KEGG Organisms

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 Eukaryotes (541)
 
   Animals (250)
     Vertebrates (146)
       Mammals (66)
         hsa  Homo sapiens (human)
         ptr  Pan troglodytes (chimpanzee)
         pps  Pan paniscus (bonobo)
         ggo  Gorilla gorilla gorilla (western lowland gorilla)
         pon  Pongo abelii (Sumatran orangutan)
         nle  Nomascus leucogenys (northern white-cheeked gibbon)
         mcc  Macaca mulatta (rhesus monkey)
         mcf  Macaca fascicularis (crab-eating macaque)
         csab  Chlorocebus sabaeus (green monkey)
         rro  Rhinopithecus roxellana (golden snub-nosed monkey)
         rbb  Rhinopithecus bieti (black snub-nosed monkey)
         cjc  Callithrix jacchus (white-tufted-ear marmoset)
         sbq  Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
         mmu  Mus musculus (mouse)
         mcal  Mus caroli (Ryukyu mouse)
         mpah  Mus pahari (shrew mouse)
         rno  Rattus norvegicus (rat)
         mun  Meriones unguiculatus (Mongolian gerbil)
         cge  Cricetulus griseus (Chinese hamster)
         ngi  Nannospalax galili (Upper Galilee mountains blind mole rat)
         hgl  Heterocephalus glaber (naked mole rat)
         ccan  Castor canadensis (American beaver)
         ocu  Oryctolagus cuniculus (rabbit)
         tup  Tupaia chinensis (Chinese tree shrew)
         cfa  Canis familiaris (dog)
         vvp  Vulpes vulpes (red fox)
         aml  Ailuropoda melanoleuca (giant panda)
         umr  Ursus maritimus (polar bear)
         uah  Ursus arctos horribilis
         oro  Odobenus rosmarus divergens (Pacific walrus)
         elk  Enhydra lutris kenyoni (northern sea otter)
         fca  Felis catus (domestic cat)
         ptg  Panthera tigris altaica (Amur tiger)
         ppad  Panthera pardus (leopard)
         aju  Acinonyx jubatus (cheetah)
         bta  Bos taurus (cow)
         bom  Bos mutus (wild yak)
         biu  Bos indicus (zebu cattle)
         bbub  Bubalus bubalis (water buffalo)
         chx  Capra hircus (goat)
         oas  Ovis aries (sheep)
         ssc  Sus scrofa (pig)
         cfr  Camelus ferus (Wild Bactrian camel)
         cdk  Camelus dromedarius (Arabian camel)
         bacu  Balaenoptera acutorostrata scammoni (minke whale)
         lve  Lipotes vexillifer (Yangtze River dolphin)
         oor  Orcinus orca (killer whale)
         dle  Delphinapterus leucas (beluga whale)
         pcad  Physeter catodon (sperm whale)
         ecb  Equus caballus (horse)
         epz  Equus przewalskii (Przewalski's horse)
         eai  Equus asinus (ass)
         myb  Myotis brandtii (Brandt's bat)
         myd  Myotis davidii
         mna  Miniopterus natalensis
         hai  Hipposideros armiger (great roundleaf bat)
         dro  Desmodus rotundus (common vampire bat)
         pale  Pteropus alecto (black flying fox)
         ray  Rousettus aegyptiacus (Egyptian rousette)
         mjv  Manis javanica (Malayan pangolin)
         lav  Loxodonta africana (African savanna elephant)
         tmu  Trichechus manatus latirostris (Florida manatee)
         mdo  Monodelphis domestica (opossum)
         shr  Sarcophilus harrisii (Tasmanian devil)
         pcw  Phascolarctos cinereus (koala)
         oaa  Ornithorhynchus anatinus (platypus)
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       Birds (24)
         gga  Gallus gallus (chicken)
         mgp  Meleagris gallopavo (turkey)
         cjo  Coturnix japonica (Japanese quail)
         nmel  Numida meleagris (helmeted guineafowl)
         apla  Anas platyrhynchos (mallard)
         acyg  Anser cygnoides domesticus (swan goose)
         tgu  Taeniopygia guttata (zebra finch)
         lsr  Lonchura striata domestica (Bengalese finch)
         scan  Serinus canaria (common canary)
         gfr  Geospiza fortis (medium ground-finch)
         fab  Ficedula albicollis (collared flycatcher)
         phi  Pseudopodoces humilis (Tibetan ground-tit)
         pmaj  Parus major (Great Tit)
         ccae  Cyanistes caeruleus (blue tit)
         ccw  Corvus cornix (hooded crow)
         etl  Empidonax traillii (willow flycatcher)
         fpg  Falco peregrinus (peregrine falcon)
         fch  Falco cherrug (Saker falcon)
         clv  Columba livia (rock pigeon)
         egz  Egretta garzetta (little egret)
         nni  Nipponia nippon (crested ibis)
         acun  Athene cunicularia (burrowing owl)
         padl  Pygoscelis adeliae (Adelie penguin)
         aam  Apteryx mantelli mantelli (brown kiwi)
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       Reptiles (12)
         asn  Alligator sinensis (Chinese alligator)
         amj  Alligator mississippiensis (American alligator)
         pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
         cmy  Chelonia mydas (green sea turtle)
         cpic  Chrysemys picta (western painted turtle)
         acs  Anolis carolinensis (green anole)
         pvt  Pogona vitticeps (central bearded dragon)
         pbi  Python bivittatus (Burmese python)
         pmur  Protobothrops mucrosquamatus (Taiwan habu)
         tsr  Thamnophis sirtalis
         pmua  Podarcis muralis (common wall lizard)
         gja  Gekko japonicus
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       Amphibians (3)
         xla  Xenopus laevis (African clawed frog)
         xtr  Xenopus tropicalis (western clawed frog)
         npr  Nanorana parkeri
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       Fishes (39)
         dre  Danio rerio (zebrafish)
         srx  Sinocyclocheilus rhinocerous
         sanh  Sinocyclocheilus anshuiensis
         sgh  Sinocyclocheilus grahami
         ccar  Cyprinus carpio (common carp)
         ipu  Ictalurus punctatus (channel catfish)
         phyp  Pangasianodon hypophthalmus (striped catfish)
         amex  Astyanax mexicanus (Mexican tetra)
         eee  Electrophorus electricus (electric eel)
         tru  Takifugu rubripes (torafugu)
         tng  Tetraodon nigroviridis (spotted green pufferfish)
         lco  Larimichthys crocea (large yellow croaker)
         ncc  Notothenia coriiceps (black rockcod)
         mze  Maylandia zebra (zebra mbuna)
         onl  Oreochromis niloticus (Nile tilapia)
         ola  Oryzias latipes (Japanese medaka)
         xma  Xiphophorus maculatus (southern platyfish)
         xco  Xiphophorus couchianus (Monterrey platyfish)
         pret  Poecilia reticulata (guppy)
         cvg  Cyprinodon variegatus (sheepshead minnow)
         nfu  Nothobranchius furzeri (turquoise killifish)
         kmr  Kryptolebias marmoratus (mangrove rivulus)
         alim  Austrofundulus limnaeus (annual killifish)
         aoce  Amphiprion ocellaris (clown anemonefish)
         csem  Cynoglossus semilaevis (tongue sole)
         pov  Paralichthys olivaceus (Japanese flounder)
         lcf  Lates calcarifer (barramundi perch)
         sdu  Seriola dumerili (greater amberjack)
         slal  Seriola lalandi dorsalis (Yellowtail amberjack)
         hcq  Hippocampus comes (tiger tail seahorse)
         bpec  Boleophthalmus pectinirostris (great blue-spotted mudskipper)
         malb  Monopterus albus (swamp eel)
         sasa  Salmo salar (Atlantic salmon)
         otw  Oncorhynchus tshawytscha (Chinook salmon)
         salp  Salvelinus alpinus (Arctic char)
         els  Esox lucius (northern pike)
         sfm  Scleropages formosus (Asian bonytongue)
         pki  Paramormyrops kingsleyae
         lcm  Latimeria chalumnae (coelacanth)
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       Cartilaginous fishes (2)
         cmk  Callorhinchus milii (elephant shark)
         rtp  Rhincodon typus (whale shark)
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     Lancelets (1)
       bfo  Branchiostoma floridae (Florida lancelet)
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     Ascidians (1)
       cin  Ciona intestinalis (sea squirt)
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     Echinoderms (2)
       spu  Strongylocentrotus purpuratus (purple sea urchin)
       aplc  Acanthaster planci (crown-of-thorns starfish)
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     Hemichordates (1)
       sko  Saccoglossus kowalevskii (acorn worm)
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     Arthropods (72)
       Insects (65)
         dme  Drosophila melanogaster (fruit fly)
         der  Drosophila erecta
         dse  Drosophila sechellia
         dsi  Drosophila simulans
         dya  Drosophila yakuba
         dan  Drosophila ananassae
         dsr  Drosophila serrata
         dpo  Drosophila pseudoobscura pseudoobscura
         dpe  Drosophila persimilis
         dmn  Drosophila miranda
         dwi  Drosophila willistoni
         dgr  Drosophila grimshawi
         dmo  Drosophila mojavensis
         daz  Drosophila arizonae
         dnv  Drosophila navojoa
         dhe  Drosophila hydei
         dvi  Drosophila virilis
         mde  Musca domestica (house fly)
         lcq  Lucilia cuprina (Australian sheep blowfly)
         aga  Anopheles gambiae (mosquito)
         aag  Aedes aegypti (yellow fever mosquito)
         aalb  Aedes albopictus (Asian tiger mosquito)
         cqu  Culex quinquefasciatus (southern house mosquito)
         ame  Apis mellifera (honey bee)
         bim  Bombus impatiens (common eastern bumble bee)
         bter  Bombus terrestris (buff-tailed bumblebee)
         ccal  Ceratina calcarata (carpenter bee)
         obb  Osmia bicornis bicornis
         soc  Solenopsis invicta (red fire ant)
         mpha  Monomorium pharaonis (pharaoh ant)
         aec  Acromyrmex echinatior (Panamanian leafcutter ant)
         acep  Atta cephalotes (leaf cutting ant)
         pbar  Pogonomyrmex barbatus (red harvester ant)
         vem  Vollenhovia emeryi
         hst  Harpegnathos saltator (Jerdon's jumping ant)
         dqu  Dinoponera quadriceps
         cfo  Camponotus floridanus (Florida carpenter ant)
         lhu  Linepithema humile (Argentine ant)
         pgc  Pseudomyrmex gracilis
         obo  Ooceraea biroi (clonal raider ant)
         pcf  Polistes canadensis
         nvi  Nasonia vitripennis (jewel wasp)
         csol  Ceratosolen solmsi marchali
         mdl  Microplitis demolitor
         tca  Tribolium castaneum (red flour beetle)
         dpa  Dendroctonus ponderosae (mountain pine beetle)
         atd  Aethina tumida (small hive beetle)
         nvl  Nicrophorus vespilloides
         bmor  Bombyx mori (domestic silkworm)
         bman  Bombyx mandarina (wild silkworm)
         dpl  Danaus plexippus (monarch butterfly)
         pmac  Papilio machaon (common yellow swallowtail)
         prap  Pieris rapae (cabbage white)
         haw  Helicoverpa armigera (cotton bollworm)
         tnl  Trichoplusia ni (cabbage looper)
         pxy  Plutella xylostella (diamondback moth)
         api  Acyrthosiphon pisum (pea aphid)
         dnx  Diuraphis noxia (Russian wheat aphid)
         ags  Aphis gossypii (cotton aphid)
         rmd  Rhopalosiphum maidis (corn leaf aphid)
         btab  Bemisia tabaci (sweet potato whitefly)
         clec  Cimex lectularius (bed bug)
         phu  Pediculus humanus corporis (human body louse)
         zne  Zootermopsis nevadensis
         fcd  Folsomia candida
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       Crustaceans (2)
         dpx  Daphnia pulex (common water flea)
         pvm  Penaeus vannamei (Pacific white shrimp)
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       Chelicerates (5)
         isc  Ixodes scapularis (black-legged tick)
         tut  Tetranychus urticae (two-spotted spider mite)
         dpte  Dermatophagoides pteronyssinus (European house dust mite)
         cscu  Centruroides sculpturatus (bark scorpion)
         ptep  Parasteatoda tepidariorum (common house spider)
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     Nematodes (6)
       cel  Caenorhabditis elegans (nematode)
       cbr  Caenorhabditis briggsae
       bmy  Brugia malayi (filaria)
       loa  Loa loa (eye worm)
       nai  Necator americanus
       tsp  Trichinella spiralis
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     Annelids (1)
       hro  Helobdella robusta
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     Mollusks (5)
       lgi  Lottia gigantea (owl limpet)
       pcan  Pomacea canaliculata (golden apple snail)
       crg  Crassostrea gigas (Pacific oyster)
       myi  Mizuhopecten yessoensis (Yesso scallop)
       obi  Octopus bimaculoides
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     Brachiopodas (1)
       lak  Lingula anatina
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     Flatworms (4)
       smm  Schistosoma mansoni
       shx  Schistosoma haematobium
       ovi  Opisthorchis viverrini
       egl  Echinococcus granulosus
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     Cnidarians (8)
       nve  Nematostella vectensis (sea anemone)
       epa  Exaiptasia pallida
       adf  Acropora digitifera (stony coral)
       amil  Acropora millepora
       pdam  Pocillopora damicornis (lace coral)
       spis  Stylophora pistillata
       dgt  Dendronephthya gigantea (soft corals)
       hmg  Hydra vulgaris
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     Placozoans (1)
       tad  Trichoplax adhaerens
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     Poriferans (1)
       aqu  Amphimedon queenslandica (sponge)
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   Plants (106)
     Eudicots (75)
       Mustard family (9)
         ath  Arabidopsis thaliana (thale cress)
         aly  Arabidopsis lyrata (lyrate rockcress)
         crb  Capsella rubella
         csat  Camelina sativa (false flax)
         eus  Eutrema salsugineum
         brp  Brassica rapa (field mustard)
         bna  Brassica napus (rape)
         boe  Brassica oleracea (wild cabbage)
         rsz  Raphanus sativus (radish)
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       Caper family (1)
         thj  Tarenaya hassleriana (spider flower)
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       Papaya family (1)
         cpap  Carica papaya (papaya)
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       Rue family (2)
         cit  Citrus sinensis (Valencia orange)
         cic  Citrus clementina (mandarin orange)
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       Mallow family (5)
         tcc  Theobroma cacao (cacao)
         gra  Gossypium raimondii
         ghi  Gossypium hirsutum (upland cotton)
         gab  Gossypium arboreum
         dzi  Durio zibethinus (durian)
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       Myrtle family (1)
         egr  Eucalyptus grandis (rose gum)
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       Pea family (13)
         gmx  Glycine max (soybean)
         gsj  Glycine soja (wild soybean)
         pvu  Phaseolus vulgaris (common bean)
         vra  Vigna radiata (mung bean)
         var  Vigna angularis (adzuki bean)
         vun  Vigna unguiculata (cowpea)
         ccaj  Cajanus cajan (pigeon pea)
         mtr  Medicago truncatula (barrel medic)
         cam  Cicer arietinum (chickpea)
         lja  Lotus japonicus
         adu  Arachis duranensis
         aip  Arachis ipaensis
         lang  Lupinus angustifolius (narrow-leaved blue lupine)
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       Rose family (7)
         fve  Fragaria vesca (woodland strawberry)
         rcn  Rosa chinensis (China rose)
         pper  Prunus persica (peach)
         pmum  Prunus mume (Japanese apricot)
         pavi  Prunus avium (sweet cherry)
         mdm  Malus domestica (apple)
         pxb  Pyrus x bretschneideri (Chinese white pear)
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       Buckthorn family (1)
         zju  Ziziphus jujuba (Chinese jujube)
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       Cucumber family (6)
         csv  Cucumis sativus (cucumber)
         cmo  Cucumis melo (muskmelon)
         mcha  Momordica charantia (bitter melon)
         cmax  Cucurbita maxima (winter squash)
         cmos  Cucurbita moschata (crookneck pumpkin)
         cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
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       Spurge family (4)
         rcu  Ricinus communis (castor bean)
         jcu  Jatropha curcas
         hbr  Hevea brasiliensis (rubber tree)
         mesc  Manihot esculenta (cassava)
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       Willow family (2)
         pop  Populus trichocarpa (black cottonwood)
         peu  Populus euphratica (Euphrates poplar)
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       Walnut family (1)
         jre  Juglans regia (English walnut)
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       Beech family (1)
         qsu  Quercus suber (cork oak)
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       Grape family (1)
         vvi  Vitis vinifera (wine grape)
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       Nightshade family (8)
         sly  Solanum lycopersicum (tomato)
         spen  Solanum pennellii
         sot  Solanum tuberosum (potato)
         cann  Capsicum annuum
         nta  Nicotiana tabacum (common tobacco)
         nsy  Nicotiana sylvestris
         nto  Nicotiana tomentosiformis
         nau  Nicotiana attenuata
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       Morning-glory family (1)
         ini  Ipomoea nil (Japanese morning glory)
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       Sesame family (1)
         sind  Sesamum indicum (sesame)
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       Olive family (1)
         oeu  Olea europaea var. sylvestris (wild olive)
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       Daisy family (3)
         han  Helianthus annuus (common sunflower)
         lsv  Lactuca sativa (garden lettuce)
         ccav  Cynara cardunculus var. scolymus (artichoke)
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       Parsley family (1)
         dcr  Daucus carota (carrot)
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       Amaranth family (3)
         bvg  Beta vulgaris (sugar beet)
         soe  Spinacia oleracea (spinach)
         cqi  Chenopodium quinoa (quinoa)
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       Lotus family (1)
         nnu  Nelumbo nucifera (sacred lotus)
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       Poppy family (1)
         psom  Papaver somniferum (opium poppy)
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     Monocots (14)
       Grass family (8)
         osa  Oryza sativa japonica (Japanese rice) (RefSeq)
         dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
         obr  Oryza brachyantha (malo sina)
         bdi  Brachypodium distachyon
         ats  Aegilops tauschii (wheat D)
         sbi  Sorghum bicolor (sorghum)
         zma  Zea mays (maize)
         sita  Setaria italica (foxtail millet)
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       Palm family (2)
         pda  Phoenix dactylifera (date palm)
         egu  Elaeis guineensis (African oil palm)
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       Banana family (1)
         mus  Musa acuminata (wild Malaysian banana)
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       Orchid family (2)
         dct  Dendrobium catenatum
         peq  Phalaenopsis equestris
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       Asparagus family (1)
         aof  Asparagus officinalis (garden asparagus)
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     Basal Magnoliophyta (1)
       Amborella family (1)
         atr  Amborella trichopoda
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     Ferns (1)
       smo  Selaginella moellendorffii
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     Mosses (1)
       ppp  Physcomitrium patens
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     Green algae (11)
       cre  Chlamydomonas reinhardtii
       vcn  Volvox carteri f. nagariensis
       mng  Monoraphidium neglectum
       csl  Coccomyxa subellipsoidea
       cvr  Chlorella variabilis
       apro  Auxenochlorella protothecoides
       olu  Ostreococcus lucimarinus
       ota  Ostreococcus tauri
       bpg  Bathycoccus prasinos
       mis  Micromonas commoda
       mpp  Micromonas pusilla
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     Red algae (3)
       cme  Cyanidioschyzon merolae
       gsl  Galdieria sulphuraria
       ccp  Chondrus crispus (carragheen)
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   Fungi (133)
     Ascomycetes (95)
       Saccharomycetes (32)
         sce  Saccharomyces cerevisiae (budding yeast)
         ago  Ashbya gossypii (Eremothecium gossypii)
         erc  Eremothecium cymbalariae
         kla  Kluyveromyces lactis
         kmx  Kluyveromyces marxianus
         lth  Lachancea thermotolerans
         vpo  Vanderwaltozyma polyspora
         zro  Zygosaccharomyces rouxii
         cgr  Candida glabrata
         ncs  Naumovozyma castellii
         ndi  Naumovozyma dairenensis
         tpf  Tetrapisispora phaffii
         tbl  Tetrapisispora blattae
         tdl  Torulaspora delbrueckii
         kaf  Kazachstania africana
         ppa  Komagataella phaffii
         dha  Debaryomyces hansenii
         pic  Scheffersomyces stipitis
         pgu  Meyerozyma guilliermondii
         spaa  Spathaspora passalidarum
         lel  Lodderomyces elongisporus
         cal  Candida albicans
         ctp  Candida tropicalis
         cot  Candida orthopsilosis
         cdu  Candida dubliniensis
         cten  Yamadazyma tenuis
         yli  Yarrowia lipolytica
         clu  Clavispora lusitaniae ATCC 42720
         clus  Clavispora lusitaniae CBS 6936
         caur  Candida auris
         slb  Sugiyamaella lignohabitans
         pkz  Pichia kudriavzevii
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       Sordariomycetes (27)
         ncr  Neurospora crassa
         nte  Neurospora tetrasperma
         smp  Sordaria macrospora
         pan  Podospora anserina
         ttt  Thermothielavioides terrestris
         mtm  Thermothelomyces thermophilus
         cthr  Chaetomium thermophilum
         mgr  Pyricularia oryzae
         tmn  Phaeoacremonium minimum
         ssck  Sporothrix schenckii
         fgr  Fusarium graminearum
         fpu  Fusarium pseudograminearum
         fvr  Fusarium verticillioides
         fox  Fusarium oxysporum
         nhe  Nectria haematococca
         tre  Trichoderma reesei QM6a
         trr  Trichoderma reesei RUT C-30
         maw  Metarhizium acridum
         maj  Metarhizium robertsii
         cmt  Cordyceps militaris
         plj  Purpureocillium lilacinum
         val  Verticillium alfalfae
         vda  Verticillium dahliae
         cfj  Colletotrichum fioriniae
         sapo  Scedosporium apiospermum
         ela  Eutypa lata
         pfy  Pestalotiopsis fici
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       Leotiomycetes (5)
         ssl  Sclerotinia sclerotiorum
         bfu  Botrytis cinerea
         mbe  Marssonina brunnea
         psco  Phialocephala scopiformis
         glz  Glarea lozoyensis
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       Eurotiomycetes (19)
         ani  Aspergillus nidulans
         afm  Aspergillus fumigatus
         act  Aspergillus clavatus
         nfi  Aspergillus fischeri
         aor  Aspergillus oryzae
         ang  Aspergillus niger
         afv  Aspergillus flavus
         pcs  Penicillium rubens
         pdp  Penicillium digitatum
         tmf  Talaromyces marneffei
         cim  Coccidioides immitis
         cpw  Coccidioides posadasii
         pbl  Paracoccidioides lutzii Pb01
         pbn  Paracoccidioides brasiliensis
         ure  Uncinocarpus reesii
         abe  Trichophyton benhamiae
         tve  Trichophyton verrucosum
         aje  Histoplasma capsulatum
         bgh  Blastomyces gilchristii
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       Dothideomycetes (10)
         pno  Parastagonospora nodorum
         pte  Pyrenophora teres
         bze  Bipolaris zeicola
         bsc  Bipolaris sorokiniana
         bor  Bipolaris oryzae
         aalt  Alternaria alternata
         ztr  Zymoseptoria tritici
         pfj  Pseudocercospora fijiensis
         bcom  Baudoinia panamericana
         npa  Neofusicoccum parvum
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       Pezizomycetes (1)
         tml  Tuber melanosporum
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       Schizosaccharomycetes (1)
         spo  Schizosaccharomyces pombe (fission yeast)
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     Basidiomycetes (33)
       cne  Cryptococcus neoformans var. neoformans JEC21
       cnb  Cryptococcus neoformans var. neoformans B-3501A
       cgi  Cryptococcus gattii
       tms  Tremella mesenterica
       tasa  Trichosporon asahii var. asahii
       tvs  Trametes versicolor
       dsq  Dichomitus squalens
       pco  Phanerochaete carnosa
       shs  Stereum hirsutum
       hir  Heterobasidion irregulare
       psq  Punctularia strigosozonata
       adl  Auricularia subglabra
       fme  Fomitiporia mediterranea
       gtr  Gloeophyllum trabeum
       lbc  Laccaria bicolor
       mpr  Moniliophthora perniciosa
       mrr  Moniliophthora roreri
       cci  Coprinopsis cinerea
       scm  Schizophyllum commune
       abp  Agaricus bisporus var. burnettii JB137-S8
       abv  Agaricus bisporus var. bisporus H97
       cput  Coniophora puteana
       sla  Serpula lacrymans
       wse  Wallemia mellicola
       wic  Wallemia ichthyophaga
       uma  Ustilago maydis
       pfp  Anthracocystis flocculosa
       mgl  Malassezia globosa
       mrt  Malassezia restricta
       msym  Malassezia sympodialis
       pgr  Puccinia graminis
       mlr  Melampsora larici-populina
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     Microsporidians (5)
       ecu  Encephalitozoon cuniculi
       ein  Encephalitozoon intestinalis
       ehe  Encephalitozoon hellem
       ero  Encephalitozoon romaleae
       nce  Nosema ceranae
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   Protists (52)
     Choanoflagellates (2)
       mbr  Monosiga brevicollis
       sre  Salpingoeca rosetta
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     Amoebozoa (7)
       Dictyostelia (3)
         dpp  Dictyostelium purpureum (cellular slime mold)
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       Entamoeba (3)
       Acanthamoeba (1)
         acan  Acanthamoeba castellanii
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     Alveolates (21)
       Apicomplexans (18)
         pfa  Plasmodium falciparum 3D7
         pfh  Plasmodium falciparum HB3
         pyo  Plasmodium yoelii
         pcb  Plasmodium chabaudi
         pbe  Plasmodium berghei
         pkn  Plasmodium knowlesi
         pvx  Plasmodium vivax
         pcy  Plasmodium cynomolgi
         cpv  Cryptosporidium parvum
         cho  Cryptosporidium hominis
         tgo  Toxoplasma gondii
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       Ciliates (2)
       Dinoflagellates (1)
         smin  Breviolum minutum
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     Stramenopiles (8)
       Diatoms (3)
         pti  Phaeodactylum tricornutum
         fcy  Fragilariopsis cylindrus
         tps  Thalassiosira pseudonana
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       Eustigmatophytes (1)
         ngd  Nannochloropsis gaditana
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       Pelagophytes (1)
         aaf  Aureococcus anophagefferens
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       Oomycetes (3)
         pif  Phytophthora infestans
         psoj  Phytophthora sojae
         spar  Saprolegnia parasitica
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     Haptophyta (1)
       ehx  Emiliania huxleyi
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     Cryptomonads (1)
       gtt  Guillardia theta
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     Euglenozoa (9)
       Kinetoplasts (9)
 
