 Eukaryotes (541)
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Animals (250)
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Vertebrates (146)
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 Mammals (66)
Birds (24)
Reptiles (12)
Amphibians (3)
Fishes (39)
Cartilaginous fishes (2)
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Arthropods (72)
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Insects (65)
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Nematodes (6)
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Flatworms (4)
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Plants (106)
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Eudicots (75)
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Mustard family (9)
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Monocots (14)
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Basal Magnoliophyta (1)
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Green algae (11)
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Red algae (3)
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Fungi (133)
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Ascomycetes (95)
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Saccharomycetes (32)
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Basidiomycetes (33)
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Microsporidians (5)
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Protists (52)
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Choanoflagellates (2)
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Amoebozoa (7)
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Dictyostelia (3)
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Alveolates (21)
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Apicomplexans (18)
Ciliates (2)
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Stramenopiles (8)
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Euglenozoa (9)
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Tetramitia (1)
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Metamonada (2)
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Trichomonads (1)
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Prokaryotes (6109)
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Bacteria (5783)
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Gammaproteobacteria - Enterobacteria (511)
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Escherichia (69)
Salmonella (54)
Shigella (13)
Enterobacter (31)
Cronobacter (11)
Klebsiella (42)
Citrobacter (15)
Gibbsiella (1)
Blochmannia (6)
Hamiltonella (1)
unclassified aphid symbionts (2)
unclassified mealybug symbionts (1)
Riesia (2)
Moranella (2)
Shimwellia (1)
Raoultella (6)
Cedecea (4)
Pluralibacter (3)
Kosakonia (5)
Kluyvera (2)
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Leclercia (6)
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Buttiauxella (2)
Tachikawaea (1)
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Mikella (1)
Purcelliella (1)
Metakosakonia (1)
Atlantibacter (1)
Izhakiella (1)
Yokenella (1)
Scandinavium (1)
unclassified Enterobacteriaceae (4)
Yersinia (46)
Serratia (24)
Chania (1)
Rahnella (4)
Fukatsuia (1)
Pectobacterium (13)
Sodalis (4)
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Providencia (9)
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Plesiomonas (1)
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Gammaproteobacteria - Others (842)
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Haemophilus (22)
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Glaesserella (5)
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Histophilus (2)
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Pasteurella (7)
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Basfia (2)
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Mannheimia (15)
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Actinobacillus (11)
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Aggregatibacter (9)
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Gallibacterium (1)
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Bibersteinia (4)
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Avibacterium (2)
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Rodentibacter (2)
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Otariodibacter (1)
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Frederiksenia (1)
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Bisgaardia (1)
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unclassified Pasteurellaceae (1)
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Xylella (9)
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Xanthomonas (38)
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Stenotrophomonas (11)
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Pseudoxanthomonas (3)
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Lysobacter (11)
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Luteimonas (3)
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Thermomonas (2)
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Pseudolysobacter (1)
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Frateuria (1)
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Rhodanobacter (2)
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rgl Rhodanobacter glycinis
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9/15
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Dyella (4)
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Dokdonella (1)
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Luteibacter (2)
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Ahniella (1)
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Aerosticca (1)
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Vibrio (53)
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vaf Vibrio alfacsensis
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6/15
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Aliivibrio (4)
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Photobacterium (3)
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Grimontia (1)
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Paraphotobacterium (1)
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Salinivibrio (3)
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Pseudomonas (115)
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pre Pseudomonas resinovorans
pput Pseudomonas putida H8234
ppun Pseudomonas putida NBRC 14164
pfo Pseudomonas fluorescens Pf0-1
pfe Pseudomonas fluorescens F113
pcg Pseudomonas corrugata
pvr Pseudomonas veronii
pba Pseudomonas brassicacearum subsp. brassicacearum NFM421
pbc Pseudomonas brassicacearum DF41
ppuu Pseudomonas sp. UW4
pkc Pseudomonas knackmussii
pfz Pseudomonas fragi
plq Psychrobacter sp. FME2
ppsy Pseudomonas versuta
pset Pseudomonas sp. TCU-HL1
psil Pseudomonas silesiensis
pke Pseudomonas kribbensis
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Azotobacter (4)
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acx Azotobacter chroococcum
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2/15
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Oblitimonas (1)
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Permianibacter (1)
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Psychrobacter (12)
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pali Psychrobacter alimentarius
psyp Psychrobacter sp. PAMC27889
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3/15
3/15
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Acinetobacter (47)
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Moraxella (8)
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unclassified Moraxellaceae (1)
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Shewanella (34)
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spl Shewanella pealeana
shl Shewanella halifaxensis
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10/15
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Idiomarina (5)
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Colwellia (7)
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colw Colwellia sp. PAMC 21821
cber Colwellia beringensis
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5/15
11/15
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Litorilituus (1)
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Thalassotalea (2)
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Pseudoalteromonas (23)
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pha Pseudoalteromonas haloplanktis
prr Pseudoalteromonas rubra
ptn Pseudoalteromonas translucida
png Pseudoalteromonas nigrifaciens
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7/15
3/15
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Marinobacter (12)
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Alteromonas (23)
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Glaciecola (2)
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Paraglaciecola (2)
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Lacimicrobium (1)
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Catenovulum (1)
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Saliniradius (1)
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Salinimonas (2)
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Hydrocarboniclastica (1)
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Psychromonas (2)
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Ferrimonas (2)
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Moritella (3)
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Cellvibrio (5)
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Saccharophagus (1)
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Teredinibacter (1)
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Simiduia (1)
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Spongiibacter (1)
