KEGG Organisms

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 Eukaryotes (541)
 
   Animals (250)
     Vertebrates (146)
       Mammals (66)
         hsa  Homo sapiens (human)
         ptr  Pan troglodytes (chimpanzee)
         pps  Pan paniscus (bonobo)
         ggo  Gorilla gorilla gorilla (western lowland gorilla)
         pon  Pongo abelii (Sumatran orangutan)
         nle  Nomascus leucogenys (northern white-cheeked gibbon)
         mcc  Macaca mulatta (rhesus monkey)
         mcf  Macaca fascicularis (crab-eating macaque)
         csab  Chlorocebus sabaeus (green monkey)
         rro  Rhinopithecus roxellana (golden snub-nosed monkey)
         rbb  Rhinopithecus bieti (black snub-nosed monkey)
         cjc  Callithrix jacchus (white-tufted-ear marmoset)
         sbq  Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
         mmu  Mus musculus (mouse)
         mcal  Mus caroli (Ryukyu mouse)
         mpah  Mus pahari (shrew mouse)
         rno  Rattus norvegicus (rat)
         mun  Meriones unguiculatus (Mongolian gerbil)
         cge  Cricetulus griseus (Chinese hamster)
         ngi  Nannospalax galili (Upper Galilee mountains blind mole rat)
         hgl  Heterocephalus glaber (naked mole rat)
         ccan  Castor canadensis (American beaver)
         ocu  Oryctolagus cuniculus (rabbit)
         tup  Tupaia chinensis (Chinese tree shrew)
         cfa  Canis familiaris (dog)
         vvp  Vulpes vulpes (red fox)
         aml  Ailuropoda melanoleuca (giant panda)
         umr  Ursus maritimus (polar bear)
         uah  Ursus arctos horribilis
         oro  Odobenus rosmarus divergens (Pacific walrus)
         elk  Enhydra lutris kenyoni (northern sea otter)
         fca  Felis catus (domestic cat)
         ptg  Panthera tigris altaica (Amur tiger)
         ppad  Panthera pardus (leopard)
         aju  Acinonyx jubatus (cheetah)
         bta  Bos taurus (cow)
         bom  Bos mutus (wild yak)
         biu  Bos indicus (zebu cattle)
         bbub  Bubalus bubalis (water buffalo)
         chx  Capra hircus (goat)
         oas  Ovis aries (sheep)
         ssc  Sus scrofa (pig)
         cfr  Camelus ferus (Wild Bactrian camel)
         cdk  Camelus dromedarius (Arabian camel)
         bacu  Balaenoptera acutorostrata scammoni (minke whale)
         lve  Lipotes vexillifer (Yangtze River dolphin)
         oor  Orcinus orca (killer whale)
         dle  Delphinapterus leucas (beluga whale)
         pcad  Physeter catodon (sperm whale)
         ecb  Equus caballus (horse)
         epz  Equus przewalskii (Przewalski's horse)
         eai  Equus asinus (ass)
         myb  Myotis brandtii (Brandt's bat)
         myd  Myotis davidii
         mna  Miniopterus natalensis
         hai  Hipposideros armiger (great roundleaf bat)
         dro  Desmodus rotundus (common vampire bat)
         pale  Pteropus alecto (black flying fox)
         ray  Rousettus aegyptiacus (Egyptian rousette)
         mjv  Manis javanica (Malayan pangolin)
         lav  Loxodonta africana (African savanna elephant)
         tmu  Trichechus manatus latirostris (Florida manatee)
         mdo  Monodelphis domestica (opossum)
         shr  Sarcophilus harrisii (Tasmanian devil)
         pcw  Phascolarctos cinereus (koala)
         oaa  Ornithorhynchus anatinus (platypus)
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       Birds (24)
         gga  Gallus gallus (chicken)
         mgp  Meleagris gallopavo (turkey)
         cjo  Coturnix japonica (Japanese quail)
         nmel  Numida meleagris (helmeted guineafowl)
         apla  Anas platyrhynchos (mallard)
         acyg  Anser cygnoides domesticus (swan goose)
         tgu  Taeniopygia guttata (zebra finch)
         lsr  Lonchura striata domestica (Bengalese finch)
         scan  Serinus canaria (common canary)
         gfr  Geospiza fortis (medium ground-finch)
         fab  Ficedula albicollis (collared flycatcher)
         phi  Pseudopodoces humilis (Tibetan ground-tit)
         pmaj  Parus major (Great Tit)
         ccae  Cyanistes caeruleus (blue tit)
         ccw  Corvus cornix (hooded crow)
