chloroflexus aurantiacus
         chl  Chloroflexus aurantiacus Y-400-fl
         cag  Chloroflexus aggregans
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       Herpetosiphon (1)
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         tro  Thermomicrobium roseum
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       Pelolinea (1)
       Unclassified Anaerolineaceae (1)
       Caldilinea (1)
         cap  Caldilinea aerophila
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       Promineofilum (1)
       Unclassified Ktedonobacterales (1)
         kbs  Ktedonobacterales bacterium SCAWS-G2
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       Tepidiforma (1)
     Deinococcus-Thermus (33)
       Deinococcus (16)
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     Other Terrabacteria group (3)
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     Chlamydiae (120)
       Chlamydia (114)
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         sng  Simkania negevensis
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     Verrucomicrobia (14)
       Opitutus (1)
         ote  Opitutus terrae
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       Lacunisphaera (1)
         obg  Lacunisphaera limnophila
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       Nibricoccus (1)
       Unclassified Opitutaceae (1)
       Coraliomargarita (1)
       Akkermansia (2)
         amu  Akkermansia muciniphila
         agl  Akkermansia glycaniphila
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       Roseimicrobium (1)
       Luteolibacter (1)
         luo  Luteolibacter sp. G-1-1-1
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       Xiphinematobacter (1)
       Methylacidiphilum (2)
       Unclassified Verrucomicrobia (2)
     Planctomycetes (31)
       Rhodopirellula (1)
       Pirellula (2)
         psl  Pirellula staleyi
         pir  Pirellula sp. SH-Sr6A
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       Roseimaritima (1)
         rul  Roseimaritima ulvae
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       Mariniblastus (1)
         mff  Mariniblastus fucicola
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       Thermogutta (1)
       Lacipirellula (1)
         lpav  Lacipirellula parvula
   2/42
       Planctopirus (2)
         plm  Planctopirus limnophila
         peh  Planctopirus ephydatiae
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       Rubinisphaera (1)
         pbs  Rubinisphaera brasiliensis
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       Planctomyces (2)
         pls  Planctomyces sp. SH-PL14
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       Fuerstia (1)
         fmr  Fuerstia marisgermanicae
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       Gimesia (2)
         gmr  Gimesia maris
         gim  Gimesia sp. E7
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       Bremerella (1)
         bvo  Bremerella volcania
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       Gemmata (3)
         ges  Gemmata sp. SH-PL17
         gog  Gemmata obscuriglobus
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       Tuwongella (1)
         tim  Tuwongella immobilis
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       Limnoglobus (1)
         lrs  Limnoglobus roseus
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       Isosphaera (1)
         ipa  Isosphaera pallida
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       Singulisphaera (1)
         saci  Singulisphaera acidiphila
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         agv  Aquisphaera giovannonii
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       Unclassified Victivallales (1)
         vbc  Victivallales bacterium CCUG 44730
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     Spirochaetes (86)
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       Treponema (23)
         tde  Treponema denticola
         tbe  Treponema brennaborense
         taz  Treponema azotonutricium
         tpi  Treponema primitia
         scd  Treponema caldarium
         tpk  Treponema putidum
         tphg  Treponema phagedenis
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       Sediminispirochaeta (1)
         ssm  Sediminispirochaeta smaragdinae
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       Spirochaeta (4)
         sta  Spirochaeta thermophila DSM 6192
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       Sphaerochaeta (3)
         sbu  Sphaerochaeta globosa
         sgp  Sphaerochaeta pleomorpha
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       Salinispira (1)
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         tpx  Turneriella parva
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       Brachyspira (9)
         bip  Brachyspira intermedia
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     Acidobacteria (13)
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         gma  Granulicella mallensis
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         sus  Candidatus Solibacter usitatus
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       Fusobacterium (13)
         fva  Fusobacterium varium
         ful  Fusobacterium ulcerans
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         str  Sebaldella termitidis
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         cpor  Cloacibacillus porcorum
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     Fibrobacteres (2)
       Fibrobacter (2)
         fsu  Fibrobacter succinogenes
         fsc  Fibrobacter succinogenes
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     Gemmatimonadetes (3)
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       Gemmatirosa (1)
         gba  Gemmatirosa kalamazoonesis
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     Bacteroidetes (359)
       Bacteroides (20)
         bth  Bacteroides thetaiotaomicron VPI-5482
         btho  Bacteroides thetaiotaomicron 7330
         bfr  Bacteroides fragilis YCH46
         bfs  Bacteroides fragilis NCTC 9343
         bfg  Bacteroides fragilis 638R
         bfb  Bacteroides fragilis BOB25
         bvu  Bacteroides vulgatus
         bsa  Bacteroides salanitronis
         bdo  Bacteroides dorei HS1_L_1_B_010
         bdh  Bacteroides dorei HS1_L_3_B_079
         boa  Bacteroides ovatus
         bcel  Bacteroides cellulosilyticus
         bcac  Bacteroides caccae
         bun  Bacteroides uniformis
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       Porphyromonas (6)