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spoi Spongiibacter sp. IMCC21906
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2/15
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Zhongshania (1)
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zal Zhongshania aliphaticivorans
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12/15
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Oceanicoccus (1)
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osg Oceanicoccus sagamiensis
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5/15
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Microbulbifer (6)
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maga Microbulbifer agarilyticus
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4/15
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Halioglobus (2)
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hja Halioglobus japonicus
halc Halioglobus maricola
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11/15
13/15
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Kineobactrum (1)
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kim Kineobactrum sp. M2
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3/15
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Coxiella (8)
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Rickettsiella (1)
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Aquicella (2)
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asip Aquicella siphonis
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3/15
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Legionella (23)
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lcj Legionella cherrii
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3/15
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Tatlockia (1)
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Methylococcus (2)
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Methylomonas (5)
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mdh Methylomonas sp. DH-1
mko Methylomonas koyamae
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2/15
2/15
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Methylomicrobium (2)
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Methylovulum (1)
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mpsy Methylovulum psychrotolerans
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2/15
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Methylocaldum (1)
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Methylospira (1)
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Francisella (43)
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fcf Francisella cf. novicida Fx1
fph Francisella philomiragia subsp. philomiragia ATCC 25017
fpt Francisella philomiragia subsp. philomiragia ATCC 25015 O#319L
fpi Francisella philomiragia O#319-029
fpm Francisella philomiragia O#319-036
fpx Francisella philomiragia O#319-067
fpz Francisella philomiragia GA01-2794
fpj Francisella philomiragia GA01-2801
frt Francisella salina
frf Francisella sp. FSC1006
frx Francisella uliginis
fad Francisella adeliensis
fmi Francisella marina
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Allofrancisella (2)
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Hydrogenovibrio (3)
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Thiomicrospira (3)
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Methylophaga (2)
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Cycloclasticus (3)
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Piscirickettsia (1)
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Thiomicrorhabdus (1)
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Thioploca (1)
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Beggiatoa (1)
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Nitrosococcus (4)
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Allochromatium (1)
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Thiocystis (1)
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Thioflavicoccus (1)
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Marichromatium (1)
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Tenderia (1)
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Nitrosoglobus (1)
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Thiodictyon (1)
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Rheinheimera (1)
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Thermochromatium (1)
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Alkalilimnicola (1)
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Halorhodospira (2)
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Ectothiorhodospira (2)
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Thioalkalivibrio (5)
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Spiribacter (4)
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Acidihalobacter (1)
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Halothiobacillus (2)
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Wenzhouxiangella (1)
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Woeseia (1)
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Granulosicoccus (1)
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Guyparkeria (1)
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Thiohalobacter (1)
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Hahella (2)
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Chromohalobacter (1)
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Halomonas (18)
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haf Halomonas sp. SF2003
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2/15
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Portiera (9)
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Carsonella (7)
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Evansia (1)
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Zymobacter (1)
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Halotalea (1)
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Cobetia (1)
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cmai Cobetia marina
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2/15
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Kushneria (3)
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Pistricoccus (1)
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Alcanivorax (5)
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axe Alcanivorax xenomutans
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2/15
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Ketobacter (1)
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kak Ketobacter alkanivorans
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9/15
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Kangiella (4)
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Marinomonas (3)
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Thalassolituus (2)
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Oleispira (1)
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oai Oleispira antarctica
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3/15
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Marinobacterium (1)
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Bacterioplanes (1)
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bsan Bacterioplanes sanyensis
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3/15
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Neptunomonas (1)
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Nitrincola (1)
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nik Nitrincola sp. KXZD1103
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3/15
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Bermanella (1)
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Gynuella (1)
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Reinekea (1)
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Oleiphilus (1)
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Litoricola (1)
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Aeromonas (22)
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Tolumonas (1)
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Oceanimonas (1)
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Oceanisphaera (2)
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Zobellella (1)
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Dichelobacter (1)
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Cardiobacterium (1)
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Gilliamella (1)
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Frischella (1)
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Orbus (1)
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Steroidobacter (1)
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sdf Steroidobacter denitrificans
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7/15
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Solimonas (1)
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sok Solimonas sp. K1W22B-7
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12/15
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Sinimarinibacterium (1)
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sini Sinimarinibacterium sp. NLF-5-8
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12/15
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Immundisolibacter (1)
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gbi Immundisolibacter cernigliae
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3/15
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Sulfuricaulis (1)
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Sulfurifustis (1)
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Acidiferrobacter (1)
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Salinisphaera (1)
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Thiolapillus (1)
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Sedimenticola (1)