     Heterolobosea (1)
       Tetramitia (1)
         ngr  Naegleria gruberi
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     Metamonada (2)
       Trichomonads (1)
         tva  Trichomonas vaginalis
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       Diplomonads (1)
 
 Prokaryotes (6097)
 
   Bacteria (5772)
     Gammaproteobacteria - Enterobacteria (510)
       Escherichia (69)
       Salmonella (54)
       Shigella (13)
       Enterobacter (31)
       Cronobacter (11)
       Klebsiella (42)
       Citrobacter (15)
       Gibbsiella (1)
       Blochmannia (6)
       Hamiltonella (1)
       Unclassified aphid symbionts (2)
       Unclassified mealybug symbionts (1)
       Riesia (2)
       Moranella (2)
       Shimwellia (1)
       Raoultella (6)
       Cedecea (4)
       Pluralibacter (3)
       Kosakonia (5)
       Kluyvera (2)
       Ishikawaella (1)
       Leclercia (6)
       Lelliottia (4)
       Limnobaculum (1)
       Buttiauxella (1)
       Tachikawaea (1)
       Doolittlea (1)
       Hoaglandella (1)
       Gullanella (1)
       Mikella (1)
       Purcelliella (1)
       Metakosakonia (1)
       Atlantibacter (1)
       Izhakiella (1)
       Yokenella (1)
       Scandinavium (1)
       Unclassified Enterobacteria (4)
       Yersinia (46)
       Serratia (24)
       Chania (1)
       Rahnella (4)
       Fukatsuia (1)
       Pectobacterium (13)
       Sodalis (4)
       Dickeya (11)
       Brenneria (3)
       Lonsdalea (1)
       Erwinia (11)
       Buchnera (18)
       Wigglesworthia (2)
       Pantoea (17)
       Mixta (4)
       Tatumella (2)
       Photorhabdus (4)
       Proteus (8)
       Xenorhabdus (7)
       Providencia (9)
       Morganella (1)
       Arsenophonus (3)
       Edwardsiella (8)
       Hafnia (2)
       Obesumbacterium (1)
       Pragia (2)
       Leminorella (1)
       Phytobacter (2)
       Plesiomonas (1)
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
     Gammaproteobacteria - Others (839)
       Haemophilus (22)
       Glaesserella (5)
       Histophilus (2)
       Pasteurella (8)
       Basfia (2)
       Mannheimia (15)
       Actinobacillus (10)
       Aggregatibacter (9)
       Gallibacterium (1)
       Bibersteinia (4)
       Avibacterium (2)
       Rodentibacter (2)
       Otariodibacter (1)
       Frederiksenia (1)
       Bisgaardia (1)
       Xylella (9)
       Xanthomonas (38)
       Stenotrophomonas (11)
       Pseudoxanthomonas (3)
       Lysobacter (11)
       Luteimonas (3)
       Thermomonas (2)
       Pseudolysobacter (1)
       Frateuria (1)
       Rhodanobacter (2)
       Dyella (4)
       Dokdonella (1)
       Luteibacter (2)
       Ahniella (1)
       Aerosticca (1)
       Vibrio (53)
       Aliivibrio (4)
       Photobacterium (3)
       Grimontia (1)
       Paraphotobacterium (1)
       Salinivibrio (3)
       Pseudomonas (114)
         por  Pseudomonas oryzihabitans
         ppsl  Pseudomonas psychrotolerans
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       Azotobacter (4)
       Oblitimonas (1)
       Permianibacter (1)
       Psychrobacter (12)
       Acinetobacter (47)
       Moraxella (8)
       Unclassified Moraxellaceae (1)
       Shewanella (34)
       Idiomarina (5)
       Colwellia (7)
       Litorilituus (1)
       Thalassotalea (2)
       Pseudoalteromonas (23)
       Marinobacter (12)
       Alteromonas (23)
       Glaciecola (2)
       Paraglaciecola (2)
       Lacimicrobium (1)
       Catenovulum (1)
       Saliniradius (1)
       Salinimonas (2)
       Hydrocarboniclastica (1)
       Psychromonas (2)
       Ferrimonas (2)
       Moritella (3)
       Cellvibrio (5)
         cja  Cellvibrio japonicus
         ceb  Cellvibrio sp. PSBB023
         cell  Cellvibrio sp. PSBB006
         cek  Cellvibrio sp. KY-YJ-3
         ceg  Cellvibrio sp. KY-GH-1
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       Saccharophagus (1)
       Teredinibacter (1)
       Simiduia (1)
         saga  Simiduia agarivorans
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       Spongiibacter (1)
       Zhongshania (1)
       Oceanicoccus (1)
       Microbulbifer (6)
       Halioglobus (2)
       Kineobactrum (1)
       Coxiella (8)
       Rickettsiella (1)
       Aquicella (2)
       Legionella (23)
       Tatlockia (1)
       Methylococcus (2)
         mca  Methylococcus capsulatus
         metu  Methylococcus sp. IM1
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       Methylomonas (5)
       Methylomicrobium (2)
       Methylovulum (1)
       Methylocaldum (1)
       Methylospira (1)
       Francisella (43)
         frc  Francisella frigiditurris
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       Allofrancisella (2)
       Hydrogenovibrio (2)
       Thiomicrospira (3)
       Methylophaga (2)
       Cycloclasticus (3)
       Piscirickettsia (1)
       Thiomicrorhabdus (1)
       Thioploca (1)
       Beggiatoa (1)
       Nitrosococcus (4)
       Allochromatium (1)
       Thiocystis (1)
       Thioflavicoccus (1)
       Marichromatium (1)
       Tenderia (1)
       Nitrosoglobus (1)
       Thiodictyon (1)
       Rheinheimera (1)
       Thermochromatium (1)
       Alkalilimnicola (1)
       Halorhodospira (2)
       Ectothiorhodospira (2)
       Thioalkalivibrio (5)
       Spiribacter (4)
       Acidihalobacter (1)
       Halothiobacillus (2)
       Wenzhouxiangella (1)
       Woeseia (1)
       Granulosicoccus (1)
       Guyparkeria (1)
       Thiohalobacter (1)
       Hahella (2)
       Chromohalobacter (1)
       Halomonas (18)
       Portiera (9)
       Carsonella (7)
       Evansia (1)
       Zymobacter (1)
       Halotalea (1)
       Cobetia (1)
       Kushneria (3)
       Pistricoccus (1)
       Alcanivorax (5)
       Ketobacter (1)
       Kangiella (4)
       Marinomonas (3)
       Thalassolituus (2)
       Oleispira (1)
       Marinobacterium (1)
       Bacterioplanes (1)
       Neptunomonas (1)
       Nitrincola (1)
       Bermanella (1)
       Gynuella (1)
       Reinekea (1)
       Oleiphilus (1)
       Litoricola (1)
       Aeromonas (22)
       Tolumonas (1)
       Oceanimonas (1)
       Oceanisphaera (2)
       Zobellella (1)
       Dichelobacter (1)
       Cardiobacterium (1)
       Gilliamella (1)
       Frischella (1)
       Orbus (1)
       Steroidobacter (1)
       Solimonas (1)
       Sinimarinibacterium (1)
         sini  Sinimarinibacterium sp. NLF-5-8
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       Immundisolibacter (1)
       Sulfuricaulis (1)
       Sulfurifustis (1)
       Acidiferrobacter (1)
       Salinisphaera (1)
       Thiolapillus (1)
       Sedimenticola (1)
       Thioglobus (3)
       Pseudohongiella (1)
       Nardonella (1)
       Reidiella (1)
       Ruthia (1)
       Vesicomyosocius (1)
       Unclassified Gammaproteobacteria (6)
     Betaproteobacteria (445)
       Neisseria (29)
       Snodgrassella (1)
       Kingella (1)
       Vitreoscilla (2)
       Eikenella (2)
       Simonsiella (1)
       Unclassified Neisseriaceae (1)
         nba  Neisseriaceae bacterium DSM 100970
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       Chromobacterium (7)
       Iodobacter (1)
       Laribacter (1)
       Pseudogulbenkiania (1)
       Jeongeupia (1)
       Aquaspirillum (1)
       Aquitalea (2)
       Deefgea (1)
         dee  Deefgea sp. D17
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       Ralstonia (13)
       Cupriavidus (13)
       Burkholderia (89)
       Paraburkholderia (18)
       Mycetohabitans (1)
       Polynucleobacter (4)
       Pandoraea (14)
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       Bordetella (24)
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       Kerstersia (1)
       Rhodoferax (6)
       Polaromonas (5)
       Acidovorax (11)
       Verminephrobacter (1)
       Delftia (4)
       Variovorax (6)
       Comamonas (5)
       Alicycliphilus (2)
       Ramlibacter (1)
       Symbiobacter (1)
       Ottowia (2)
         oto  Ottowia sp. oral taxon 894
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       Limnohabitans (2)
       Hydrogenophaga (6)
       Diaphorobacter (2)
       Simplicispira (1)
       Melaminivora (2)
       Serpentinomonas (2)
       Methylibium (2)
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       Janthinobacterium (8)
       Herbaspirillum (6)
       Zinderia (1)
       Collimonas (3)
       Massilia (10)
       Oxalobacter (1)
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       Leptothrix (1)
       Thiomonas (2)
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       Roseateles (1)
       Paucibacter (1)
       Mitsuaria (1)
       Rhizobacter (1)
       Aquabacterium (1)
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       Unclassified Burkholderiales (3)
       Nitrosomonas (7)
       Nitrosospira (2)
       Sulfuritalea (1)
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       Thiobacillus (1)
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       Nitrotoga (1)
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       Azoarcus (9)
       Thauera (5)
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       Tremblaya (3)
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       Unclassified Betaproteobacteria (3)
     Epsilonproteobacteria (187)
       Helicobacter (76)
       Wolinella (1)
       Sulfurimonas (5)
       Sulfuricurvum (2)
       Campylobacter (67)
       Arcobacter (13)
       Aliiarcobacter (2)
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       Pseudoarcobacter (1)
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       Sulfurospirillum (7)
       Hydrogenimonas (1)
       Nitratifractor (1)
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       Sulfurovum (2)
       Nautilia (2)
       Caminibacter (1)
       Cetia (1)
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
     Deltaproteobacteria (90)
       Geobacter (11)
         gur  Geobacter uraniireducens
         geo  Geobacter daltonii FRC-32
         geb  Geobacter sp. M18
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       Geoalkalibacter (1)
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       Anaeromyxobacter (4)
       Myxococcus (3)
         mxa  Myxococcus xanthus
         msd  Myxococcus stipitatus
         mym  Myxococcus hansupus
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       Corallococcus (3)
         ccx  Corallococcus coralloides
         mfu  Corallococcus macrosporus
         mmas  Myxococcus macrosporus
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       Stigmatella (1)
       Archangium (1)
         age  Archangium gephyra
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       Melittangium (1)
         mbd  Melittangium boletus
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       Cystobacter (1)
         cfus  Cystobacter fuscus
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         samy  Sandaracinus amylolyticus
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     Alphaproteobacteria (703)
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       Bradyrhizobium (18)
         bja  Bradyrhizobium diazoefficiens USDA 110
         bju  Bradyrhizobium japonicum USDA 6
         bjp  Bradyrhizobium japonicum E109
         bra  Bradyrhizobium sp. ORS 278
         bbt  Bradyrhizobium sp. BTAi1
         brs  Bradyrhizobium sp. S23321
         aol  Bradyrhizobium oligotrophicum
         brc  Bradyrhizobium sp. CCGE-LA001
         brad  Bradyrhizobium sp. BF49
         bic  Bradyrhizobium icense
         bro  Bradyrhizobium sp. ORS 285
         brk  Bradyrhizobium sp. SK17
         bot  Bradyrhizobium ottawaense
         brq  Bradyrhizobium amphicarpaeae
         bgq  Bradyrhizobium guangdongense
         bgz  Bradyrhizobium guangzhouense
         bsym  Bradyrhizobium symbiodeficiens
         bbet  Bradyrhizobium betae
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         aex  Asticcacaulis excentricus
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       Unclassified Caulobacteraceae (1)
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         hba  Hirschia baltica
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       Novosphingobium (10)
         nar  Novosphingobium aromaticivorans
         npp  Novosphingobium sp. PP1Y
         npn  Novosphingobium pentaromativorans
         nre  Novosphingobium resinovorum
         nov  Novosphingobium sp. P6W
         nor  Novosphingobium sp. ABRDHK2
         ngf  Novosphingobium ginsenosidimutans
         nog  Novosphingobium sp. Gsoil 351
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       Sphingopyxis (12)
       Sphingomonas (17)
         stax  Sphingomonas taxi
         sphi  Sphingomonas hengshuiensis
         ssan  Sphingomonas sanxanigenens
         snj  Sphingomonas sp. NIC1
         smy  Sphingomonas melonis
         span  Sphingomonas panacis
         skr  Sphingomonas koreensis
         splm  Sphingomonas sp. LM7
         splk  Sphingomonas sp. LK11
         sphc  Sphingomonas sp. Cra20
         sphf  Sphingomonas sp. FARSPH
         spau  Sphingomonas paucimobilis
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       Sphingobium (15)
         ssy  Sphingobium sp. SYK-6
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       Citromicrobium (1)
         cij  Citromicrobium sp. JL477
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         spzr  Sphingosinithalassobacter sp. zrk23
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       Hankyongella (1)
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       Erythrobacter (8)
         eli  Erythrobacter litoralis HTCC2594
         elq  Erythrobacter litoralis DSM 8509
         ery  Erythrobacter atlanticus
         egn  Erythrobacter gangjinensis
         efv  Erythrobacter flavus
         erk  Erythrobacter sp. KY5
         err  Erythrobacter sp. YH-07
         erf  Erythrobacter sp. THAF29
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       Altererythrobacter (7)
         aay  Altererythrobacter atlanticus
         amx  Altererythrobacter marensis
         aep  Altererythrobacter epoxidivorans
         anh  Altererythrobacter namhicola
         ado  Altererythrobacter dongtanensis
         alb  Altererythrobacter sp. B11
         alh  Altererythrobacter sp. BO-6
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       Croceicoccus (2)
         cna  Croceicoccus naphthovorans
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       Porphyrobacter (4)
         pns  Porphyrobacter neustonensis
         porl  Porphyrobacter sp. LM 6
         phz  Porphyrobacter sp. HT-58-2
         pot  Porphyrobacter sp. YT40
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       Gluconobacter (5)
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         magx  Magnetospirillum sp. XM-1
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     Oligoflexia (12)
       Bdellovibrio (8)
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       Bacteriovorax (1)
       Unclassified Silvanigrellales (1)
 