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       Paludibacter (1)
         ppn  Paludibacter propionicigenes
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       Parabacteroides (2)
         pdi  Parabacteroides distasonis
         parc  Parabacteroides sp. CT06
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       Tannerella (2)
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       Dysgonomonas (1)
         dys  Dysgonomonas sp. HDW5A
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       Odoribacter (1)
         osp  Odoribacter splanchnicus
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       Butyricimonas (1)
       Azobacteroides (1)
       Prevotella (10)
         pit  Prevotella intermedia
         poc  Prevotella oris
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       Alloprevotella (1)
       Alistipes (6)
       Mucinivorans (1)
       Unclassified Bacteroidales (1)
       Draconibacterium (2)
         drc  Draconibacterium sp. M1
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       Salinivirga (1)
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       Unclassified Rhodothermaceae (1)
         rbar  Rhodothermaceae bacterium RA
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       Chitinophaga (4)
         cpi  Chitinophaga pinensis
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       Niastella (1)
         nko  Niastella koreensis
   2/42
       Niabella (2)
       Flavisolibacter (2)
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       Filimonas (1)
       Pseudoflavitalea (1)
         pseg  Paraflavitalea soli
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       Panacibacter (1)
         pgin  Panacibacter ginsenosidivorans
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       Pseudobacter (1)
         pgo  Pseudobacter ginsenosidimutans
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       Flavihumibacter (1)
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       Pedobacter (7)
         pcm  Pedobacter cryoconitis
         psty  Pedobacter steynii
         pgs  Pedobacter ginsengisoli
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       Pseudopedobacter (1)
       Sphingobacterium (9)
       Solitalea (1)
       Mucilaginibacter (8)
         mup  Mucilaginibacter sp. PAMC 26640
         muc  Mucilaginibacter xinganensis
         mgot  Mucilaginibacter gotjawali
         muh  Mucilaginibacter sp. HYN0043
         mgin  Mucilaginibacter ginsenosidivorans
         mgk  Mucilaginibacter ginsenosidivorax
         mrub  Mucilaginibacter rubeus
         mgos  Mucilaginibacter gossypii
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       Anseongella (1)
       Olivibacter (1)
       Unclassified Sphingobacteriaceae (1)
         sbx  Sphingobacteriaceae bacterium GW460-11-11-14-LB5
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       Cyclobacterium (2)
         cmr  Cyclobacterium marinum
         camu  Cyclobacterium amurskyense
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       Belliella (1)
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       Dyadobacter (1)
         dfe  Dyadobacter fermentans
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       Spirosoma (6)
         sli  Spirosoma linguale
         srd  Spirosoma radiotolerans
         smon  Spirosoma montaniterrae
         spir  Spirosoma pollinicola
         spik  Spirosoma sp. KCTC 42546
         spib  Spirosoma sp. BT328
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       Leadbetterella (1)
       Runella (3)
         rsi  Runella slithyformis
         run  Runella sp. HYN0085
         rup  Runella sp. SP2
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       Emticicia (1)
         eol  Emticicia oligotrophica
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       Fibrella (2)
         fae  Fibrella aestuarina
         fib  Fibrella sp. ES10-3-2-2
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       Allopseudarcicella (1)
         psez  Allopseudarcicella aquatilis
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       Arcticibacterium (1)
         als  Arcticibacterium luteifluviistationis
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       Rhodocytophaga (1)
         rhoz  Rhodocytophaga sp. 172606-1
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       Flexibacter (1)
       Hymenobacter (10)
         hyz  Hymenobacter sp. PAMC 26628
         hnv  Hymenobacter nivis
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         fpf  Fabibacter pacificus
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       Unclassified Flammeovirgaceae (1)
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         chk  Chryseolinea soli
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       Gramella (4)
       Flavobacterium (25)
         fpsz  Flavobacterium psychrophilum Z2
         fjo  Flavobacterium johnsoniae UW101
         fjg  Flavobacterium anhuiense
         fcr  Flavobacterium crocinum
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       Capnocytophaga (13)
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       Zunongwangia (1)
         zpr  Zunongwangia profunda
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         ahz  Algibacter alginicilyticus
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       Sediminicola (1)
       Tenacibaculum (5)
         ten  Tenacibaculum sp. LPB0136
         tje  Tenacibaculum jejuense
         tmp  Tenacibaculum mesophilum
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       Lutibacter (1)
       Urechidicola (1)
         lul  Urechidicola croceus
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         aalg  Arenibacter algicola
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       Unclassified Flavobacteriaceae (3)
       Sulcia (9)
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     Balneolaeota (1)
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       Nitrospira (4)
         nde  Nitrospira defluvii
         nmv  Nitrospira moscoviensis
         nio  Candidatus Nitrospira inopinata
         nja  Nitrospira japonica
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       Leptospirillum (4)
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         thet  Thermodesulfobacterium sp. TA1
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     Other (4)
       Vampirococcus (1)
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       Chazhemtobacterium (1)
       Babela (1)
 