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Thioglobus (3)
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Pseudohongiella (1)
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Nardonella (1)
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Reidiella (1)
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Ruthia (1)
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Vesicomyosocius (1)
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unclassified Gammaproteobacteria (6)
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gpb Gamma proteobacterium HdN1
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9/15
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Betaproteobacteria (446)
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Neisseria (30)
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Snodgrassella (1)
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Kingella (1)
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Vitreoscilla (2)
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Eikenella (2)
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Simonsiella (1)
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unclassified Neisseriaceae (1)
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Chromobacterium (7)
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Iodobacter (1)
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Laribacter (1)
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Pseudogulbenkiania (1)
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Jeongeupia (1)
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Aquaspirillum (1)
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aql Aquaspirillum sp. LM1
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2/15
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Aquitalea (2)
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Deefgea (1)
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Ralstonia (13)
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rpj Ralstonia pickettii DTP0602
rin Ralstonia insidiosa
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4/15
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Cupriavidus (13)
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reh Cupriavidus necator H16
cnc Cupriavidus necator N-1
cuh Cupriavidus necator NH9
reu Cupriavidus pinatubonensis JMP134
cti Cupriavidus taiwanensis
cbw Cupriavidus basilensis
cgd Cupriavidus gilardii
ccup Cupriavidus sp. USMAHM13
cup Cupriavidus malaysiensis
cuu Cupriavidus sp. USMAA2-4
cox Cupriavidus oxalaticus
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Burkholderia (89)
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bmv Burkholderia mallei SAVP1
bml Burkholderia mallei NCTC 10229
bmn Burkholderia mallei NCTC 10247
bmal Burkholderia mallei 23344
bmae Burkholderia mallei 6
bmaq Burkholderia mallei BMQ
bmai Burkholderia mallei 2000031063
bmaf Burkholderia mallei FMH 23344
bmaz Burkholderia mallei NCTC 10247
bmab Burkholderia mallei 2002734299
bpm Burkholderia pseudomallei 1710b
bpl Burkholderia pseudomallei 1106a
bpd Burkholderia pseudomallei 668
bpse Burkholderia pseudomallei MSHR305
bpsm Burkholderia pseudomallei MSHR511
bpsu Burkholderia pseudomallei MSHR146
bpsd Burkholderia pseudomallei MSHR520
bpz Burkholderia pseudomallei 1026b
bpq Burkholderia pseudomallei BPC006
bpk Burkholderia pseudomallei NCTC 13179
bpsh Burkholderia pseudomallei HBPUB10134a
bpsa Burkholderia pseudomallei NAU35A-3
bpso Burkholderia pseudomallei A79A
but Burkholderia pseudomallei TSV202
buu Burkholderia sp. BDU6
bve Burkholderia vietnamiensis LMG 10929
bur Burkholderia lata
bcj Burkholderia cenocepacia J2315
bcen Burkholderia cenocepacia DDS 22E-1
bceo Burkholderia cenocepacia H111
bam Burkholderia ambifaria AMMD
bmul Burkholderia multivorans ATCC BAA-247
bct Burkholderia cepacia GG4
bced Burkholderia cepacia DDS 7H-2
bcep Burkholderia cepacia ATCC 25416
bpyr Burkholderia pyrrocinia
bcon Burkholderia contaminans
bdf Burkholderia diffusa
btei Burkholderia territorii
bpsl Burkholderia pseudomultivorans
bmec Burkholderia metallica
bstl Burkholderia stabilis
bug Burkholderia sp. CCGE1001
buq Burkholderia sp. HB1
bpla Burkholderia plantarii ATCC 43733
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8/15
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2/15
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Paraburkholderia (18)
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bxb Paraburkholderia xenovorans LB400
bph Paraburkholderia phymatum
bge Paraburkholderia sp. CCGE1002
bpx Paraburkholderia phenoliruptrix
bpy Paraburkholderia phytofirmans
bfn Paraburkholderia fungorum
pspw Paraburkholderia sprentiae
pter Paraburkholderia terrae
pgp Paraburkholderia graminis
pcaf Paraburkholderia caffeinilytica
pmeg Paraburkholderia megapolitana
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2/15
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12/15
2/15
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Mycetohabitans (1)
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Polynucleobacter (4)
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Pandoraea (14)
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pve Pandoraea vervacti
pox Pandoraea oxalativorans
pfib Pandoraea fibrosis
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9/15
2/15
3/15
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Paucimonas (1)
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Ephemeroptericola (1)
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Lautropia (1)
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Mycoavidus (1)
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Caballeronia (1)
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caba Caballeronia sp. SBC2
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11/15
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Limnobacter (1)
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Bordetella (24)
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bpar Bordetella parapertussis Bpp5
bpa Bordetella parapertussis 12822
bbh Bordetella bronchiseptica 253
bbr Bordetella bronchiseptica RB50
bbm Bordetella bronchiseptica MO149
bbx Bordetella bronchiseptica S798
bpdz Bordetella pseudohinzii
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2/15
2/15
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2/15
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Achromobacter (9)
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Taylorella (5)
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Pusillimonas (3)
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Advenella (2)
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aka Advenella kashmirensis
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2/15
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Castellaniella (1)
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Basilea (1)
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Alcaligenes (3)
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Paenalcaligenes (1)
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Orrella (1)
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Oligella (1)
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Pigmentiphaga (2)
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Kerstersia (1)
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Rhodoferax (6)
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Polaromonas (5)
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Acidovorax (11)
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Verminephrobacter (1)
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Delftia (4)
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Variovorax (6)
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Comamonas (5)
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ctt Comamonas thiooxydans
ctes Comamonas testosteroni TK102
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11/15
11/15
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Alicycliphilus (2)
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adk Alicycliphilus denitrificans K601
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2/15
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Ramlibacter (1)
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Symbiobacter (1)
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Ottowia (2)
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Limnohabitans (2)
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Hydrogenophaga (6)
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hyn Hydrogenophaga sp. BPS33
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4/15
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Diaphorobacter (2)
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dih Diaphorobacter sp. HDW4A
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11/15
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Simplicispira (1)
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Melaminivora (2)
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Serpentinomonas (2)
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Methylibium (2)
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mpt Methylibium petroleiphilum
metp Methylibium sp. Pch-M
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3/15
3/15
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Herminiimonas (1)
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Janthinobacterium (8)
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Herbaspirillum (6)
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Zinderia (1)
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Collimonas (3)
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Massilia (10)
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Oxalobacter (1)
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Undibacterium (2)
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Noviherbaspirillum (1)