 
 
 
     Other proteobacteria (10)
       Acidithiobacillus (7)
       Mariprofundus (2)
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     Firmicutes - Bacilli (817)
       Bacillus (140)
         bmq  Bacillus megaterium QM B1551
         bmd  Bacillus megaterium DSM 319
         bmh  Bacillus megaterium WSH-002
         bmeg  Bacillus megaterium NBRC 15308 = ATCC 14581
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       Oceanobacillus (3)
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       Staphylococcus (92)
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       Paenibacillus (49)
         pjd  Paenibacillus sp. JDR-2
         ppm  Paenibacillus polymyxa SC2
         ppo  Paenibacillus polymyxa M1
         ppol  Paenibacillus polymyxa CR1
         ppq  Paenibacillus polymyxa SQR-21
         ppoy  Paenibacillus polymyxa Sb3-1
         pta  Paenibacillus terrae
         plv  Paenibacillus larvae
         psab  Paenibacillus sabinae
         pdu  Paenibacillus durus
         pbd  Paenibacillus borealis
         pgm  Paenibacillus graminis
         pod  Paenibacillus odorifer
         paen  Paenibacillus sp. FSL P4-0081
         pste  Paenibacillus stellifer
         pri  Paenibacillus riograndensis
         ppeo  Paenibacillus peoriae
         pyg  Paenibacillus yonginensis
         pdh  Paenibacillus donghaensis
         plen  Paenibacillus lentus
         ppsc  Paenibacillus psychroresistens
         pchi  Paenibacillus chitinolyticus
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       Thermobacillus (1)
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         coh  Cohnella candidum
         cohn  Cohnella sp. HS21
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       Jeotgalibaca (5)
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     Firmicutes - Clostridia (231)
       Clostridium (54)
         clb  Clostridium sp. BNL1100
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       Hungateiclostridium (4)
         cth  Hungateiclostridium thermocellum ATCC 27405
         ctx  Hungateiclostridium thermocellum DSM 1313
         ccl  Hungateiclostridium clariflavum
         hsc  Hungateiclostridium saccincola
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       Unclassified Hungateiclostridiaceae (1)
         ruk  Hungateiclostridiaceae bacterium KB18
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       Ruminiclostridium (1)
         cce  Ruminiclostridium cellulolyticum
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         fpla  Flavonifractor plautii
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         cle  Cellulosilyticum lentocellum
         cew  Cellulosilyticum sp. WCF-2
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         dor  Desulfosporosinus orientis
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       Dehalobacter (3)
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         elm  Eubacterium callanderi
         emt  Eubacterium maltosivorans
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         say  Sulfobacillus acidophilus TPY
         sap  Sulfobacillus acidophilus DSM 10332
         sthr  Sulfobacillus thermotolerans
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       Carboxydocella (1)
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         cmiu  Christensenella minuta
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       Intestinimonas (1)
         ibu  Intestinimonas butyriciproducens
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       Caldicellulosiruptor (9)
         csc  Caldicellulosiruptor saccharolyticus
         ate  Caldicellulosiruptor bescii
         cob  Caldicellulosiruptor obsidiansis
         ckn  Caldicellulosiruptor kronotskyensis
         clc  Caldicellulosiruptor lactoaceticus
         ccha  Caldicellulosiruptor changbaiensis
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       Thermosediminibacter (1)
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     Firmicutes - Others (46)
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       Erysipelothrix (5)
       Faecalitalea (1)
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       Faecalibaculum (1)
       Absiella (2)
       Erysipelatoclostridium (1)
       Unclassified Erysipelotrichaceae (2)
       Limnochorda (1)
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
     Tenericutes (158)
       Mycoplasma (98)
       Ureaplasma (4)
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       Phytoplasma (8)
       Acholeplasma (6)
       Mesoplasma (8)
       Entomoplasma (4)
       Spiroplasma (26)
       Izimaplasma (1)
       Unclassified Tenericutes (2)
 
 
 
 
 
 
 
 
 