 
 
 
     Unclassified Bacteria (11)
 
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     Euryarchaeota (223)
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         metb  Methanosphaera sp. BMS
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         tar  Thermoplasmatales archaeon BRNA1
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         hma  Haloarcula marismortui
         hhi  Haloarcula hispanica ATCC 33960
         hhn  Haloarcula hispanica N601
         hta  Haloarcula taiwanensis
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       Natronomonas (2)
         nmo  Natronomonas moolapensis
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       Halorhabdus (3)
         hti  Halorhabdus tiamatea
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       Halomicrobium (3)
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         hsn  Halapricum salinum
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       Unclassified Haloarculaceae (1)
       Haloquadratum (2)
         hwa  Haloquadratum walsbyi DSM 16790
         hwc  Haloquadratum walsbyi C23
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         hae  Halohasta litchfieldiae
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         nas  Natronorubrum aibiense
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     Thaumarchaeota (18)
       Nitrosopumilus (6)
         nmr  Nitrosopumilus maritimus
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       Nitrosotalea (1)
     Korarchaeota (1)
       Korarchaeum (1)
 
     Bathyarchaeota (2)
       Unclassified Bathyarchaeota (2)
 
     Geothermarchaeota (1)
       Conexivisphaera (1)
 
     Nanoarchaeota (2)
       Nanoarchaeum (1)
       Nanopusillus (1)
 
 
     Micrarchaeota (1)
       Candidatus Mancarchaeum (1)
 
     Lokiarchaeota (2)
       Lokiarchaeum (1)
       Prometheoarchaeum (1)
         psyt  Candidatus Prometheoarchaeum syntrophicum
   2/42
     Unclassified Archaea (2)
       arg  Archaeon GW2011_AR20
   2/42

[ BRITE | KEGG2 | KEGG ]
Last updated: July 1, 2020

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