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Duganella (1)
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Sutterella (2)
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Leptothrix (1)
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Thiomonas (2)
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Rubrivivax (2)
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Roseateles (1)
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Paucibacter (1)
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Mitsuaria (1)
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Rhizobacter (1)
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Aquabacterium (1)
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Sphaerotilus (1)
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Xylophilus (1)
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unclassified Burkholderiales (3)
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Nitrosomonas (7)
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Nitrosospira (2)
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Sulfuritalea (1)
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Methyloversatilis (1)
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Thiobacillus (1)
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Methylobacillus (1)
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Methylotenera (2)
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Methylovorus (2)
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Methylopumilus (2)
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Methylophilus (1)
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Sideroxydans (1)
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Gallionella (1)
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Sulfuricella (1)
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Sulfuriferula (3)
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Ferriphaselus (1)
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Nitrotoga (1)
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Aromatoleum (1)
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Azospira (1)
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Rugosibacter (1)
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Oryzomicrobium (1)
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unclassified Rhodocyclaceae (1)
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Dechloromonas (2)
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Azoarcus (9)
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azi Azoarcus sp. CIB
atw Azoarcus sp. SY39
azd Azoarcus sp. DN11
azr Azoarcus sp. DD4
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5/15
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9/15
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Thauera (5)
|
thu Thauera humireducens
thk Thauera sp. K11
|
11/15
6/15
|
unclassified Zoogloeaceae (1)
|
Ferrovum (1)
|
Accumulibacter (1)
|
Tremblaya (3)
|
Kinetoplastibacterium (8)
|
Profftella (1)
|
Nasuia (1)
|
Vidania (1)
|
unclassified Betaproteobacteria (3)
|
Epsilonproteobacteria (187)
|
Helicobacter (76)
Wolinella (1)
Sulfurimonas (5)
Sulfuricurvum (2)
Campylobacter (67)
Arcobacter (13)
Aliiarcobacter (2)
Halarcobacter (2)
Pseudoarcobacter (1)
unclassified Arcobacter (2)
Sulfurospirillum (7)
Hydrogenimonas (1)
Nitratifractor (1)
Nitratiruptor (1)
Sulfurovum (2)
Nautilia (2)
Caminibacter (1)
Cetia (1)
|
|
Deltaproteobacteria (90)
|
Geobacter (11)
|
gme Geobacter metallireducens
|
4/15
|
Geoalkalibacter (1)
|
Pelobacter (4)
|
Desulfuromonas (2)
|
Desulfovibrio (18)
|
Pseudodesulfovibrio (5)
|
Lawsonia (2)
|
Desulfomicrobium (2)
|
Desulfohalobium (1)
|
Desulfotalea (1)
|
Desulfurivibrio (1)
|
Desulfobulbus (2)
|
Desulfocapsa (1)
|
Desulfococcus (2)
|
Desulfatibacillum (1)
|
Desulfobacterium (1)
|
Desulfobacula (1)
|
Desulfosarcina (3)
|
Anaeromyxobacter (4)
|
ade Anaeromyxobacter dehalogenans 2CP-C
acp Anaeromyxobacter dehalogenans 2CP-1
ank Anaeromyxobacter sp. K
|
2/15
2/15
2/15
|
Myxococcus (3)
|
msd Myxococcus stipitatus
|
5/15
|
Corallococcus (3)
|
ccx Corallococcus coralloides
|
4/15
|
Stigmatella (1)
|
sur Stigmatella aurantiaca
|
3/15
|
Archangium (1)
|
Melittangium (1)
|
Cystobacter (1)
|
cfus Cystobacter fuscus
|
5/15
|
Vulgatibacter (1)
|
Sorangium (2)
|
scl Sorangium cellulosum So ce56
scu Sorangium cellulosum So0157-2
|
2/15
3/15
|
Chondromyces (1)
|
Sandaracinus (1)
|
samy Sandaracinus amylolyticus
|
2/15
|
Labilithrix (1)
|
Minicystis (1)
|
mrm Minicystis rosea
|
3/15
|
Haliangium (1)
|
Syntrophus (1)
|
Desulfobacca (1)
|
Desulfomonile (1)
|
Syntrophobacter (1)
|
Desulfoglaeba (1)
|
Desulfarculus (1)
|
Hippea (1)
|
Desulfurella (1)
|
Bradymonas (1)
|
Alphaproteobacteria (705)
|
Rickettsia (48)
|
Orientia (2)
|
Phycorickettsia (1)
|
Wolbachia (10)
|
Anaplasma (10)
|
Ehrlichia (14)
|
Neorickettsia (4)
|
Midichloria (1)
|
Fokinia (1)
|
unclassified Rickettsiales (2)
|
Paracaedibacter (1)
|
Paracaedimonas (1)
|
Nucleicultrix (1)
|
unclassified Holosporaceae (1)
|
Mesorhizobium (11)
|
meso Mesorhizobium sp. B7
|
2/15
|
Chelativorans (1)
|
Hoeflea (1)
|
Aminobacter (2)
|
Phyllobacterium (1)
|
Roseitalea (1)
|
Nitratireductor (1)
|
Oricola (1)
|
Parvibaculum (1)
|
pla Parvibaculum lavamentivorans
|
2/15
|
Pyruvatibacter (1)
|
unclassified Rhodobiaceae (1)
|
Sinorhizobium (15)
|
Ensifer (4)
|
Agrobacterium (10)
|
avi Agrobacterium vitis
|
2/15
|
Rhizobium (26)
|
Neorhizobium (4)
|
Liberibacter (7)
|
Shinella (1)
|
Georhizobium (1)
|
Brucella (44)
|
Ochrobactrum (4)
|
Bradyrhizobium (18)
|
bgq Bradyrhizobium guangdongense
bgz Bradyrhizobium guangzhouense
|
2/15
2/15
|
Rhodopseudomonas (7)
|
Nitrobacter (2)
|
Oligotropha (3)
|
Bosea (5)
|
Variibacter (1)
|
Bartonella (24)
|
Xanthobacter (1)
|
xau Xanthobacter autotrophicus
|
2/15
|
Azorhizobium (1)
|
Starkeya (1)
|
sno Starkeya novella
|
2/15
|
Labrys (1)
|
Ancylobacter (2)
|
Methylorubrum (6)
|
Methylobacterium (14)
|
mrd Methylobacterium radiotolerans
mtea Methylobacterium terrae
|
3/15
4/15
|
Microvirga (3)
|
miv Microvirga sp. 17 mud 1-3
|
3/15
|
Beijerinckia (1)
|
Methylocella (2)
|
Methylovirgula (1)
|
unclassified Beijerinckiaceae (1)
|
Chelatococcus (2)
|
Hyphomicrobium (4)
|
Rhodomicrobium (1)
|
Pelagibacterium (1)
|
Filomicrobium (2)
|
Devosia (3)
|
Blastochloris (2)
|
Rhodoplanes (1)
|
rhz Rhodoplanes sp. Z2-YC6860
|
5/15
|
Maritalea (1)
|
Youhaiella (1)
|
Methylocystis (5)
|
Methylosinus (1)
|
Pleomorphomonas (1)
|
Martelella (3)
|
Aureimonas (1)
|
Breoghania (1)
|
Hodgkinia (4)
|
Methyloceanibacter (1)
|
Tokpelaia (1)
|
thd Candidatus Tokpelaia hoelldoblerii
|
3/15
|
Pseudorhodoplanes (1)
|
Hartmannibacter (1)
|
Nordella (1)
|
Methyloligella (1)
|
metg Methyloligella sp. GL2
|
5/15
|
unclassified Rhizobiales (1)
|
rbm Rhizobiales bacterium NRL2
|
2/15
|
Caulobacter (8)
|
Phenylobacterium (2)
|
Brevundimonas (10)
|
Asticcacaulis (1)
|
aex Asticcacaulis excentricus
|
3/15
|
unclassified Caulobacteraceae (1)
|
Ruegeria (4)
|
Epibacterium (1)
|
Rhodobacter (7)
|
Jannaschia (1)
|
Roseobacter (3)
|
Paracoccus (13)
|
Dinoroseobacter (1)
|
Ketogulonicigenium (3)
|
Pseudovibrio (1)
|
Phaeobacter (6)
|
Octadecabacter (4)
|
oat Octadecabacter antarcticus
|
3/15
|
Leisingera (3)
|
Roseibacterium (1)
|
Planktomarina (1)
|
Celeribacter (4)
|
Marinovum (1)
|
Confluentimicrobium (1)
|
con Confluentimicrobium sp. EMB200-NS6
|
2/15
|
Rhodovulum (3)
|
Pannonibacter (1)
|
Halocynthiibacter (1)
|
Labrenzia (5)
|
Defluviimonas (1)
|
daa Defluviimonas alba
|
3/15
|
Yangia (2)
|
Sulfitobacter (6)
|
Donghicola (1)
|
Salipiger (1)
|
Tateyamaria (1)
|
Pelagibaca (1)
|
Thioclava (1)
|
Roseovarius (5)
|
Yoonia (1)
|
Antarctobacter (1)
|
Rhodobaca (1)
|
Sagittula (1)
|
Thalassococcus (1)
|
Gemmobacter (1)
|
Tabrizicola (1)
|
Silicimonas (1)
|
Sedimentitalea (1)
|
Haematobacter (1)
|
Boseongicola (1)
|
Pseudorhodobacter (1)
|
pseb Pseudorhodobacter sp. S12M18
|
3/15
|
Litoreibacter (1)
|
Oceanicola (1)
|
Maribius (1)
|
Roseivivax (1)
|
Paraoceanicella (1)
|
Stappia (1)
|
Pseudohalocynthiibacter (1)
|
Monaibacterium (1)
|
Mameliella (1)
|
Thalassobius (1)
|
tgl Thalassobius gelatinovorus
|
3/15
|
unclassified Rhodobacteraceae (4)
|
Maricaulis (1)
|
Hyphomonas (1)
|
hne Hyphomonas neptunium
|
2/15
|
Hirschia (1)
|
Glycocaulis (1)
|
Hyphomonadaceae (1)
|
Zymomonas (8)
|
Novosphingobium (10)
|
nar Novosphingobium aromaticivorans
npp Novosphingobium sp. PP1Y
npn Novosphingobium pentaromativorans
nre Novosphingobium resinovorum
nov Novosphingobium sp. P6W
not Novosphingobium sp. THN1
ntd Novosphingobium tardaugens
ngf Novosphingobium ginsenosidimutans
nog Novosphingobium sp. Gsoil 351
|
11/15
11/15
4/15
6/15
9/15
11/15
11/15
6/15
4/15
|
Sphingopyxis (12)
|
sphk Sphingopyxis fribergensis
smaz Sphingopyxis macrogoltabida 203
sgi Sphingopyxis granuli
sphq Sphingopyxis sp. QXT-31
|
6/15
3/15
2/15
4/15
|
Sphingomonas (18)
|
swi Sphingomonas wittichii
sphd Sphingomonas wittichii DC-6
sphm Sphingomonas sp. MM-1
sphi Sphingomonas hengshuiensis
ssan Sphingomonas sanxanigenens
span Sphingomonas panacis
skr Sphingomonas koreensis
spkc Sphingomonas sp. KC8
spha Sphingomonas sp. YZ-8
|
12/15
13/15
7/15
4/15
9/15
5/15
4/15
8/15
11/15
|
Sphingobium (16)
|
sjp Sphingobium japonicum
sch Sphingobium chlorophenolicum
syb Sphingobium sp. YBL2
sbd Sphingobium baderi
spmi Sphingobium sp. MI1205
sphb Sphingobium sp. EP60837
sphr Sphingobium sp. RAC03
sinb Sphingobium indicum
spht Sphingobium sp. TKS
shyd Sphingobium hydrophobicum
sya Sphingobium yanoikuyae
sclo Sphingobium cloacae
sufl Sphingobium fuliginis
|
5/15
3/15
7/15
2/15
7/15
8/15
5/15
4/15
3/15
5/15
3/15
4/15
3/15
|
Citromicrobium (1)
|
cij Citromicrobium sp. JL477
|
4/15
|
Sphingorhabdus (3)
|
sphg Sphingorhabdus sp. M41
sfla Sphingorhabdus sp. SMR4y
sphy Sphingorhabdus sp. YGSMI21
|
6/15
6/15
5/15
|
Blastomonas (2)
|
blas Blastomonas sp. RAC04
bfw Blastomonas fulva
|
4/15
4/15
|
Rhizorhabdus (1)
|
rdi Rhizorhabdus dicambivorans
|
7/15
|
Sphingosinicella (2)
|
smic Sphingosinicella microcystinivorans