 
     Actinobacteria (751)
       Mycobacterium (73)
         mtu  Mycobacterium tuberculosis H37Rv
         mtv  Mycobacterium tuberculosis H37Rv
         mtc  Mycobacterium tuberculosis CDC1551
         mra  Mycobacterium tuberculosis H37Ra
         mtf  Mycobacterium tuberculosis F11
         mtb  Mycobacterium tuberculosis KZN 1435
         mtk  Mycobacterium tuberculosis KZN 4207
         mtz  Mycobacterium tuberculosis KZN 605
         mtg  Mycobacterium tuberculosis RGTB327
         mte  Mycobacterium tuberculosis CCDC5079
         mtur  Mycobacterium tuberculosis CCDC5079
         mtl  Mycobacterium tuberculosis CCDC5180
         mto  Mycobacterium tuberculosis CTRI-2
         mtd  Mycobacterium tuberculosis UT205
         mtn  Mycobacterium tuberculosis Erdman = ATCC 35801
         mtj  Mycobacterium tuberculosis Beijing/NITR203
         mtub  Mycobacterium tuberculosis 7199-99
         mtuc  Mycobacterium tuberculosis CAS/NITR204
         mtue  Mycobacterium tuberculosis EAI5/NITR206
         mtx  Mycobacterium tuberculosis EAI5
         mtuh  Mycobacterium tuberculosis Haarlem/NITR202
         mtul  Mycobacterium tuberculosis Haarlem
         mtut  Mycobacterium tuberculosis BT1
         mtuu  Mycobacterium tuberculosis BT2
         mtq  Mycobacterium tuberculosis HKBS1
         mbo  Mycobacterium tuberculosis variant bovis AF2122/97
         mbb  Mycobacterium tuberculosis variant bovis BCG Pasteur 1173P2
         mbt  Mycobacterium tuberculosis variant bovis BCG Tokyo 172
         mbm  Mycobacterium tuberculosis variant bovis BCG Mexico
         mbk  Mycobacterium tuberculosis variant bovis BCG Korea 1168P
         mbx  Mycobacterium tuberculosis variant bovis BCG ATCC 35743
         maf  Mycobacterium tuberculosis variant africanum
         mmic  Mycobacterium tuberculosis variant microti
         mce  Mycobacterium canettii CIPT 140010059
         mcq  Mycobacterium canettii CIPT 140060008
         mcv  Mycobacterium canettii CIPT 140070008
         mcx  Mycobacterium canettii CIPT 140070010
         mcz  Mycobacterium canettii CIPT 140070017
         mle  Mycobacterium leprae TN
         mlb  Mycobacterium leprae Br4923
         mpa  Mycobacterium avium subsp. paratuberculosis K-10
         mao  Mycobacterium avium subsp. paratuberculosis MAP4
         mavi  Mycobacterium avium subsp. paratuberculosis E1
         mavu  Mycobacterium avium subsp. paratuberculosis E93
         mav  Mycobacterium avium 104
         mit  Mycobacterium intracellulare MOTT-02
         mia  Mycobacterium intracellulare ATCC 13950
         mid  Mycobacterium intracellulare subsp. intracellulare
         myo  Mycobacterium intracellulare subsp. yongonense
         mir  Mycobacterium paraintracellulare
         mchi  Mycobacterium chimaera
         mmal  Mycobacterium marseillense
         mlp  Mycobacterium lepraemurium
         msa  Mycobacterium sp. JS623
         mul  Mycobacterium ulcerans
         mmc  Mycobacterium sp. MCS
         mkm  Mycobacterium sp. KMS
         mjl  Mycobacterium sp. JLS
         mmi  Mycobacterium marinum M
         mmae  Mycobacterium marinum E11
         mmm  Mycobacterium sp. MOTT36Y
         mli  Mycobacterium liflandii
         mkn  Mycobacterium kansasii ATCC 12478
         myv  Mycobacterium sp. VKM Ac-1817D
         mye  Mycobacterium sp. EPa45
         mhad  Mycobacterium haemophilum
         myn  Mycobacterium sp. NRRL B-3805
         mdx  Mycobacterium dioxanotrophicus
         mshg  Mycobacterium shigaense
         mfj  Mycobacterium florentinum
         mgro  Mycobacterium grossiae
         mxe  Mycobacterium xenopi
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       Mycolicibacterium (21)
         msm  Mycolicibacterium smegmatis MC2 155
         msg  Mycolicibacterium smegmatis MC2 155
         msb  Mycolicibacterium smegmatis MC2 155
         msn  Mycolicibacterium smegmatis INHR1
         msh  Mycolicibacterium smegmatis INHR2
         mva  Mycolicibacterium vanbaalenii
         mgi  Mycolicibacterium gilvum PYR-GCK
         msp  Mycolicibacterium gilvum Spyr1
         mcb  Mycolicibacterium chubuense
         mne  Mycolicibacterium neoaurum
         mgo  Mycolicibacterium goodii
         mft  Mycolicibacterium fortuitum
         mphl  Mycolicibacterium phlei
         mvq  Mycolicibacterium vaccae
         mll  Mycolicibacterium litorale
         mrh  Mycolicibacterium rhodesiae
         mthn  Mycolicibacterium thermoresistibile
         mhas  Mycolicibacterium hassiacum
         mdu  Mycolicibacterium duvalii
         mcht  Mycolicibacterium chitae
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       Mycobacteroides (9)
         mab  Mycobacteroides abscessus ATCC 19977
         mmv  Mycobacteroides abscessus subsp. massiliense GO 06
         mabb  Mycobacteroides abscessus subsp. bolletii 50594
         mabl  Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300
         mche  Mycobacteroides chelonae
         miz  Mycobacteroides immunogenum
         mste  Mycobacterium stephanolepidis
         msao  Mycobacteroides saopaulense
         msal  Mycobacteroides salmoniphilum
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       Mycolicibacter (3)
         mjd  Mycolicibacter sinensis
         mter  Mycolicibacter terrae
         mmin  Mycolicibacter minnesotensis
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       Hoyosella (1)
         asd  Hoyosella subflava
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       Mycolicibacillus (1)
         mkr  Mycolicibacillus koreensis
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       Corynebacterium (100)
         cgl  Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko)
         cgb  Corynebacterium glutamicum ATCC 13032 (Bielefeld)
         cgu  Corynebacterium glutamicum K051
         cgt  Corynebacterium glutamicum R
         cgs  Corynebacterium glutamicum SCgG1
         cgg  Corynebacterium glutamicum SCgG2
         cgm  Corynebacterium glutamicum MB001
         cgj  Corynebacterium glutamicum ATCC 21831
         cgq  Corynebacterium glutamicum AR1
         cgx  Corynebacterium glutamicum B253
         cef  Corynebacterium efficiens
         cdi  Corynebacterium diphtheriae NCTC 13129
         cdp  Corynebacterium diphtheriae 241
         cdh  Corynebacterium diphtheriae INCA 402
         cdt  Corynebacterium diphtheriae HC01
         cde  Corynebacterium diphtheriae HC02
         cdr  Corynebacterium diphtheriae HC03
         cda  Corynebacterium diphtheriae HC04
         cdz  Corynebacterium diphtheriae 31A
         cdb  Corynebacterium diphtheriae BH8
         cds  Corynebacterium diphtheriae C7 (beta)
         cdd  Corynebacterium diphtheriae CDCE 8392
         cdw  Corynebacterium diphtheriae PW8
         cdv  Corynebacterium diphtheriae VA01
         cdip  Corynebacterium diphtheriae NCTC11397
         cjk  Corynebacterium jeikeium
         cur  Corynebacterium urealyticum DSM 7109
         cua  Corynebacterium urealyticum DSM 7111
         car  Corynebacterium aurimucosum
         ckp  Corynebacterium kroppenstedtii
         cpl  Corynebacterium pseudotuberculosis 3/99-5
         cpg  Corynebacterium pseudotuberculosis 316
         cpp  Corynebacterium pseudotuberculosis P54B96
         cpk  Corynebacterium pseudotuberculosis 1002
         cpq  Corynebacterium pseudotuberculosis C231
         cpx  Corynebacterium pseudotuberculosis I19
         cpz  Corynebacterium pseudotuberculosis PAT10
         cor  Corynebacterium pseudotuberculosis 267
         cop  Corynebacterium pseudotuberculosis 31
         cod  Corynebacterium pseudotuberculosis 1/06-A
         cos  Corynebacterium pseudotuberculosis 42/02-A
         coi  Corynebacterium pseudotuberculosis CIP 52.97
         coe  Corynebacterium pseudotuberculosis 258
         cou  Corynebacterium pseudotuberculosis Cp162
         cpse  Corynebacterium pseudotuberculosis 48252
         cpsu  Corynebacterium pseudotuberculosis CS_10
         cpsf  Corynebacterium pseudotuberculosis Ft_2193/67
         crd  Corynebacterium resistens
         cul  Corynebacterium ulcerans BR-AD22
         cuc  Corynebacterium ulcerans 809
         cue  Corynebacterium ulcerans 0102
         cun  Corynebacterium ulcerans 210932
         cus  Corynebacterium ulcerans FRC11
         cuq  Corynebacterium ulcerans 210931
         cuz  Corynebacterium ulcerans 05146
         cuj  Corynebacterium ulcerans 131002
         cva  Corynebacterium variabile
         chn  Corynebacterium halotolerans
         ccn  Corynebacterium callunae
         cter  Corynebacterium terpenotabidum
         cmd  Corynebacterium maris
         caz  Corynebacterium argentoratense
         cfn  Corynebacterium falsenii
         ccg  Corynebacterium casei
         cvt  Corynebacterium vitaeruminis
         cgy  Corynebacterium glyciniphilum
         cax  Corynebacterium atypicum
         cii  Corynebacterium imitans
         cuv  Corynebacterium ureicelerivorans
         coa  Corynebacterium sp. ATCC 6931
         cdo  Corynebacterium doosanense
         chm  Corynebacterium humireducens
         csx  Corynebacterium singulare
         cmq  Corynebacterium marinum
         cku  Corynebacterium kutscheri
         ccj  Corynebacterium camporealensis
         cmv  Corynebacterium mustelae
         cei  Corynebacterium epidermidicanis
         cted  Corynebacterium testudinoris
         cut  Corynebacterium uterequi
         clw  Corynebacterium lactis
         cdx  Corynebacterium deserti
         csp  Corynebacterium simulans
         csta  Corynebacterium stationis
         ccjz  Corynebacterium crudilactis
         cfk  Corynebacterium frankenforstense
         cpho  Corynebacterium phocae
         cfc  Corynebacterium flavescens
         cgv  Corynebacterium glaucum
         cstr  Corynebacterium striatum
         caqu  Corynebacterium aquilae
         csph  Corynebacterium sphenisci
         camg  Corynebacterium ammoniagenes
         cmin  Corynebacterium minutissimum
         cpeg  Corynebacterium pelargi
         cxe  Corynebacterium xerosis
         cee  Corynebacterium endometrii
         csan  Corynebacterium sanguinis
         bfv  Brevibacterium flavum
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       Nocardia (10)
         nfa  Nocardia farcinica IFM 10152
         nfr  Nocardia farcinica NCTC11134
         ncy  Nocardia cyriacigeorgica
         nbr  Nocardia brasiliensis
         nno  Nocardia nova
         nsl  Nocardia mangyaensis
         nsr  Nocardia seriolae
         ntp  Nocardia terpenica
         noz  Nocardia sp. CS682
         nod  Nocardia otitidiscaviarum
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       Rhodococcus (21)
         rha  Rhodococcus jostii
         rer  Rhodococcus erythropolis PR4
         rey  Rhodococcus erythropolis CCM2595
         reb  Rhodococcus erythropolis BG43
         rop  Rhodococcus opacus B4
         roa  Rhodococcus opacus PD630
         req  Rhodococcus hoagii
         rpy  Rhodococcus pyridinivorans
         rhb  Rhodococcus sp. B7740
         rav  Rhodococcus aetherivorans
         rfa  Rhodococcus fascians
         rhw  Rhodococcus sp. WMMA185
         rhs  Rhodococcus sp. PBTS 2
         rrz  Rhodococcus ruber
         rhu  Rhodococcus sp. PBTS 1
         rqi  Rhodococcus qingshengii
         rhq  Rhodococcus sp. p52
         rhod  Rhodococcus sp. 008
         rrt  Rhodococcus rhodochrous
         rby  Rhodococcus biphenylivorans
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       Gordonia (11)
         gbr  Gordonia bronchialis
         gpo  Gordonia polyisoprenivorans
         gor  Gordonia sp. KTR9
         goq  Gordonia phthalatica
         gta  Gordonia terrae
         goc  Gordonia sp. YC-JH1
         git  Gordonia iterans
         gru  Gordonia rubripertincta
         gom  Gordonia insulae
         gav  Gordonia alkanivorans
         god  Gordonia sp. 135
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       Tsukamurella (2)
         tpr  Tsukamurella paurometabola
         tsm  Tsukamurella tyrosinosolvens
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       Segniliparus (1)
         srt  Segniliparus rotundus
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       Dietzia (5)
         dtm  Dietzia timorensis
         dit  Dietzia sp. oral taxon 368
         diz  Dietzia sp. JS16-p6b
         dpc  Dietzia psychralcaliphila
         dlu  Dietzia lutea
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       Lawsonella (1)
         cbq  Lawsonella clevelandensis
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       Tomitella (1)
         toy  Tomitella sp. HY188
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       Streptomyces (70)
         sco  Streptomyces coelicolor
         salb  Streptomyces albidoflavus
         sma  Streptomyces avermitilis
         sgr  Streptomyces griseus
         sgb  Streptomyces globisporus
         scb  Streptomyces scabiei
         ssx  Streptomyces sp. SirexAA-E
         svl  Streptomyces violaceusniger
         sct  Streptomyces cattleya NRRL 8057 = DSM 46488
         scy  Streptomyces cattleya NRRL 8057 = DSM 46488
         sfa  Streptomyces pratensis
         sbh  Streptomyces bingchenggensis
         shy  Streptomyces hygroscopicus subsp. jinggangensis 5008
         sho  Streptomyces hygroscopicus subsp. jinggangensis TL01
         sve  Streptomyces venezuelae
         sdv  Streptomyces davaonensis
         sals  Streptomyces albus DSM 41398
         strp  Streptomyces sp. PAMC 26508
         sfi  Streptomyces fulvissimus
         sci  Streptomyces collinus
         src  Streptomyces rapamycinicus
         salu  Streptomyces albulus NK660
         sall  Streptomyces albulus ZPM
         slv  Streptomyces lividans
         sgu  Streptomyces glaucescens
         svt  Streptomyces vietnamensis
         stre  Streptomyces sp. 769
         scw  Streptomyces cyaneogriseus
         sld  Streptomyces lydicus A02
         slc  Streptomyces lydicus 103
         sxi  Streptomyces xiamenensis
         strm  Streptomyces sp. Mg1
         strc  Streptomyces sp. CNQ-509
         samb  Streptomyces ambofaciens
         spri  Streptomyces pristinaespiralis
         scz  Streptomyces sp. CFMR 7
         scx  Streptomyces sp. CdTB01
         srw  Streptomyces reticuli
         strf  Streptomyces sp. 4F
         sle  Streptomyces leeuwenhoekii
         srn  Streptomyces rubrolavendulae
         spav  Streptomyces parvulus
         strt  Streptomyces sp. SAT1
         sclf  Streptomyces clavuligerus
         sgs  Streptomyces griseochromogenes
         stsi  Streptomyces qaidamensis
         sls  Streptomyces lincolnensis
         snr  Streptomyces noursei
         splu  Streptomyces pluripotens
         strd  Streptomyces sp. CCM_MD2014
         snw  Streptomyces niveus
         sauo  Streptomyces autolyticus
         ssia  Streptomyces alfalfae
         svu  Streptomyces violaceoruber
         spun  Streptomyces fodineus
         sgv  Streptomyces gilvosporeus
         smal  Streptomyces malaysiensis
         slau  Streptomyces laurentii
         salf  Streptomyces alboflavus
         salj  Streptomyces albireticuli
         slx  Streptomyces lavendulae subsp. lavendulae
         sfk  Streptomyces formicae
         snz  Streptomyces nigra
         sge  Streptomyces griseorubiginosus
         srj  Streptomyces rochei
         slk  Streptomyces lunaelactis
         sky  Streptomyces koyangensis
         sdx  Streptomyces dengpaensis
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       Kitasatospora (4)
         ksk  Kitasatospora setae
         kab  Kitasatospora albolonga
         kau  Kitasatospora aureofaciens
         kit  Kitasatospora sp. MMS16-BH015
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       Streptacidiphilus (1)
         stri  Streptacidiphilus sp. DSM 106435
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       Tropheryma (2)
         twh  Tropheryma whipplei Twist
         tws  Tropheryma whipplei TW08/27
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       Luteimicrobium (1)
         lxl  Luteimicrobium xylanilyticum
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       Leifsonia (3)
         lxx  Leifsonia xyli subsp. xyli CTCB07
         lxy  Leifsonia xyli subsp. cynodontis DSM 46306
         leif  Leifsonia sp. PS1209
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       Clavibacter (5)
         cmi  Clavibacter michiganensis subsp. michiganensis
         cms  Clavibacter michiganensis subsp. sepedonicus
         cmc  Clavibacter michiganensis subsp. nebraskensis
         cmh  Clavibacter michiganensis subsp. insidiosus
         ccap  Clavibacter michiganensis subsp. capsici
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       Microbacterium (18)
         mts  Microbacterium testaceum
         mim  Microbacterium sp. CGR1
         mio  Microbacterium sp. No. 7
         mip  Microbacterium sp. PAMC 28756
         mcw  Microbacterium chocolatum
         mpal  Microbacterium paludicola
         mih  Microbacterium sp. BH-3-3-3
         micr  Microbacterium sp. 1.5R
         maur  Microbacterium aurum
         mhos  Microbacterium hominis
         mfol  Microbacterium foliorum
         moo  Microbacterium oleivorans
         mlv  Microbacterium lemovicicum
         mwa  Microbacterium wangchenii
         mprt  Microbacterium protaetiae
         msed  Microbacterium sediminis
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       Rhodoluna (2)
         rla  Rhodoluna lacicola
         rpla  Candidatus Rhodoluna planktonica
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       Aquiluna (1)
         aqg  Aquiluna sp. 15G-AUS-rot
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       Rathayibacter (7)
         rtn  Rathayibacter tritici
         rry  Rathayibacter rathayi
         ria  Rathayibacter iranicus
         rfs  Rathayibacter festucae
         rte  Rathayibacter tanaceti
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       Curtobacterium (4)
         cum  Curtobacterium sp. MR_MD2014
         cub  Curtobacterium sp. BH-2-1-1
         cug  Curtobacterium sp. SGAir0471
         cqf  Curtobacterium flaccumfaciens
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       Microterricola (1)
         mvd  Microterricola viridarii
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       Frondihabitans (1)
       Agromyces (3)
         agm  Agromyces sp. MF30-A
         agf  Agromyces protaetiae
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       Cryobacterium (2)
         cart  Cryobacterium arcticum
         cry  Cryobacterium sp. LW097
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       Cnuibacter (1)
         cphy  Cnuibacter physcomitrellae
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       Aurantimicrobium (3)
         amin  Aurantimicrobium minutum
         aum  Aurantimicrobium sp. MWH-Mo1
         auw  Aurantimicrobium sp. MWH-Uga1
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       Pontimonas (1)
       Microcella (1)
         malk  Microcella alkaliphila
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       Mycetocola (1)
         myl  Mycetocola sp. 449
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       Salinibacterium (3)
         salc  Salinibacterium sp. CGMCC 1.16371
         sala  Salinibacterium sp. UTAS2018
         sald  Salinibacterium sp. dk2585
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       Humibacter (2)
         hum  Humibacter sp. BT305
         huw  Humibacter sp. WJ7-1
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       Gryllotalpicola (1)
         gry  Gryllotalpicola sp. 2DFW10M-5
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       Protaetiibacter (1)
         lyd  Protaetiibacter intestinalis
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       Lysinimonas (1)
         lyk  Lysinimonas sp. KACC 19322
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       Plantibacter (1)
         plap  Plantibacter sp. PA-3-X8
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       Leucobacter (3)
         leu  Leucobacter sp. DSM 101948
         ltr  Leucobacter triazinivorans
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       Agrococcus (1)
         agg  Agrococcus sp. SGAir0287
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       Marisediminicola (1)
         mant  Marisediminicola antarctica
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       Herbiconiux (1)
         hea  Herbiconiux sp. SALV-R1
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       Arthrobacter (18)
         art  Arthrobacter sp. FB24
         arr  Arthrobacter sp. Rue61a
         arm  Arthrobacter sp. PAMC 25486
         arl  Arthrobacter sp. LS16
         are  Arthrobacter sp. ERGS1:01
         aaq  Arthrobacter alpinus R3.8
         arw  Arthrobacter alpinus A3
         arh  Arthrobacter sp. Hiyo8
         ary  Arthrobacter sp. YC-RL1
         arz  Arthrobacter sp. ATCC 21022
         aru  Arthrobacter sp. U41
         arq  Arthrobacter sp. QXT-31
         arn  Arthrobacter sp. YN
         arx  Arthrobacter sp. ZXY-2
         acry  Arthrobacter crystallopoietes
         arth  Arthrobacter sp. PGP41
         artp  Arthrobacter sp. PAMC25564
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       Psychromicrobium (1)
       Paenarthrobacter (1)
         aau  Paenarthrobacter aurescens
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       Pseudarthrobacter (5)
         ach  Pseudarthrobacter chlorophenolicus
         apn  Pseudarthrobacter phenanthrenivorans
         psul  Pseudarthrobacter sulfonivorans
         psni  Pseudarthrobacter sp. NIBRBAC000502771
         psey  Pseudarthrobacter sp. YJ56
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       Glutamicibacter (4)
         aai  Glutamicibacter arilaitensis
         gar  Glutamicibacter halophytocola
         gcr  Glutamicibacter creatinolyticus
         glu  Glutamicibacter sp. ZJUTW
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       Renibacterium (1)
         rsa  Renibacterium salmoninarum
   4/45
       Kocuria (6)
         krh  Kocuria rhizophila
         kpl  Kocuria palustris
         kfv  Kocuria flava
         kii  Kocuria indica
         krs  Kocuria rosea
         kod  Kocuria sp. KD4
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       Micrococcus (2)
         mlu  Micrococcus luteus
         mick  Micrococcus sp. KBS0714
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       Rothia (3)
         rmu  Rothia mucilaginosa
         rdn  Rothia dentocariosa
         raj  Rothia aeria
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       Sinomonas (1)
         satk  Sinomonas atrocyanea
   4/45
       Neomicrococcus (1)
         nae  Neomicrococcus aestuarii
   4/45
       Auritidibacter (1)
         aul  Auritidibacter sp. NML130574
   4/45
       Citricoccus (1)
         cig  Citricoccus sp. SGAir0453
   4/45
       Beutenbergia (1)
         bcv  Beutenbergia cavernae
   4/45
       Brachybacterium (7)
         bfa  Brachybacterium faecium
         brx  Brachybacterium sp. P6-10-X1
         brv  Brachybacterium sp. VR2415
         bgg  Brachybacterium ginsengisoli
         brz  Brachybacterium sp. VM2412
         bsau  Brachybacterium saurashtrense
         brr  Brachybacterium sp. SGAir0954
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       Dermabacter (2)
         dva  Dermabacter vaginalis
         djj  Dermabacter jinjuensis
   4/45
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       Jonesia (1)
         jde  Jonesia denitrificans
   4/45
       Kytococcus (1)
         kse  Kytococcus sedentarius
   4/45
       Dermacoccus (2)
         dni  Dermacoccus nishinomiyaensis
         day  Dermacoccus abyssi
   4/45
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       Luteipulveratus (1)
         lmoi  Luteipulveratus mongoliensis
   4/45
       Xylanimonas (2)
         xce  Xylanimonas cellulosilytica
         xyl  Xylanimonas allomyrinae
   4/45
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       Isoptericola (2)
         iva  Isoptericola variabilis
         ido  Isoptericola dokdonensis
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       Cellulosimicrobium (2)
         cet  Cellulosimicrobium sp. TH-20
         cceu  Cellulosimicrobium cellulans
   4/45
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       Xylanimicrobium (1)
         xya  Xylanimicrobium sp. FW10M-9
   4/45
       Sanguibacter (2)
         ske  Sanguibacter keddieii
         sanw  Sanguibacter sp. HDW7
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       Cellulomonas (7)
         cfl  Cellulomonas flavigena
         cfi  Cellulomonas fimi
         cga  Cellulomonas gilvus
         cez  Cellulomonas sp. PSBB021
         celz  Cellulomonas shaoxiangyii
         celh  Cellulomonas sp. H30R-01
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       Oerskovia (1)
         oek  Oerskovia sp. KBS0722
   4/45
       Pseudactinotalea (1)
         psei  Pseudactinotalea sp. HY158
   4/45
       Intrasporangium (1)
         ica  Intrasporangium calvum
   4/45
       Arsenicicoccus (1)
         ars  Arsenicicoccus sp. oral taxon 190
   4/45
       Serinicoccus (2)
         serj  Serinicoccus hydrothermalis
         serw  Serinicoccus sp. W204
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       Janibacter (3)
         jte  Janibacter indicus
         jli  Janibacter limosus
         jme  Janibacter melonis
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       Ornithinimicrobium (2)
         orn  Ornithinimicrobium sp. AMA3305
         orz  Ornithinimicrobium sp. H23M54
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       Tetrasphaera (1)
         teh  Tetrasphaera sp. HKS02
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       Phycicoccus (1)
       Brevibacterium (4)
         blin  Brevibacterium aurantiacum
         bri  Brevibacterium sp. CS2
         blut  Brevibacterium luteolum
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       Dermatophilus (1)
         dco  Dermatophilus congolensis
   4/45
       Georgenia (1)
         gez  Georgenia sp. Z294
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       Cutibacterium (14)
         pac  Cutibacterium acnes KPA171202
         pak  Cutibacterium acnes SK137
         pav  Cutibacterium acnes TypeIA2 P.acn17
         pax  Cutibacterium acnes TypeIA2 P.acn31
         paz  Cutibacterium acnes TypeIA2 P.acn33
         paw  Cutibacterium acnes 266
         pad  Cutibacterium acnes subsp. defendens ATCC 11828
         pcn  Cutibacterium acnes 6609
         pacc  Cutibacterium acnes C1
         pach  Cutibacterium acnes HL096PA1
         pacn  Cutibacterium acnes hdn-1
         cacn  Cutibacterium acnes KCOM 1861 (= ChDC B594)
         pra  Cutibacterium avidum
         cgrn  Cutibacterium granulosum
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       Propionibacterium (5)
         pfr  Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
         pfre  Propionibacterium freudenreichii subsp. freudenreichii DSM 20271
         prl  Propionibacterium sp. oral taxon 193
         pacd  Propionibacterium acidifaciens
         paus  Propionibacterium australiense
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       Pseudopropionibacterium (1)
         ppc  Pseudopropionibacterium propionicum
   4/45
       Acidipropionibacterium (4)
         pbo  Acidipropionibacterium acidipropionici ATCC 4875
         aaci  Acidipropionibacterium acidipropionici CGMCC 1.2230
         acij  Acidipropionibacterium virtanenii
         aji  Acidipropionibacterium jensenii
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       Microlunatus (3)
         mph  Microlunatus phosphovorus
         mik  Microlunatus sp. KUDC0627
         micg  Microlunatus sp. Gsoil 973
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       Tessaracoccus (4)
         tfl  Tessaracoccus flavus
         tfa  Tessaracoccus flavescens
         tes  Tessaracoccus aquimaris
         tez  Tessaracoccus sp. T2.5-30
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       Raineyella (1)
         rain  Raineyella sp. CBA3103
   4/45
       Propioniciclava (1)
         prv  Propioniciclava sp. HDW11
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       Nocardioides (8)
         nca  Nocardioides sp. JS614
         ndk  Nocardioides dokdonensis
         noy  Nocardioides euryhalodurans
         noi  Nocardioides sp. dk3136
         noo  Nocardioides sp. S-1144
         ndp  Nocardioides daphniae
         nsn  Nocardioides seonyuensis
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       Kribbella (1)
         kfl  Kribbella flavida
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       Pimelobacter (1)
         psim  Pimelobacter simplex
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       Aeromicrobium (4)
         aer  Aeromicrobium erythreum
         aez  Aeromicrobium sp. 592
         aeb  Aeromicrobium sp. A1-2
         aef  Aeromicrobium sp. MF47
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       Micropruina (1)
         mgg  Micropruina glycogenica
   4/45
       Thermobifida (1)
         tfu  Thermobifida fusca
   4/45
       Nocardiopsis (3)
         nda  Nocardiopsis dassonvillei
         nal  Nocardiopsis alba
         ngv  Nocardiopsis gilva
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       Streptomonospora (1)
         strr  Streptomonospora sp. M2
   4/45