|
5/15
|
Tardibacter (1)
|
sphj Tardibacter chloracetimidivorans
|
6/15
|
Sphingosinithalassobacter (1)
|
spzr Sphingosinithalassobacter sp. zrk23
|
2/15
|
Hankyongella (1)
|
Parasphingopyxis (1)
|
Erythrobacter (8)
|
elq Erythrobacter litoralis DSM 8509
erk Erythrobacter sp. KY5
erf Erythrobacter sp. THAF29
|
6/15
2/15
4/15
|
Altererythrobacter (7)
|
alh Altererythrobacter sp. BO-6
|
6/15
|
Croceicoccus (2)
|
cman Croceicoccus marinus
|
5/15
|
Porphyrobacter (4)
|
pns Porphyrobacter neustonensis
porl Porphyrobacter sp. LM 6
phz Porphyrobacter sp. HT-58-2
pot Porphyrobacter sp. YT40
|
3/15
5/15
12/15
4/15
|
Gluconobacter (5)
|
Granulobacter (4)
|
Acidiphilium (2)
|
Gluconacetobacter (2)
|
gdi Gluconacetobacter diazotrophicus PA1 5 (Brazil)
gdj Gluconacetobacter diazotrophicus PA1 5 (JGI)
|
3/15
3/15
|
Komagataeibacter (6)
|
kna Komagataeibacter nataicola
|
3/15
|
Acetobacter (19)
|
Asaia (1)
|
Kozakia (1)
|
Roseomonas (3)
|
Neoasaia (1)
|
Commensalibacter (2)
|
Stella (2)
|
shum Stella humosa
svc Stella vacuolata
|
5/15
4/15
|
Neokomagataea (2)
|
Swingsia (2)
|
Bombella (2)
|
Rhodospirillum (3)
|
rce Rhodospirillum centenum
|
3/15
|
Pararhodospirillum (1)
|
Magnetospirillum (5)
|
Azospirillum (10)
|
Tistrella (1)
|
Endolissoclinum (2)
|
Thalassospira (3)
|
txi Thalassospira xiamenensis
thac Thalassospira marina
|
3/15
3/15
|
Magnetospira (1)
|
Haematospirillum (1)
|
Nitrospirillum (1)
|
nao Nitrospirillum amazonense
|
3/15
|
Niveispirillum (1)
|
ncb Niveispirillum cyanobacteriorum
|
4/15
|
Ferrovibrio (1)
|
Hypericibacter (2)
|
Parvularcula (1)
|
Magnetococcus (1)
|
Pelagibacter (3)
|
unclassified Pelagibacteraceae (2)
|
Emcibacter (1)
|
Micavibrio (2)
|
Polymorphum (1)
|
Phreatobacter (2)
|
Puniceispirillum (1)
|
Oligoflexia (12)
|
Bdellovibrio (8)
Halobacteriovorax (2)
Bacteriovorax (1)
unclassified Silvanigrellales (1)
|
|
Other proteobacteria (10)
|
Acidithiobacillus (7)
Mariprofundus (2)
Hydrogenophilus (1)
|
|
Firmicutes - Bacilli (817)
|
Bacillus (140)
|
Oceanobacillus (3)
|
Geobacillus (18)
|
Parageobacillus (3)
|
Anoxybacillus (6)
|
Amphibacillus (1)
|
Lysinibacillus (8)
|
Halobacillus (3)
|
Terribacillus (1)
|
Virgibacillus (7)
|
Lentibacillus (1)
|
Fictibacillus (2)
|
Salimicrobium (1)
|
Aeribacillus (1)
|
Aquibacillus (1)
|
Psychrobacillus (2)
|
Pradoshia (1)
|
prd Pradoshia sp. D12
|
2/15
|
Gracilibacillus (1)
|
Salicibibacter (2)
|
Pontibacillus (1)
|
Sporolactobacillus (1)
|
unclassified Sporolactobacillaceae (1)
|
Staphylococcus (92)
|
Macrococcus (3)
|
Salinicoccus (1)
|
Auricoccucs (1)
|
Listeria (47)
|
Brochothrix (1)
|
Exiguobacterium (5)
|
Gemella (5)
|
Brevibacillus (5)
|
Paenibacillus (49)
|
Thermobacillus (1)
|
Aneurinibacillus (2)
|
Cohnella (2)
|
Saccharibacillus (1)
|
Alicyclobacillus (2)
|
Kyrpidia (2)
|
Tumebacillus (2)
|
Solibacillus (3)
|
Planococcus (11)
|
Jeotgalibacillus (1)
|
Kurthia (2)
|
Sporosarcina (6)
|
Rummeliibacillus (1)
|
Paenisporosarcina (2)
|
Planomicrobium (2)
|
Novibacillus (1)
|
Laceyella (1)
|
Thermoactinomyces (1)
|
Kroppenstedtia (2)
|
Lactococcus (19)
|
Streptococcus (149)
|
Lactobacillus (101)
|
lpar Lactobacillus parabuchneri
lzy Lactobacillus zymae
|
3/15
3/15
|
Pediococcus (6)
|
Enterococcus (23)
|
Melissococcus (2)
|
Tetragenococcus (4)
|
Vagococcus (5)
|
Oenococcus (3)
|
ooe Oenococcus oeni
oen Oenococcus sp. UCMA 16435
osi Oenococcus sicerae
|
3/15
3/15
3/15
|
Leuconostoc (13)
|
Weissella (11)
|
Aerococcus (7)
|
Abiotrophia (1)
|
unclassified Aerococcaceae (1)
|
Carnobacterium (6)
|
Marinilactibacillus (1)
|
Jeotgalibaca (5)
|
Dolosigranulum (1)
|
Firmicutes - Clostridia (231)
|
Clostridium (54)
|
Alkaliphilus (2)
|
Arthromitus (4)
|
Geosporobacter (1)
|
Hathewaya (1)
|
Caloramator (1)
|
Crassaminicella (1)
|
Caloranaerobacter (1)
|
Mageeibacillus (1)
|
Fastidiosipila (1)
|
Hungateiclostridium (4)
|
unclassified Hungateiclostridiaceae (1)
|
Ruminiclostridium (1)
|
Thermoclostridium (2)
|
Pseudoclostridium (1)
|
unclassified Ruminococcaceae (4)
|
Flavonifractor (1)
|
Ethanoligenens (1)
|
Ruminococcus (5)
|
Faecalibacterium (2)
|
Caproiciproducens (1)
|
Butyrivibrio (3)
|
Cellulosilyticum (2)
|
Roseburia (3)
|
Coprococcus (2)
|
Blautia (6)
|
Lachnoclostridium (3)
|
Lacrimispora (2)
|
Anaerostipes (2)
|
Herbinix (1)
|
Anaerotignum (1)
|
Lachnoanaerobaculum (1)
|
Anaerobutyricum (1)
|
Pseudobutyrivibrio (1)
|
Anaerocolumna (1)
|
Lachnospira (1)
|
Mediterraneibacter (1)
|
Enterocloster (1)
|
unclassified Lachnospiraceae (4)
|
Clostridioides (5)
|
Peptoclostridium (1)
|
Acetoanaerobium (1)
|
Filifactor (1)
|
Paeniclostridium (1)
|
Romboutsia (1)
|
Peptacetobacter (1)
|
unclassified Peptostreptococcaceae (1)
|
Symbiobacterium (1)
|
Syntrophomonas (1)
|
Syntrophothermus (1)
|
Syntrophocurvum (1)
|
Desulfitobacterium (5)
|
dsy Desulfitobacterium hafniense Y51
dhd Desulfitobacterium hafniense DCB-2
ddh Desulfitobacterium dehalogenans
|
2/15
2/15
2/15
|
Desulfotomaculum (4)
|
Desulfofarcimen (1)
|
Desulfofundulus (1)
|
Desulfallas (1)
|
Pelotomaculum (1)
|
Desulforudis (1)
|
Thermincola (1)
|
Syntrophobotulus (1)
|
Desulfosporosinus (3)
|
Dehalobacter (3)
|
Heliobacterium (1)
|
Heliorestis (1)
|
Eubacterium (3)
|
Acetobacterium (1)
|
Oscillibacter (1)
|
Dysosmobacter (1)
|
Thermaerobacter (3)
|
Sulfobacillus (3)
|
Carboxydocella (1)
|
Christensenella (1)
|
Intestinimonas (1)
|
Mogibacterium (1)
|
Aminipila (3)
|
unclassified Clostridiales (4)
|
Caldanaerobacter (1)
|
Thermoanaerobacter (8)
|
Carboxydothermus (1)
|
Tepidanaerobacter (2)
|
Moorella (3)
|
Ammonifex (1)
|
Thermacetogenium (1)
|
Caldicellulosiruptor (9)
|
Thermosediminibacter (1)
|
Thermoanaerobacterium (4)
|
Thermodesulfobium (2)
|
Mahella (1)
|
Natranaerobius (1)
|
Halothermothrix (1)
|
Halanaerobium (2)
|
Halocella (1)
|
Acetohalobium (1)
|
Halobacteroides (1)
|
Anoxybacter (1)
|
Firmicutes - Others (46)
|
Finegoldia (1)
Anaerococcus (1)
Parvimonas (1)
Peptoniphilus (3)
Gottschalkia (1)
Sporanaerobacter (1)
Veillonella (4)
Megasphaera (3)
Dialister (2)
Selenomonas (5)
Megamonas (2)
Pelosinus (2)
Methylomusa (1)
Sporomusa (1)
Acidaminococcus (2)
Phascolarctobacterium (1)
Erysipelothrix (5)
Faecalitalea (1)
Turicibacter (2)
Faecalibaculum (1)
Absiella (2)
Erysipelatoclostridium (1)
unclassified Erysipelotrichaceae (2)
Limnochorda (1)
|
|
Tenericutes (160)
|
Mycoplasma (99)
Ureaplasma (4)
Hepatoplasma (1)
Phytoplasma (8)
Acholeplasma (6)
Mesoplasma (8)
Entomoplasma (4)
Spiroplasma (27)
Izimaplasma (1)
unclassified Tenericutes (2)
|
|
Actinobacteria (752)
|
Mycobacterium (73)
|
mtu Mycobacterium tuberculosis H37Rv
mtv Mycobacterium tuberculosis H37Rv
mtc Mycobacterium tuberculosis CDC1551
mra Mycobacterium tuberculosis H37Ra
mtf Mycobacterium tuberculosis F11
mtb Mycobacterium tuberculosis KZN 1435
mtk Mycobacterium tuberculosis KZN 4207
mtz Mycobacterium tuberculosis KZN 605
mtg Mycobacterium tuberculosis RGTB327
mti Mycobacterium tuberculosis RGTB423
mte Mycobacterium tuberculosis CCDC5079
mtur Mycobacterium tuberculosis CCDC5079
mtl Mycobacterium tuberculosis CCDC5180
mto Mycobacterium tuberculosis CTRI-2
mtd Mycobacterium tuberculosis UT205
mtn Mycobacterium tuberculosis Erdman = ATCC 35801
mtj Mycobacterium tuberculosis Beijing/NITR203
mtub Mycobacterium tuberculosis 7199-99
mtuc Mycobacterium tuberculosis CAS/NITR204
mtue Mycobacterium tuberculosis EAI5/NITR206
mtx Mycobacterium tuberculosis EAI5
mtuh Mycobacterium tuberculosis Haarlem/NITR202
mtul Mycobacterium tuberculosis Haarlem
mtut Mycobacterium tuberculosis BT1
mtuu Mycobacterium tuberculosis BT2
mtq Mycobacterium tuberculosis HKBS1
mbo Mycobacterium tuberculosis variant bovis AF2122/97
mbb Mycobacterium tuberculosis variant bovis BCG Pasteur 1173P2
mbt Mycobacterium tuberculosis variant bovis BCG Tokyo 172
mbm Mycobacterium tuberculosis variant bovis BCG Mexico
mbk Mycobacterium tuberculosis variant bovis BCG Korea 1168P
mbx Mycobacterium tuberculosis variant bovis BCG ATCC 35743
maf Mycobacterium tuberculosis variant africanum
mmic Mycobacterium tuberculosis variant microti
mce Mycobacterium canettii CIPT 140010059
mcq Mycobacterium canettii CIPT 140060008
mcv Mycobacterium canettii CIPT 140070008
mcx Mycobacterium canettii CIPT 140070010
mcz Mycobacterium canettii CIPT 140070017
mle Mycobacterium leprae TN
mlb Mycobacterium leprae Br4923
mpa Mycobacterium avium subsp. paratuberculosis K-10
mao Mycobacterium avium subsp. paratuberculosis MAP4
mavi Mycobacterium avium subsp. paratuberculosis E1
mavu Mycobacterium avium subsp. paratuberculosis E93
mav Mycobacterium avium 104
mit Mycobacterium intracellulare MOTT-02
mia Mycobacterium intracellulare ATCC 13950
mid Mycobacterium intracellulare subsp. intracellulare
myo Mycobacterium intracellulare subsp. yongonense
mir Mycobacterium paraintracellulare
mchi Mycobacterium chimaera
mmal Mycobacterium marseillense
mlp Mycobacterium lepraemurium
msa Mycobacterium sp. JS623
mul Mycobacterium ulcerans
mmc Mycobacterium sp. MCS
mkm Mycobacterium sp. KMS
mjl Mycobacterium sp. JLS
mmi Mycobacterium marinum M
mmae Mycobacterium marinum E11
mmm Mycobacterium sp. MOTT36Y
mli Mycobacterium liflandii
mkn Mycobacterium kansasii ATCC 12478
myv Mycobacterium sp. VKM Ac-1817D
mye Mycobacterium sp. EPa45
mhad Mycobacterium haemophilum
myn Mycobacterium sp. NRRL B-3805
mdx Mycobacterium dioxanotrophicus
mshg Mycobacterium shigaense
mfj Mycobacterium florentinum
mgro Mycobacterium grossiae
mxe Mycobacterium xenopi
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Mycolicibacterium (21)
|
msm Mycolicibacterium smegmatis MC2 155
msg Mycolicibacterium smegmatis MC2 155
msb Mycolicibacterium smegmatis MC2 155
msn Mycolicibacterium smegmatis INHR1
msh Mycolicibacterium smegmatis INHR2
mva Mycolicibacterium vanbaalenii
mgi Mycolicibacterium gilvum PYR-GCK
msp Mycolicibacterium gilvum Spyr1
mcb Mycolicibacterium chubuense
mne Mycolicibacterium neoaurum
mgo Mycolicibacterium goodii
mft Mycolicibacterium fortuitum
mphl Mycolicibacterium phlei
mvq Mycolicibacterium vaccae
mll Mycolicibacterium litorale
mrh Mycolicibacterium rhodesiae
mthn Mycolicibacterium thermoresistibile