       Thermomonospora (1)
         tcu  Thermomonospora curvata
   4/45
       Actinomadura (1)
         actw  Actinomadura sp. WMMB499
   4/45
       Streptosporangium (1)
         sro  Streptosporangium roseum
   4/45
       Nonomuraea (2)
         noa  Nonomuraea sp. ATCC 55076
         now  Nonomuraea sp. WYY166
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       Frankia (5)
         fra  Frankia casuarinae
         fre  Frankia sp. EAN1pec
         fri  Frankia inefficax
         fsy  Candidatus Frankia datiscae
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       Acidothermus (1)
         ace  Acidothermus cellulolyticus
   4/45
       Nakamurella (2)
         nml  Nakamurella multipartita
         nak  Nakamurella sp. s14-144
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       Geodermatophilus (1)
         gob  Geodermatophilus obscurus
   4/45
       Blastococcus (1)
         bsd  Blastococcus saxobsidens
   4/45
       Modestobacter (1)
         mmar  Modestobacter marinus
   4/45
       Kineococcus (1)
         kra  Kineococcus radiotolerans
   4/45
       Saccharopolyspora (3)
         sen  Saccharopolyspora erythraea
         sace  Saccharopolyspora sp. E2A
         sacg  Saccharopolyspora sp. ASAGF58
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       Saccharomonospora (2)
         svi  Saccharomonospora viridis
         sacc  Saccharomonospora sp. 31sw
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       Amycolatopsis (11)
         amd  Amycolatopsis mediterranei U32
         amn  Amycolatopsis mediterranei S699
         amm  Amycolatopsis mediterranei S699
         amz  Amycolatopsis mediterranei RB
         aoi  Amycolatopsis keratiniphila
         aja  Amycolatopsis japonica
         amq  Amycolatopsis methanolica
         amyc  Amycolatopsis sp. AA4
         amyb  Amycolatopsis sp. BJA-103
         aab  Amycolatopsis albispora
         amyy  Amycolatopsis sp. YIM 10
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       Pseudonocardia (8)
         pdx  Pseudonocardia dioxanivorans
         psea  Pseudonocardia sp. AL041005-10
         psee  Pseudonocardia sp. EC080625-04
         pseh  Pseudonocardia sp. HH130629-09
         pseq  Pseudonocardia sp. EC080610-09
         pecq  Pseudonocardia sp EC080619-01
         phh  Pseudonocardia sp. HH130630-07
         paut  Pseudonocardia autotrophica
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       Actinosynnema (2)
         apre  Actinosynnema pretiosum
         ami  Actinosynnema mirum
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       Saccharothrix (2)
         sesp  Saccharothrix espanaensis
         ssyi  Saccharothrix syringae
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       Kutzneria (1)
         kal  Kutzneria albida
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       Kibdelosporangium (1)
         kphy  Kibdelosporangium phytohabitans
   4/45
       Lentzea (1)
         led  Lentzea guizhouensis
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       Actinoalloteichus (5)
         ahm  Actinoalloteichus hymeniacidonis
         acti  Actinoalloteichus sp. GBA129-24
         acad  Actinoalloteichus fjordicus
         ahg  Actinoalloteichus hoggarensis
         acta  Actinoalloteichus sp. AHMU CJ021
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       Alloactinosynnema (1)
         alo  Alloactinosynnema sp. L-07
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       Prauserella (1)
         pmad  Prauserella marina
   4/45
       Salinispora (2)
         stp  Salinispora tropica
         saq  Salinispora arenicola
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       Micromonospora (6)
         mau  Micromonospora aurantiaca
         mil  Micromonospora sp. L5
         micb  Micromonospora sp. B006
         mtua  Micromonospora tulbaghiae
         mich  Micromonospora sp. HM134
         mtem  Micromonospora terminaliae
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       Verrucosispora (1)
         vma  Verrucosispora maris
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       Actinoplanes (5)
         ase  Actinoplanes sp. SE50/110
         ams  Actinoplanes missouriensis
         actn  Actinoplanes sp. N902-109
         afs  Actinoplanes friuliensis
         acts  Actinoplanes sp. SE50
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       Plantactinospora (3)
         plk  Plantactinospora sp. KBS50
         plab  Plantactinospora sp. BC1
         plat  Plantactinospora sp. BB1
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       Phytohabitans (2)
         pfla  Phytohabitans flavus
         psuu  Phytohabitans suffuscus
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       Catenulispora (1)
         cai  Catenulispora acidiphila
   4/45
       Stackebrandtia (1)
         sna  Stackebrandtia nassauensis
   4/45
       Arcanobacterium (2)
       Mobiluncus (1)
         mcu  Mobiluncus curtisii
   4/45
       Trueperella (3)
         tpy  Trueperella pyogenes TP6375
         tpyo  Trueperella pyogenes TP8
         tbw  Trueperella bialowiezensis
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       Actinotignum (2)
         asg  Actinotignum schaalii
         actt  Actinobaculum sp. 313
   4/45
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       Schaalia (2)
         amy  Schaalia meyeri
         soo  Schaalia odontolytica
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       Actinomyces (11)
         acq  Actinomyces sp. oral taxon 414
         aos  Actinomyces oris
         ard  Actinomyces radicidentis
         actp  Actinomyces gaoshouyii
         actc  Actinomyces sp. Chiba101
         acto  Actinomyces sp. oral taxon 897
         ane  Actinomyces naeslundii
         ahw  Actinomyces howellii
         actz  Actinomyces sp. 432
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       Flaviflexus (2)
         fsl  Flaviflexus salsibiostraticola
         flh  Flaviflexus sp. H23T48
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       Bifidobacterium (56)
         bla  Bifidobacterium animalis subsp. lactis AD011
         blc  Bifidobacterium animalis subsp. lactis Bl-04
         blt  Bifidobacterium animalis subsp. lactis DSM 10140
         bbb  Bifidobacterium animalis subsp. lactis BB-12
         bbc  Bifidobacterium animalis subsp. lactis BLC1
         bnm  Bifidobacterium animalis subsp. lactis CNCM I-2494
         blv  Bifidobacterium animalis subsp. lactis V9
         blw  Bifidobacterium animalis subsp. lactis B420
         bls  Bifidobacterium animalis subsp. lactis Bi-07
         bani  Bifidobacterium animalis subsp. lactis Bl12
         banl  Bifidobacterium animalis subsp. lactis ATCC 27673
         bni  Bifidobacterium animalis subsp. animalis ATCC 25527
         banm  Bifidobacterium animalis RH
         bde  Bifidobacterium dentium Bd1
         bdn  Bifidobacterium dentium JCM 1195 = DSM 20436
         bast  Bifidobacterium asteroides
         btp  Bifidobacterium thermophilum
         bcor  Bifidobacterium coryneforme
         bpsp  Bifidobacterium pseudolongum
         bii  Bifidobacterium indicum
         bact  Bifidobacterium actinocoloniiforme
         bcho  Bifidobacterium choerinum
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       Gardnerella (3)
       Scardovia (1)
         sij  Scardovia inopinata
   4/45
       Parascardovia (1)
         pdo  Parascardovia denticolens
   4/45
       Thermobispora (1)
         tbi  Thermobispora bispora
   4/45
       Actinopolyspora (1)
         aey  Actinopolyspora erythraea
   4/45
       Planktophila (6)
         plan  Candidatus Planktophila lacus
         plak  Candidatus Planktophila dulcis
         plim  Candidatus Planktophila limnetica
         psuf  Candidatus Planktophila sulfonica
         pvs  Candidatus Planktophila versatilis
         pvn  Candidatus Planktophila vernalis
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       Nanopelagicus (3)
         abam  Candidatus Nanopelagicus limnes
         nhi  Candidatus Nanopelagicus hibericus
         nab  Candidatus Nanopelagicus abundans
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       Epidermidibacterium (1)
         eke  Epidermidibacterium keratini
   4/45
       Unclassified Actinobacteria (1)
       Rubrobacter (3)
         rub  Rubrobacter sp. SCSIO 52909
   4/45
       Baekduia (1)
       Conexibacter (1)
       Acidimicrobium (1)
       Ilumatobacter (1)
       Cryptobacterium (1)
       Slackia (1)
       Eggerthella (2)
       Gordonibacter (1)
       Adlercreutzia (1)
       Denitrobacterium (1)
       Atopobium (1)
       Olsenella (2)
       Parolsenella (1)
       Coriobacterium (1)
       Collinsella (1)
       Unclassified Coriobacteriaceae (1)
       Egibacter (1)
       Euzebya (1)
         euz  Euzebya sp. DY32-46
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     Cyanobacteria (128)
       Synechocystis (8)
         syn  Synechocystis sp. PCC 6803
         syz  Synechocystis sp. PCC 6803
         syy  Synechocystis sp. PCC 6803 GT-S
         syt  Synechocystis sp. PCC 6803 GT-I
         sys  Synechocystis sp. PCC 6803 PCC-N
         syq  Synechocystis sp. PCC 6803 PCC-P
         syj  Synechocystis sp. PCC 6714
         syo  Synechocystis sp. IPPAS B-1465
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       Synechococcus (23)
         cya  Synechococcus sp. JA-3-3Ab
         cyb  Synechococcus sp. JA-2-3B'a(2-13)
         syne  Synechococcus sp. PCC 6312
         synp  Synechococcus sp. PCC 7502
         slw  Synechococcus lividus
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       Thermosynechococcus (4)
         tel  Thermosynechococcus elongatus
         thn  Thermosynechococcus sp. NK55
         tvn  Thermosynechococcus vulcanus
         thec  Thermosynechococcus sp. CL-1
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       Cyanobium (2)
       Dactylococcopsis (1)
       Chamaesiphon (1)
         cmp  Chamaesiphon minutus
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       Leptolyngbya (4)
         len  Leptolyngbya sp. NIES-3755
         let  Leptolyngbya sp. O-77
         lbo  Leptolyngbya boryana
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       Halomicronema (1)
         hhg  Halomicronema hongdechloris
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       Pseudanabaena (2)
         pseu  Pseudanabaena sp. PCC 7367
         pser  Pseudanabaena sp. ABRG5-3
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       Prochlorococcus (14)
       Acaryochloris (1)
         amr  Acaryochloris marina
   5/45
       Thermoleptolyngbya (1)
         theu  Thermoleptolyngbya sp. PKUAC-SCTA183
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       Gloeocapsa (1)
         glp  Gloeocapsa sp. PCC 7428
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       Geminocystis (2)
       Chondrocystis (1)
       Microcystis (4)
         mar  Microcystis aeruginosa
         mpk  Microcystis panniformis
         miq  Microcystis sp. MC19
         mvz  Microcystis viridis
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       Cyanobacterium (3)
       Halothece (1)
       Euhalothece (1)
       Atelocyanobacterium (1)
       Crocosphaera (2)
         cyt  Crocosphaera subtropica
   5/45
       Rippkaea (2)
         cyp  Rippkaea orientalis PCC 8801
         cyh  Rippkaea orientalis PCC 8802
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       Gloeothece (2)
         cyc  Gloeothece citriformis
         cyj  Gloeothece verrucosa
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       Cyanothece (1)
         cyn  Cyanothece sp. PCC 7425
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       Trichodesmium (1)
         ter  Trichodesmium erythraeum
   5/45
       Microcoleus (1)
         mic  Microcoleus sp. PCC 7113
   5/45
       Arthrospira (1)
       Planktothrix (1)
         pagh  Planktothrix agardhii
   5/45
       Oxynema (1)
         oxy  Oxynema sp. AP17
   5/45
       Limnospira (1)
       Geitlerinema (1)
         gei  Geitlerinema sp. PCC 7407
   4/45
       Oscillatoria (2)
         oni  Oscillatoria nigro-viridis
   5/45
       Moorea (1)
         mpro  Moorea producens
   5/45
       Crinalium (1)
         cep  Crinalium epipsammum
   5/45
       Gloeobacter (2)
       Nostoc (8)
         ana  Nostoc sp. PCC 7120
         npu  Nostoc punctiforme
         nos  Nostoc sp. PCC 7107
         nop  Nostoc sp. PCC 7524
         non  Nostoc sp. NIES-3756
         nfl  Nostoc flagelliforme
         noe  Nostoc sp. CENA543
         nsh  Nostoc sphaeroides
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       Trichormus (2)
         ava  Trichormus variabilis
         naz  'Nostoc azollae' 0708
   4/45
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       Anabaena (4)
         anb  Anabaena sp. 90
         acy  Anabaena cylindrica
         awa  Anabaena sp. WA102
         ann  Anabaena sp. YBS01
   4/45
   5/45
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       Cylindrospermum (1)
         csg  Cylindrospermum stagnale
   5/45
       Calothrix (3)
         calo  Calothrix sp. PCC 7507
         calt  Calothrix sp. PCC 6303
         calh  Calothrix sp. 336/3
   5/45
   4/45
   5/45
       Rivularia (1)
         riv  Rivularia sp. PCC 7116
   5/45
       Fischerella (1)
         fis  Fischerella sp. NIES-3754
   4/45
       Nodularia (1)
         nsp  Nodularia spumigena
   4/45
       Dolichospermum (2)
         dou  Dolichospermum sp. UHCC 0315A
   4/45
       Tolypothrix (1)
         toq  Tolypothrix sp. PCC 7910
   4/45
       Unclassified Nostocales (1)
         ncn  Nostocales cyanobacterium HT-58-2
   4/45
       Chroococcidiopsis (1)
         cthe  Chroococcidiopsis thermalis
   4/45
       Pleurocapsa (1)
         plp  Pleurocapsa sp. PCC 7327
   4/45
       Stanieria (2)
       Unclassified Cyanobacteria (2)
       Unclassified Melainabacteria (1)
     Chloroflexi (31)
       Dehalococcoides (12)
       Dehalogenimonas (3)
         dly  Dehalogenimonas lykanthroporepellens
         dew  Dehalogenimonas sp. WBC-2
         dfo  Dehalogenimonas formicexedens
   4/45
   4/45
   4/45
       Roseiflexus (2)
       Chloroflexus (3)
       Herpetosiphon (1)
       Thermomicrobium (1)
       Sphaerobacterineae (1)
       Anaerolinea (1)
       Brevefilum (1)
       Pelolinea (1)
       Unclassified Anaerolineaceae (1)
       Caldilinea (1)
       Promineofilum (1)
         pbf  Candidatus Promineofilum breve
   4/45
       Unclassified Ktedonobacterales (1)
       Tepidiforma (1)
     Deinococcus-Thermus (33)
       Deinococcus (16)
       Truepera (1)
       Thermus (10)
       Meiothermus (4)
       Oceanithermus (1)
       Marinithermus (1)
 