mhas Mycolicibacterium hassiacum
mdu Mycolicibacterium duvalii
mcht Mycolicibacterium chitae
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|
Mycobacteroides (9)
|
mab Mycobacteroides abscessus ATCC 19977
mmv Mycobacteroides abscessus subsp. massiliense GO 06
mabb Mycobacteroides abscessus subsp. bolletii 50594
mabl Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300
mche Mycobacteroides chelonae
miz Mycobacteroides immunogenum
mste Mycobacterium stephanolepidis
msao Mycobacteroides saopaulense
msal Mycobacteroides salmoniphilum
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Mycolicibacter (3)
|
mjd Mycolicibacter sinensis
mter Mycolicibacter terrae
mmin Mycolicibacter minnesotensis
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12/15
11/15
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Hoyosella (1)
|
asd Hoyosella subflava
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9/15
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Mycolicibacillus (1)
|
mkr Mycolicibacillus koreensis
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11/15
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Corynebacterium (100)
|
cgy Corynebacterium glyciniphilum
coa Corynebacterium sp. ATCC 6931
clw Corynebacterium lactis
cxe Corynebacterium xerosis
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2/15
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Nocardia (10)
|
nfa Nocardia farcinica IFM 10152
nfr Nocardia farcinica NCTC11134
ncy Nocardia cyriacigeorgica
nbr Nocardia brasiliensis
nno Nocardia nova
nsl Nocardia mangyaensis
nsr Nocardia seriolae
ntp Nocardia terpenica
noz Nocardia sp. CS682
nod Nocardia otitidiscaviarum
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|
Rhodococcus (21)
|
rha Rhodococcus jostii
rer Rhodococcus erythropolis PR4
rey Rhodococcus erythropolis CCM2595
reb Rhodococcus erythropolis BG43
rop Rhodococcus opacus B4
roa Rhodococcus opacus PD630
req Rhodococcus hoagii
rpy Rhodococcus pyridinivorans
rhb Rhodococcus sp. B7740
rav Rhodococcus aetherivorans
rfa Rhodococcus fascians
rhw Rhodococcus sp. WMMA185
rhs Rhodococcus sp. PBTS 2
rrz Rhodococcus ruber
rhu Rhodococcus sp. PBTS 1
rqi Rhodococcus qingshengii
rhq Rhodococcus sp. p52
rhod Rhodococcus sp. 008
rrt Rhodococcus rhodochrous
rby Rhodococcus biphenylivorans
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Gordonia (11)
|
gbr Gordonia bronchialis
gpo Gordonia polyisoprenivorans
gor Gordonia sp. KTR9
goq Gordonia phthalatica
gta Gordonia terrae
goc Gordonia sp. YC-JH1
git Gordonia iterans
gru Gordonia rubripertincta
gom Gordonia insulae
gav Gordonia alkanivorans
god Gordonia sp. 135
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Tsukamurella (2)
|
tpr Tsukamurella paurometabola
tsm Tsukamurella tyrosinosolvens
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10/15
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Segniliparus (1)
|
srt Segniliparus rotundus
|
3/15
|
Dietzia (5)
|
dtm Dietzia timorensis
dit Dietzia sp. oral taxon 368
diz Dietzia sp. JS16-p6b
dpc Dietzia psychralcaliphila
dlu Dietzia lutea
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10/15
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Lawsonella (1)
|
cbq Lawsonella clevelandensis
|
2/15
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Tomitella (1)
|
toy Tomitella sp. HY188
|
10/15
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Streptomyces (71)
|
sma Streptomyces avermitilis
sgr Streptomyces griseus
sgb Streptomyces globisporus
scb Streptomyces scabiei
ssx Streptomyces sp. SirexAA-E
svl Streptomyces violaceusniger
sct Streptomyces cattleya NRRL 8057 = DSM 46488
scy Streptomyces cattleya NRRL 8057 = DSM 46488
sbh Streptomyces bingchenggensis
shy Streptomyces hygroscopicus subsp. jinggangensis 5008
sho Streptomyces hygroscopicus subsp. jinggangensis TL01
sve Streptomyces venezuelae
sdv Streptomyces davaonensis
sals Streptomyces albus DSM 41398
sfi Streptomyces fulvissimus
sci Streptomyces collinus
src Streptomyces rapamycinicus
salu Streptomyces albulus NK660
sall Streptomyces albulus ZPM
sgu Streptomyces glaucescens
svt Streptomyces vietnamensis
stre Streptomyces sp. 769
scw Streptomyces cyaneogriseus
sld Streptomyces lydicus A02
slc Streptomyces lydicus 103
strm Streptomyces sp. Mg1
strc Streptomyces sp. CNQ-509
spri Streptomyces pristinaespiralis
scz Streptomyces sp. CFMR 7
scx Streptomyces sp. CdTB01
srw Streptomyces reticuli
strf Streptomyces sp. 4F
sle Streptomyces leeuwenhoekii
strt Streptomyces sp. SAT1
sclf Streptomyces clavuligerus
sgs Streptomyces griseochromogenes
stsi Streptomyces qaidamensis
sls Streptomyces lincolnensis
snr Streptomyces noursei
splu Streptomyces pluripotens
strd Streptomyces sp. CCM_MD2014
snw Streptomyces niveus
sauo Streptomyces autolyticus
ssia Streptomyces alfalfae
svu Streptomyces violaceoruber
spun Streptomyces fodineus
sgv Streptomyces gilvosporeus
smal Streptomyces malaysiensis
slau Streptomyces laurentii
salf Streptomyces alboflavus
salj Streptomyces albireticuli
slx Streptomyces lavendulae subsp. lavendulae
stro Streptomyces sp. MOE7
sfk Streptomyces formicae
snz Streptomyces nigra
sge Streptomyces griseorubiginosus
srj Streptomyces rochei
slk Streptomyces lunaelactis
sdx Streptomyces dengpaensis
sgd Streptomyces griseoviridis
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Kitasatospora (4)
|
kab Kitasatospora albolonga
kau Kitasatospora aureofaciens
kit Kitasatospora sp. MMS16-BH015
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Streptacidiphilus (1)
|
stri Streptacidiphilus sp. DSM 106435
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2/15
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Tropheryma (2)
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Luteimicrobium (1)
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Leifsonia (3)
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Clavibacter (5)
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Microbacterium (18)
|
Rhodoluna (2)
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Aquiluna (1)
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Rathayibacter (7)
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Curtobacterium (4)
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Microterricola (1)
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Frondihabitans (1)
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Agromyces (3)
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Cryobacterium (2)
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Cnuibacter (1)
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Aurantimicrobium (3)
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Pontimonas (1)
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Microcella (1)
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Mycetocola (1)
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Salinibacterium (3)
|
sald Salinibacterium sp. dk2585
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2/15
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Humibacter (2)
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Gryllotalpicola (1)
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Protaetiibacter (1)
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Lysinimonas (1)
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Plantibacter (1)
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Leucobacter (3)
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Agrococcus (1)
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Marisediminicola (1)
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Herbiconiux (1)
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Arthrobacter (18)
|
arl Arthrobacter sp. LS16
ary Arthrobacter sp. YC-RL1
arq Arthrobacter sp. QXT-31
arn Arthrobacter sp. YN
acry Arthrobacter crystallopoietes
artp Arthrobacter sp. PAMC25564
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Psychromicrobium (1)
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Paenarthrobacter (1)
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Pseudarthrobacter (5)
|
psul Pseudarthrobacter sulfonivorans
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4/15
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Glutamicibacter (4)
|
glu Glutamicibacter sp. ZJUTW
|
2/15
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Renibacterium (1)
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Kocuria (6)
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Micrococcus (2)
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Rothia (3)
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Sinomonas (1)
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Neomicrococcus (1)
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Auritidibacter (1)
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Citricoccus (1)
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Beutenbergia (1)
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Brachybacterium (7)
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Dermabacter (2)
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Jonesia (1)
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Kytococcus (1)
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Dermacoccus (2)
|
day Dermacoccus abyssi
|
2/15
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Luteipulveratus (1)
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lmoi Luteipulveratus mongoliensis
|
2/15
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Xylanimonas (2)
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Isoptericola (2)
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Cellulosimicrobium (2)
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Xylanimicrobium (1)
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Sanguibacter (2)
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Cellulomonas (7)
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Oerskovia (1)
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oek Oerskovia sp. KBS0722
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2/15
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Pseudactinotalea (1)
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Intrasporangium (1)
|
ica Intrasporangium calvum
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2/15
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Arsenicicoccus (1)
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Serinicoccus (2)
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Janibacter (3)
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jte Janibacter indicus
jli Janibacter limosus
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Ornithinimicrobium (2)
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Tetrasphaera (1)
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teh Tetrasphaera sp. HKS02
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2/15
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Phycicoccus (1)
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Brevibacterium (4)
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Dermatophilus (1)
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Georgenia (1)
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Cutibacterium (14)
|
Propionibacterium (5)
|
Pseudopropionibacterium (1)
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Acidipropionibacterium (4)
|
pbo Acidipropionibacterium acidipropionici ATCC 4875
aaci Acidipropionibacterium acidipropionici CGMCC 1.2230
acij Acidipropionibacterium virtanenii
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Microlunatus (3)
|
mph Microlunatus phosphovorus
|
2/15
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Tessaracoccus (4)
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Raineyella (1)
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Propioniciclava (1)
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Nocardioides (8)
|
nca Nocardioides sp. JS614
ndk Nocardioides dokdonensis
noy Nocardioides euryhalodurans
noo Nocardioides sp. S-1144
ndp Nocardioides daphniae
nbe Nocardioides baekrokdamisoli
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Kribbella (1)
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Pimelobacter (1)
|
psim Pimelobacter simplex
|
10/15
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Aeromicrobium (4)
|
aeb Aeromicrobium sp. A1-2
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10/15
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Micropruina (1)
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Thermobifida (1)
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Nocardiopsis (3)
|
nal Nocardiopsis alba
ngv Nocardiopsis gilva
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2/15
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Streptomonospora (1)
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Thermomonospora (1)
|
tcu Thermomonospora curvata
|
9/15
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Actinomadura (1)
|
actw Actinomadura sp. WMMB499
|
10/15
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Streptosporangium (1)
|
sro Streptosporangium roseum
|
5/15
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Nonomuraea (2)
|
noa Nonomuraea sp. ATCC 55076
now Nonomuraea sp. WYY166
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6/15
3/15
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Frankia (5)
|
fre Frankia sp. EAN1pec
fri Frankia inefficax
fal Frankia alni
fsy Candidatus Frankia datiscae
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Acidothermus (1)
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Nakamurella (2)
|
nml Nakamurella multipartita
|
2/15
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Geodermatophilus (1)
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Blastococcus (1)
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Modestobacter (1)
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Kineococcus (1)
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Saccharopolyspora (3)
|
sen Saccharopolyspora erythraea
sace Saccharopolyspora sp. E2A
sacg Saccharopolyspora sp. ASAGF58
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2/15
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Saccharomonospora (2)
|
svi Saccharomonospora viridis
sacc Saccharomonospora sp. 31sw
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3/15
3/15
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Amycolatopsis (11)
|
amd Amycolatopsis mediterranei U32
amn Amycolatopsis mediterranei S699
amm Amycolatopsis mediterranei S699
amz Amycolatopsis mediterranei RB
aoi Amycolatopsis keratiniphila
aja Amycolatopsis japonica
amq Amycolatopsis methanolica
amyc Amycolatopsis sp. AA4
amyb Amycolatopsis sp. BJA-103
aab Amycolatopsis albispora
amyy Amycolatopsis sp. YIM 10
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Pseudonocardia (8)
|
pdx Pseudonocardia dioxanivorans
psea Pseudonocardia sp. AL041005-10
psee Pseudonocardia sp. EC080625-04
pseh Pseudonocardia sp. HH130629-09
pseq Pseudonocardia sp. EC080610-09
pecq Pseudonocardia sp EC080619-01
phh Pseudonocardia sp. HH130630-07
paut Pseudonocardia autotrophica
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Actinosynnema (2)
|
apre Actinosynnema pretiosum
ami Actinosynnema mirum
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2/15
2/15
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Saccharothrix (2)
|
sesp Saccharothrix espanaensis
ssyi Saccharothrix syringae
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2/15
4/15
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Kutzneria (1)
|
kal Kutzneria albida
|
10/15
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Kibdelosporangium (1)
|
kphy Kibdelosporangium phytohabitans
|
10/15
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Lentzea (1)
|
led Lentzea guizhouensis
|
10/15
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Actinoalloteichus (5)
|
ahm Actinoalloteichus hymeniacidonis
ahg Actinoalloteichus hoggarensis
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2/15
2/15
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Alloactinosynnema (1)
|
alo Alloactinosynnema sp. L-07
|
10/15
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Prauserella (1)
|
pmad Prauserella marina
|
10/15
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Salinispora (2)
|
stp Salinispora tropica
saq Salinispora arenicola
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9/15
10/15
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Micromonospora (6)
|
mau Micromonospora aurantiaca
mil Micromonospora sp. L5
micb Micromonospora sp. B006
mtua Micromonospora tulbaghiae
mich Micromonospora sp. HM134
mtem Micromonospora terminaliae
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Verrucosispora (1)
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vma Verrucosispora maris
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6/15
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Actinoplanes (5)
|
ams Actinoplanes missouriensis
actn Actinoplanes sp. N902-109
afs Actinoplanes friuliensis
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10/15
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Plantactinospora (3)
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plab Plantactinospora sp. BC1
plat Plantactinospora sp. BB1
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2/15
2/15
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Phytohabitans (2)
|
psuu Phytohabitans suffuscus
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4/15
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Catenulispora (1)
|
cai Catenulispora acidiphila
|
5/15
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Stackebrandtia (1)
|
Arcanobacterium (2)
|
Mobiluncus (1)
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Trueperella (3)
|
Actinotignum (2)
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Schaalia (2)
|
Actinomyces (11)
|
Flaviflexus (2)
|
Bifidobacterium (56)
|
Gardnerella (3)
|
Scardovia (1)
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Parascardovia (1)
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Thermobispora (1)
|
tbi Thermobispora bispora
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2/15
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Actinopolyspora (1)
|
aey Actinopolyspora erythraea
|
2/15
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Planktophila (6)
|
Nanopelagicus (3)
|
Epidermidibacterium (1)
|
eke Epidermidibacterium keratini
|
3/15
|
unclassified Actinobacteria (1)
|
abai Actinobacteria bacterium
|
5/15
|
Rubrobacter (3)
|
Baekduia (1)
|
bsol Baekduia soli
|
3/15
|
Conexibacter (1)
|
cwo Conexibacter woesei
|
4/15
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Acidimicrobium (1)
|
Ilumatobacter (1)
|
aym Ilumatobacter coccineus
|
5/15
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Cryptobacterium (1)
|
Slackia (1)
|
Eggerthella (2)
|
Gordonibacter (1)
|
Adlercreutzia (1)
|
Denitrobacterium (1)
|
Atopobium (1)
|
Olsenella (2)
|
Parolsenella (1)
|
Coriobacterium (1)
|
Collinsella (1)
|
unclassified Coriobacteriaceae (1)
|
Egibacter (1)
|
Euzebya (1)
|
euz Euzebya sp. DY32-46
|
3/15
|
Cyanobacteria (128)
|
Synechocystis (8)
|
Synechococcus (23)
|
Thermosynechococcus (4)
|
Cyanobium (2)
|
Dactylococcopsis (1)
|
Chamaesiphon (1)
|
Leptolyngbya (4)
|
Halomicronema (1)
|
Pseudanabaena (2)
|
Prochlorococcus (14)
|
Acaryochloris (1)
|
Thermoleptolyngbya (1)
|
Gloeocapsa (1)
|
Geminocystis (2)
|
Chondrocystis (1)
|
Microcystis (4)
|
Cyanobacterium (3)
|
Halothece (1)
|
Euhalothece (1)
|
Atelocyanobacterium (1)
|
Crocosphaera (2)
|
Rippkaea (2)
|
Gloeothece (2)
|
Cyanothece (1)
|
Trichodesmium (1)
|
Microcoleus (1)
|
Arthrospira (1)
|
Planktothrix (1)
|
Oxynema (1)
|
Limnospira (1)
|
Geitlerinema (1)
|
Oscillatoria (2)
|
Moorea (1)
|
Crinalium (1)
|
cep Crinalium epipsammum
|
4/15
|
Gloeobacter (2)
|
Nostoc (8)
|
nop Nostoc sp. PCC 7524
|
2/15
|
Trichormus (2)
|
Anabaena (4)
|
Cylindrospermum (1)
|
Calothrix (3)
|
calh Calothrix sp. 336/3