 
 
 
 
 
     Other Terrabacteria group (3)
       Chthonomonas (1)
       Fimbriimonas (1)
       Thermobaculum (1)
         ttr  Thermobaculum terrenum
   5/45
     Chlamydiae (120)
       Chlamydia (114)
       Protochlamydia (2)
       Parachlamydia (1)
       Neochlamydia (1)
       Waddlia (1)
       Simkania (1)
 
 
 
 
 
 
     Verrucomicrobia (14)
       Opitutus (1)
       Lacunisphaera (1)
       Nibricoccus (1)
       Unclassified Opitutaceae (1)
       Coraliomargarita (1)
       Akkermansia (2)
       Roseimicrobium (1)
       Luteolibacter (1)
       Xiphinematobacter (1)
       Methylacidiphilum (2)
       Unclassified Verrucomicrobia (2)
 
 
 
 
 
 
 
 
 
 
 
     Planctomycetes (31)
       Rhodopirellula (1)
       Pirellula (2)
       Roseimaritima (1)
       Mariniblastus (1)
       Thermogutta (1)
         ttf  Thermogutta terrifontis
   4/45
       Lacipirellula (1)
       Planctopirus (2)
         plm  Planctopirus limnophila
         peh  Planctopirus ephydatiae
   4/45
   4/45
       Rubinisphaera (1)
         pbs  Rubinisphaera brasiliensis
   4/45
       Planctomyces (2)
         pls  Planctomyces sp. SH-PL14
         plh  Planctomyces sp. SH-PL62
   4/45
   4/45
       Fuerstia (1)
         fmr  Fuerstia marisgermanicae
   5/45
       Gimesia (2)
         gmr  Gimesia maris
         gim  Gimesia sp. E7
   5/45
   5/45
       Bremerella (1)
       Gemmata (3)
       Tuwongella (1)
       Limnoglobus (1)
       Isosphaera (1)
         ipa  Isosphaera pallida
   5/45
       Singulisphaera (1)
         saci  Singulisphaera acidiphila
   4/45
       Paludisphaera (1)
         pbor  Paludisphaera borealis
   4/45
       Aquisphaera (1)
         agv  Aquisphaera giovannonii
   5/45
       Kuenenia (1)
       Phycisphaera (1)
       Sedimentisphaera (2)
       Limihaloglobus (1)
       Anaerohalosphaera (1)
     Kiritimatiellaeota (1)
       Kiritimatiella (1)
 
     Lentisphaerae (1)
       Unclassified Victivallales (1)
 
     Spirochaetes (86)
       Borreliella (19)
       Borrelia (11)
       Treponema (23)
       Sediminispirochaeta (1)
       Spirochaeta (4)
         sta  Spirochaeta thermophila DSM 6192
         stq  Spirochaeta thermophila DSM 6578
   4/45
   4/45
       Sphaerochaeta (3)
       Salinispira (1)
       Oceanispirochaeta (1)
       Leptospira (13)
       Turneriella (1)
       Brachyspira (9)
     Acidobacteria (13)
       Koribacter (1)
         aba  Candidatus Koribacter versatilis
   5/45
       Acidobacterium (1)
         aca  Acidobacterium capsulatum
   4/45
       Granulicella (3)
         acm  Granulicella tundricola
         gma  Granulicella mallensis
         grw  Granulicella sp. WH15
   5/45
   4/45
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       Terriglobus (3)
         trs  Terriglobus roseus
   5/45
       Acidisarcina (1)
       Edaphobacter (1)
         eda  Edaphobacter sp. 12200R-103
   4/45
       Solibacter (1)
       Chloracidobacterium (1)
       Luteitalea (1)
     Elusimicrobia (4)
       Elusimicrobium (1)
       Endomicrobium (2)
       Termite group 1 (1)
 