|
2/15
|
Rivularia (1)
|
riv Rivularia sp. PCC 7116
|
2/15
|
Fischerella (1)
|
Nodularia (1)
|
Dolichospermum (2)
|
Tolypothrix (1)
|
unclassified Nostocales (1)
|
Chroococcidiopsis (1)
|
Pleurocapsa (1)
|
Stanieria (2)
|
unclassified Cyanobacteria (2)
|
unclassified Melainabacteria (1)
|
Chloroflexi (31)
|
Dehalococcoides (12)
|
Dehalogenimonas (3)
|
Roseiflexus (2)
|
rrs Roseiflexus sp. RS-1
rca Roseiflexus castenholzii
|
2/15
2/15
|
Chloroflexus (3)
|
chl Chloroflexus aurantiacus Y-400-fl
|
2/15
|
Herpetosiphon (1)
|
Thermomicrobium (1)
|
tro Thermomicrobium roseum
|
2/15
|
Sphaerobacterineae (1)
|
Anaerolinea (1)
|
Brevefilum (1)
|
Pelolinea (1)
|
unclassified Anaerolineaceae (1)
|
Caldilinea (1)
|
Promineofilum (1)
|
unclassified Ktedonobacterales (1)
|
kbs Ktedonobacterales bacterium SCAWS-G2
|
2/15
|
Tepidiforma (1)
|
Deinococcus-Thermus (33)
|
Deinococcus (16)
Truepera (1)
Thermus (10)
Meiothermus (4)
Oceanithermus (1)
Marinithermus (1)
|
|
Other Terrabacteria group (3)
|
Chthonomonas (1)
Fimbriimonas (1)
Thermobaculum (1)
|
|
Chlamydiae (120)
|
Chlamydia (114)
|
Protochlamydia (2)
|
Parachlamydia (1)
|
puv Parachlamydia acanthamoebae
|
3/15
|
Neochlamydia (1)
|
Waddlia (1)
|
Simkania (1)
|
Verrucomicrobia (14)
|
Opitutus (1)
Lacunisphaera (1)
Nibricoccus (1)
unclassified Opitutaceae (1)
Coraliomargarita (1)
Akkermansia (2)
Roseimicrobium (1)
Luteolibacter (1)
Xiphinematobacter (1)
Methylacidiphilum (2)
unclassified Verrucomicrobia (2)
|
|
Planctomycetes (31)
|
Rhodopirellula (1)
Pirellula (2)
Roseimaritima (1)
Mariniblastus (1)
Thermogutta (1)
Lacipirellula (1)
Planctopirus (2)
Rubinisphaera (1)
Planctomyces (2)
Fuerstia (1)
Gimesia (2)
Bremerella (1)
Gemmata (3)
Tuwongella (1)
Limnoglobus (1)
Isosphaera (1)
Singulisphaera (1)
Paludisphaera (1)
Aquisphaera (1)
Kuenenia (1)
Phycisphaera (1)
Sedimentisphaera (2)
Limihaloglobus (1)
Anaerohalosphaera (1)
|
|
Kiritimatiellaeota (1)
|
Kiritimatiella (1)
|
|
Lentisphaerae (1)
|
unclassified Victivallales (1)
|
|
Spirochaetes (86)
|
Borreliella (19)
|
Borrelia (11)
|
Treponema (23)
|
Sediminispirochaeta (1)
|
Spirochaeta (4)
|
Sphaerochaeta (3)
|
Salinispira (1)
|
Oceanispirochaeta (1)
|
Leptospira (13)
|
lie Leptospira interrogans serovar Lai IPAV
lic Leptospira interrogans serovar Copenhageni
lis Leptospira interrogans serovar Linhai
lbj Leptospira borgpetersenii JB197
lbl Leptospira borgpetersenii L550
lst Leptospira santarosai
laj Leptospira tipperaryensis
lmay Leptospira mayottensis
lkm Leptospira kmetyi
lwl Leptospira weilii
|
2/15
2/15
2/15
2/15
2/15
2/15
2/15
2/15
2/15
2/15
|
Turneriella (1)
|
Brachyspira (9)
|
Acidobacteria (13)
|
Koribacter (1)
Acidobacterium (1)
Granulicella (3)
Terriglobus (3)
Acidisarcina (1)
Edaphobacter (1)
Solibacter (1)
Chloracidobacterium (1)
Luteitalea (1)
|
|
Elusimicrobia (4)
|
Elusimicrobium (1)
Endomicrobium (3)
|
|
Fusobacteria (24)
|
Fusobacterium (13)
Ilyobacter (1)
Leptotrichia (7)
Sebaldella (1)
Streptobacillus (1)
Sneathia (1)
|
|
Synergistetes (6)
|
Thermanaerovibrio (1)
Aminobacterium (1)
Thermovirga (1)
Anaerobaculum (1)
Fretibacterium (1)
Cloacibacillus (1)
|
|
Fibrobacteres (2)
|
Fibrobacter (2)
|
|
Gemmatimonadetes (3)
|
Gemmatimonas (2)
Gemmatirosa (1)
|
|
Bacteroidetes (360)
|
Bacteroides (20)
|
Porphyromonas (6)
|
Fermentimonas (1)
|
Petrimonas (2)
|
Paludibacter (1)
|
Parabacteroides (2)
|
Tannerella (2)
|
Muribaculum (1)
|
Duncaniella (1)
|
Barnesiella (1)
|
Proteiniphilum (1)
|
Dysgonomonas (1)
|
Odoribacter (1)
|
Butyricimonas (1)
|
Azobacteroides (1)
|
Prevotella (10)
|
Alloprevotella (1)
|
Alistipes (6)
|
Mucinivorans (1)
|
unclassified Bacteroidales (1)
|
Draconibacterium (2)
|
Salinivirga (1)
|
Alkalitalea (1)
|
Labilibaculum (1)
|
Salinibacter (2)
|
Rhodothermus (2)
|
unclassified Rhodothermaceae (1)
|
Chitinophaga (4)
|
Niastella (1)
|
Niabella (2)
|
Flavisolibacter (2)
|
Arachidicoccus (4)
|
Filimonas (1)
|
Pseudoflavitalea (1)
|
Panacibacter (1)
|
Pseudobacter (1)
|
Flavihumibacter (1)
|
Haliscomenobacter (1)
|
Saprospira (1)
|
Pedobacter (7)
|
Pseudopedobacter (1)
|
Sphingobacterium (9)
|
Solitalea (1)
|
Mucilaginibacter (8)
|
Anseongella (1)
|
Olivibacter (1)
|
unclassified Sphingobacteriaceae (1)
|
Cyclobacterium (2)
|
Belliella (1)
|
Echinicola (3)
|
Algoriphagus (1)
|
Cytophaga (1)
|
Dyadobacter (1)
|
Spirosoma (6)
|
Leadbetterella (1)
|
Runella (3)
|
Emticicia (1)
|
Fibrella (2)
|
Allopseudarcicella (1)
|
Arcticibacterium (1)
|
Rhodocytophaga (1)
|
Flexibacter (1)
|
Hymenobacter (10)
|
Pontibacter (2)
|
Rufibacter (3)
|
Nibribacter (1)
|
Marivirga (1)
|
Flammeovirga (2)
|
Fabibacter (1)
|
unclassified Flammeovirgaceae (1)
|
Amoebophilus (1)
|
Cardinium (3)
|
Chryseolinea (1)
|
Gramella (4)
|
Flavobacterium (25)
|
Capnocytophaga (13)
|
Robiginitalea (1)
|
Zunongwangia (1)
|
Croceibacter (1)
|
Riemerella (6)
|
Maribacter (5)
|
Cellulophaga (5)
|
Weeksella (1)
|
Dokdonia (4)
|
Lacinutrix (3)
|
Zobellia (1)
|
Muricauda (3)
|
Aequorivita (2)
|
Ornithobacterium (2)
|
Psychroflexus (1)
|
Nonlabens (5)
|
Polaribacter (5)
|
Elizabethkingia (9)
|
Myroides (4)
|
Chryseobacterium (15)
|
Winogradskyella (2)
|
Siansivirga (1)
|
Algibacter (1)
|
Sediminicola (1)
|
Tenacibaculum (5)
|
ten Tenacibaculum sp. LPB0136
|
2/15
|
Lutibacter (1)
|
Urechidicola (1)
|
Wenyingzhuangia (1)
|
Formosa (3)
|
Salegentibacter (1)
|
Seonamhaeicola (1)
|
Arenibacter (1)
|
Olleya (2)
|
Flavivirga (1)
|
Tamlana (1)
|
Aureitalea (1)
|
Spongiibacterium (1)
|
Kordia (2)
|
Mariniflexile (1)
|
Aquimarina (3)
|
Euzebyella (1)
|
Cloacibacterium (1)
|
Muriicola (1)
|
Psychroserpens (1)
|
Antarcticibacterium (2)
|
Empedobacter (1)
|
Oceanihabitans (1)
|
Bergeyella (1)
|
Marinirhabdus (1)
|
Apibacter (1)
|
Mesoflavibacter (1)
|
Galbibacter (1)
|
unclassified Flavobacteriaceae (3)
|
Sulcia (9)
|
Blattabacterium (9)
|
Fluviicola (2)
|
Owenweeksia (1)
|
Ichthyobacterium (1)
|
Walczuchella (1)
|
Uzinura (1)
|
unclassified Bacteroidetes (1)
|
Chlorobi (17)
|
Chlorobaculum (3)
Chlorobium (5)
Pelodictyon (2)
Prosthecochloris (4)
Chloroherpeton (1)
Ignavibacterium (1)
Melioribacter (1)
|
|
Balneolaeota (1)
|
Cyclonatronum (1)
|
|
Cloacimonetes (1)
|
Cloacimonas (1)
|
|
Aquificae (14)
|
Aquifex (1)
Hydrogenobaculum (3)
Hydrogenobacter (2)
Thermocrinis (2)
Sulfurihydrogenibium (2)
Persephonella (1)
Thermosulfidibacter (1)
Thermovibrio (1)
Desulfurobacterium (1)
|
|
Thermotogae (32)
|
Thermotoga (13)
Pseudothermotoga (3)
Thermosipho (4)
Fervidobacterium (3)
Petrotoga (1)
Marinitoga (2)
Defluviitoga (1)
Kosmotoga (2)
Mesotoga (2)
Athalassotoga (1)
|
|
Coprothermobacterota (1)
|
Coprothermobacter (1)
|
|
Caldiserica (1)
|
Caldisericum (1)
|
|
Chrysiogenetes (1)
|
Desulfurispirillum (1)
|
|
Deferribacteres (5)
|
Deferribacter (1)
Denitrovibrio (1)
Calditerrivibrio (1)
Flexistipes (1)
Geovibrio (1)
|
|
Calditrichaeota (1)
|
Caldithrix (1)
|
|
Dictyoglomi (2)
|
Dictyoglomus (2)
|
|
Nitrospirae (9)
|
Thermodesulfovibrio (1)
|
Nitrospira (4)
|
nmv Nitrospira moscoviensis
|
2/15
|
Leptospirillum (4)
|
Thermodesulfobacteria (7)
|
Thermodesulfatator (1)
Thermodesulfobacterium (3)
Caldimicrobium (1)
Thermosulfuriphilus (1)
Thermosulfurimonas (1)
|
|
Saccharibacteria (4)
|
Saccharimonas (4)
|
|
Peregrinibacteria (1)
|
Peribacter (1)
|
|
Bipolaricaulota (2)
|
Bipolaricaulis (2)
|
|
Other (4)
|
Vampirococcus (1)
Methylomirabilis (1)
Chazhemtobacterium (1)
Babela (1)
|
|
unclassified Bacteria (11)
|
|
|
Archaea (326)
|
Euryarchaeota (226)
|
Methanocaldococcus (6)
Methanotorris (1)
Methanococcus (11)
Methanothermococcus (1)
Methanofervidicoccus (1)
Methanothermobacter (8)
Methanosphaera (2)
Methanobrevibacter (6)
Methanobacterium (10)
Methanothermus (1)
Methanopyrus (1)
Archaeoglobus (5)
Ferroglobus (1)
Geoglobus (2)
Thermoplasma (2)
Picrophilus (1)
Ferroplasma (2)
Cuniculiplasma (1)
unclassified Thermoplasmatales (1)
Methanomethylophilus (1)
Methanomassiliicoccus (1)
Methanoplasma (1)
unclassified Thermoplasmata (1)
Aciduliprofundum (2)
Pyrococcus (8)
Thermococcus (27)
Palaeococcus (1)
Methanosarcina (23)
Methanococcoides (2)
Methanohalophilus (2)
Methanohalobium (1)
Methanosalsum (1)
Methanolobus (2)
Methanomethylovorans (1)
Methanosaeta (3)
Methanospirillum (1)
Methanocorpusculum (1)
Methanoculleus (3)
Methanolacinia (1)
Methanoregula (2)
Methanosphaerula (1)
Methanocella (3)
Halobacterium (4)
Halalkalicoccus (1)
Halodesulfurarchaeum (2)
Halanaeroarchaeum (2)
Salarchaeum (1)
Halarchaeum (1)
Haloarcula (6)
Natronomonas (2)
Halorhabdus (3)
Halomicrobium (3)
Halorientalis (1)
Halapricum (1)
unclassified Haloarculaceae (1)
Haloquadratum (2)
Haloferax (4)
Halogeometricum (1)
Haloplanus (4)
Halobellus (1)
Haloprofundus (1)
Halorubrum (5)
Salinigranum (1)
Halohasta (1)
Halolamina (1)
Halobonum (1)
Halalkaliarchaeum (1)
unclassified Haloferacales (1)
Haloterrigena (3)
Natrialba (1)
Halopiger (1)
Natrinema (4)
Natronobacterium (1)
Halovivax (1)
Natronococcus (1)
Salinarchaeum (1)
Halostagnicola (1)
Halobiforma (1)
Natronolimnobius (3)
Natronorubrum (2)
Natrialbaceae (1)
unclassified Nanohaloarchaea (1)
|
|
Crenarchaeota (71)
|
Aeropyrum (2)
Staphylothermus (2)
Ignicoccus (2)
Desulfurococcus (3)
Thermosphaera (1)
Ignisphaera (1)
Thermogladius (1)
Hyperthermus (1)
Pyrolobus (1)
Pyrodictium (1)
Sulfurisphaera (2)
Saccharolobus (5)
Sulfolobus (15)
Metallosphaera (5)
Acidianus (5)
Sulfodiicoccus (1)
Stygiolobus (1)
Sulfuracidifex (1)
Pyrobaculum (8)
Caldivirga (1)
Thermoproteus (2)
Vulcanisaeta (2)
Thermofilum (4)
Acidilobus (2)
Caldisphaera (1)
Fervidicoccus (1)
|
|
Thaumarchaeota (18)
|
Nitrosopumilus (6)
Nitrosomarinus (1)
Cenarchaeum (1)
Nitrososphaera (3)
Nitrosocosmicus (2)
Nitrosocaldus (1)
Caldiarchaeum (1)
Nitrosopelagicus (1)
Nitrosotenuis (1)
Nitrosotalea (1)
|
|
Korarchaeota (1)
|
Korarchaeum (1)
|
|
Bathyarchaeota (2)
|
unclassified Bathyarchaeota (2)
|
|
Geothermarchaeota (1)
|
Conexivisphaera (1)
|
|
Nanoarchaeota (2)
|
Nanoarchaeum (1)
Nanopusillus (1)
|
|
Micrarchaeota (1)
|
Candidatus Mancarchaeum (1)
|
|
Lokiarchaeota (2)
|
Lokiarchaeum (1)
Prometheoarchaeum (1)
|
|
unclassified Archaea (2)
|
KEGG Organisms