 
 
     Fusobacteria (24)
       Fusobacterium (13)
       Ilyobacter (1)
       Leptotrichia (7)
       Sebaldella (1)
       Streptobacillus (1)
       Sneathia (1)
 
 
 
 
 
 
     Synergistetes (6)
       Thermanaerovibrio (1)
       Aminobacterium (1)
       Thermovirga (1)
       Anaerobaculum (1)
       Fretibacterium (1)
       Cloacibacillus (1)
 
 
 
 
 
 
     Fibrobacteres (2)
       Fibrobacter (2)
 
     Gemmatimonadetes (3)
       Gemmatimonas (2)
       Gemmatirosa (1)
 
 
     Bacteroidetes (359)
       Bacteroides (20)
       Porphyromonas (6)
       Fermentimonas (1)
       Petrimonas (2)
       Paludibacter (1)
       Parabacteroides (2)
       Tannerella (2)
       Muribaculum (1)
       Duncaniella (1)
       Barnesiella (1)
       Proteiniphilum (1)
       Dysgonomonas (1)
       Odoribacter (1)
       Butyricimonas (1)
       Azobacteroides (1)
       Prevotella (10)
       Alloprevotella (1)
       Alistipes (6)
       Mucinivorans (1)
       Unclassified Bacteroidales (1)
       Draconibacterium (2)
       Salinivirga (1)
       Alkalitalea (1)
       Labilibaculum (1)
       Salinibacter (2)
       Rhodothermus (2)
       Unclassified Rhodothermaceae (1)
       Chitinophaga (4)
       Niastella (1)
       Niabella (2)
       Flavisolibacter (2)
       Arachidicoccus (4)
       Filimonas (1)
       Pseudoflavitalea (1)
       Panacibacter (1)
       Pseudobacter (1)
       Flavihumibacter (1)
       Haliscomenobacter (1)
       Saprospira (1)
       Pedobacter (7)
       Pseudopedobacter (1)
       Sphingobacterium (9)
       Solitalea (1)
       Mucilaginibacter (8)
       Anseongella (1)
       Olivibacter (1)
       Unclassified Sphingobacteriaceae (1)
       Cyclobacterium (2)
       Belliella (1)
       Echinicola (3)
       Algoriphagus (1)
       Cytophaga (1)
       Dyadobacter (1)
       Spirosoma (6)
       Leadbetterella (1)
       Runella (3)
       Emticicia (1)
       Fibrella (2)
       Allopseudarcicella (1)
       Arcticibacterium (1)
       Rhodocytophaga (1)
       Flexibacter (1)
       Hymenobacter (10)
         hyd  Hymenobacter sp. DG25B
         hye  Hymenobacter sp. DG25A
         hyh  Hymenobacter oligotrophus
   4/45
   4/45
   4/45
       Pontibacter (2)
       Rufibacter (3)
       Nibribacter (1)
       Marivirga (1)
       Flammeovirga (2)
       Fabibacter (1)
       Unclassified Flammeovirgaceae (1)
       Amoebophilus (1)
       Cardinium (3)
       Chryseolinea (1)
       Gramella (4)
       Flavobacterium (25)
       Capnocytophaga (13)
       Robiginitalea (1)
       Zunongwangia (1)
       Croceibacter (1)
       Riemerella (6)
       Maribacter (5)
       Cellulophaga (5)
       Weeksella (1)
       Dokdonia (4)
       Lacinutrix (3)
       Zobellia (1)
       Muricauda (3)
       Aequorivita (2)
       Ornithobacterium (2)
       Psychroflexus (1)
       Nonlabens (5)
       Polaribacter (5)
       Elizabethkingia (9)
       Myroides (4)
       Chryseobacterium (15)
       Winogradskyella (2)
       Siansivirga (1)
       Algibacter (1)
       Sediminicola (1)
       Tenacibaculum (5)
       Lutibacter (1)
       Urechidicola (1)
       Wenyingzhuangia (1)
       Formosa (3)
       Salegentibacter (1)
       Seonamhaeicola (1)
       Arenibacter (1)
       Olleya (2)
       Flavivirga (1)
       Tamlana (1)
       Aureitalea (1)
       Spongiibacterium (1)
       Kordia (2)
       Mariniflexile (1)
       Aquimarina (3)
       Euzebyella (1)
       Cloacibacterium (1)
       Muriicola (1)
       Psychroserpens (1)
       Antarcticibacterium (2)
       Empedobacter (1)
       Oceanihabitans (1)
       Bergeyella (1)
       Marinirhabdus (1)
       Apibacter (1)
       Mesoflavibacter (1)
       Unclassified Flavobacteriaceae (3)
       Sulcia (9)
       Blattabacterium (9)
       Fluviicola (2)
       Owenweeksia (1)
       Ichthyobacterium (1)
       Walczuchella (1)
       Uzinura (1)
       Unclassified Bacteroidetes (1)
     Chlorobi (17)
       Chlorobaculum (3)
       Chlorobium (5)
       Pelodictyon (2)
       Prosthecochloris (4)
       Chloroherpeton (1)
       Ignavibacterium (1)
       Melioribacter (1)
 
 
 
 
 
 
 
     Balneolaeota (1)
       Cyclonatronum (1)
 
     Cloacimonetes (1)
       Cloacimonas (1)
 
     Aquificae (14)
       Aquifex (1)
       Hydrogenobaculum (3)
       Hydrogenobacter (2)
       Thermocrinis (2)
       Sulfurihydrogenibium (2)
       Persephonella (1)
       Thermosulfidibacter (1)
       Thermovibrio (1)
       Desulfurobacterium (1)
 
 
 
 
 
 
 
 
 
     Thermotogae (32)
       Thermotoga (13)
       Pseudothermotoga (3)
       Thermosipho (4)
       Fervidobacterium (3)
       Petrotoga (1)
       Marinitoga (2)
       Defluviitoga (1)
       Kosmotoga (2)
       Mesotoga (2)
       Athalassotoga (1)
 
 
 
 
 
 
 
 
 
 
     Coprothermobacterota (1)
       Coprothermobacter (1)
 
     Caldiserica (1)
       Caldisericum (1)
 
     Chrysiogenetes (1)
       Desulfurispirillum (1)
 
     Deferribacteres (5)
       Deferribacter (1)
       Denitrovibrio (1)
       Calditerrivibrio (1)
       Flexistipes (1)
       Geovibrio (1)
 
 
 
 
 
     Calditrichaeota (1)
       Caldithrix (1)
 
     Dictyoglomi (2)
       Dictyoglomus (2)
 
     Nitrospirae (9)
       Thermodesulfovibrio (1)
       Nitrospira (4)
       Leptospirillum (4)
 
 
 
     Thermodesulfobacteria (7)
       Thermodesulfatator (1)
       Thermodesulfobacterium (3)
       Caldimicrobium (1)
       Thermosulfuriphilus (1)
       Thermosulfurimonas (1)
 
 
 
 
 
     Saccharibacteria (4)
       Saccharimonas (4)
 
     Peregrinibacteria (1)
       Peribacter (1)
         prf  Candidatus Peribacter riflensis
   4/45
     Bipolaricaulota (2)
       Bipolaricaulis (2)
 
     Other (4)
       Vampirococcus (1)
       Methylomirabilis (1)
       Chazhemtobacterium (1)
       Babela (1)
 
 
 
 
     Unclassified Bacteria (11)
       tmg  Candidate division TM6 bacterium GW2011_GWF2_28_16
       mib  Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16
       wba  Candidatus Woesebacteria bacterium GW2011_GWF1_31_35
   4/45
   4/45
   4/45
 
   Archaea (325)
     Euryarchaeota (225)
       Methanocaldococcus (6)
       Methanotorris (1)
       Methanococcus (11)
       Methanothermococcus (1)
       Methanofervidicoccus (1)
       Methanothermobacter (8)
       Methanosphaera (2)
       Methanobrevibacter (6)
       Methanobacterium (10)
       Methanothermus (1)
       Methanopyrus (1)
       Archaeoglobus (5)
       Ferroglobus (1)
       Geoglobus (2)
       Thermoplasma (2)
       Picrophilus (1)
       Ferroplasma (2)
       Cuniculiplasma (1)
       Unclassified Thermoplasmatales (1)
       Methanomethylophilus (1)
       Methanomassiliicoccus (1)
       Methanoplasma (1)
       Unclassified Thermoplasmata (1)
       Aciduliprofundum (2)
       Pyrococcus (8)
       Thermococcus (27)
       Palaeococcus (1)
       Methanosarcina (23)
       Methanococcoides (2)
       Methanohalophilus (2)
       Methanohalobium (1)
       Methanosalsum (1)
       Methanolobus (2)
       Methanomethylovorans (1)
       Methanosaeta (3)
       Methanospirillum (1)
       Methanocorpusculum (1)
       Methanoculleus (3)
       Methanolacinia (1)
       Methanoregula (2)
       Methanosphaerula (1)
       Methanocella (3)
       Halobacterium (4)
       Halalkalicoccus (1)
       Halodesulfurarchaeum (2)
       Halanaeroarchaeum (2)
       Salarchaeum (1)
       Halarchaeum (1)
       Haloarcula (6)
       Natronomonas (2)
       Halorhabdus (3)
       Halomicrobium (3)
       Halorientalis (1)
       Halapricum (1)
       Unclassified Haloarculaceae (1)
       Haloquadratum (2)
       Haloferax (4)
       Halogeometricum (1)
       Haloplanus (4)
       Halobellus (1)
       Haloprofundus (1)
       Halorubrum (5)
       Salinigranum (1)
       Halohasta (1)
       Halolamina (1)
       Halalkaliarchaeum (1)
       Unclassified Haloferacales (1)
       Haloterrigena (3)
       Natrialba (1)
       Halopiger (1)
       Natrinema (4)
       Natronobacterium (1)
       Halovivax (1)
       Natronococcus (1)
       Salinarchaeum (1)
       Halostagnicola (1)
       Halobiforma (1)
       Natronolimnobius (3)
       Natronorubrum (2)
       Natrialbaceae (1)
       Unclassified Nanohaloarchaea (1)
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
     Crenarchaeota (71)
       Aeropyrum (2)
       Staphylothermus (2)
         smr  Staphylothermus marinus
         shc  Staphylothermus hellenicus
   4/45
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       Ignicoccus (2)
       Desulfurococcus (3)
         dka  Desulfurococcus amylolyticus 1221n
         dfd  Desulfurococcus amylolyticus DSM 16532
         dmu  Desulfurococcus mucosus
   4/45
   4/45
   4/45
       Thermosphaera (1)
         tag  Thermosphaera aggregans
   4/45
       Ignisphaera (1)
         iag  Ignisphaera aggregans
   4/45
       Thermogladius (1)
         thg  Thermogladius calderae
   4/45
       Hyperthermus (1)
       Pyrolobus (1)
       Pyrodictium (1)
       Sulfurisphaera (2)
       Saccharolobus (5)
       Sulfolobus (15)
       Metallosphaera (5)
       Acidianus (5)
       Sulfodiicoccus (1)
       Stygiolobus (1)
       Sulfuracidifex (1)
       Pyrobaculum (8)
         pyr  Pyrobaculum ferrireducens
   4/45
       Caldivirga (1)
       Thermoproteus (2)
       Vulcanisaeta (2)
       Thermofilum (4)
       Acidilobus (2)
         asc  Acidilobus saccharovorans
   4/45
       Caldisphaera (1)
         clg  Caldisphaera lagunensis
   4/45
       Fervidicoccus (1)
         ffo  Fervidicoccus fontis
   4/45
     Thaumarchaeota (18)
       Nitrosopumilus (6)
         niw  Candidatus Nitrosopumilus sp. SW
   4/45
       Nitrosomarinus (1)
       Cenarchaeum (1)
       Nitrososphaera (3)
       Nitrosocosmicus (2)
       Nitrosocaldus (1)
       Caldiarchaeum (1)
         csu  Candidatus Caldiarchaeum subterraneum
   4/45
       Nitrosopelagicus (1)
       Nitrosotenuis (1)
         tah  Candidatus Nitrosotenuis cloacae
   4/45
       Nitrosotalea (1)
     Korarchaeota (1)
       Korarchaeum (1)
 
     Bathyarchaeota (2)
       Unclassified Bathyarchaeota (2)
 
     Geothermarchaeota (1)
       Conexivisphaera (1)
 
     Nanoarchaeota (2)
       Nanoarchaeum (1)
       Nanopusillus (1)
 
 
     Micrarchaeota (1)
       Candidatus Mancarchaeum (1)
 
     Lokiarchaeota (2)
       Lokiarchaeum (1)
       Prometheoarchaeum (1)
 
 
     Unclassified Archaea (2)

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Last updated: July 8, 2020

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