         etl  Empidonax traillii (willow flycatcher)
         fpg  Falco peregrinus (peregrine falcon)
         fch  Falco cherrug (Saker falcon)
         clv  Columba livia (rock pigeon)
         egz  Egretta garzetta (little egret)
         nni  Nipponia nippon (crested ibis)
         acun  Athene cunicularia (burrowing owl)
         padl  Pygoscelis adeliae (Adelie penguin)
         aam  Apteryx mantelli mantelli (brown kiwi)
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       Reptiles (12)
         asn  Alligator sinensis (Chinese alligator)
         amj  Alligator mississippiensis (American alligator)
         pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
         cmy  Chelonia mydas (green sea turtle)
         cpic  Chrysemys picta (western painted turtle)
         acs  Anolis carolinensis (green anole)
         pvt  Pogona vitticeps (central bearded dragon)
         pbi  Python bivittatus (Burmese python)
         pmur  Protobothrops mucrosquamatus (Taiwan habu)
         tsr  Thamnophis sirtalis
         pmua  Podarcis muralis (common wall lizard)
         gja  Gekko japonicus
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       Amphibians (3)
         xla  Xenopus laevis (African clawed frog)
         xtr  Xenopus tropicalis (western clawed frog)
         npr  Nanorana parkeri
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       Fishes (39)
         dre  Danio rerio (zebrafish)
         srx  Sinocyclocheilus rhinocerous
         sanh  Sinocyclocheilus anshuiensis
         sgh  Sinocyclocheilus grahami
         ccar  Cyprinus carpio (common carp)
         ipu  Ictalurus punctatus (channel catfish)
         phyp  Pangasianodon hypophthalmus (striped catfish)
         amex  Astyanax mexicanus (Mexican tetra)
         eee  Electrophorus electricus (electric eel)
         tru  Takifugu rubripes (torafugu)
         tng  Tetraodon nigroviridis (spotted green pufferfish)
         lco  Larimichthys crocea (large yellow croaker)
         ncc  Notothenia coriiceps (black rockcod)
         mze  Maylandia zebra (zebra mbuna)
         onl  Oreochromis niloticus (Nile tilapia)
         ola  Oryzias latipes (Japanese medaka)
         xma  Xiphophorus maculatus (southern platyfish)
         xco  Xiphophorus couchianus (Monterrey platyfish)
         pret  Poecilia reticulata (guppy)
         cvg  Cyprinodon variegatus (sheepshead minnow)
         nfu  Nothobranchius furzeri (turquoise killifish)
         kmr  Kryptolebias marmoratus (mangrove rivulus)
         alim  Austrofundulus limnaeus (annual killifish)
         aoce  Amphiprion ocellaris (clown anemonefish)
         csem  Cynoglossus semilaevis (tongue sole)
         pov  Paralichthys olivaceus (Japanese flounder)
         lcf  Lates calcarifer (barramundi perch)
         sdu  Seriola dumerili (greater amberjack)
         slal  Seriola lalandi dorsalis (Yellowtail amberjack)
         hcq  Hippocampus comes (tiger tail seahorse)
         bpec  Boleophthalmus pectinirostris (great blue-spotted mudskipper)
         malb  Monopterus albus (swamp eel)
         sasa  Salmo salar (Atlantic salmon)
         otw  Oncorhynchus tshawytscha (Chinook salmon)
         salp  Salvelinus alpinus (Arctic char)
         els  Esox lucius (northern pike)
         sfm  Scleropages formosus (Asian bonytongue)
         pki  Paramormyrops kingsleyae
         lcm  Latimeria chalumnae (coelacanth)
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       Cartilaginous fishes (2)
         cmk  Callorhinchus milii (elephant shark)
         rtp  Rhincodon typus (whale shark)
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     Lancelets (1)
       bfo  Branchiostoma floridae (Florida lancelet)
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     Ascidians (1)
       cin  Ciona intestinalis (sea squirt)
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     Echinoderms (2)
       spu  Strongylocentrotus purpuratus (purple sea urchin)
       aplc  Acanthaster planci (crown-of-thorns starfish)
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     Hemichordates (1)
       sko  Saccoglossus kowalevskii (acorn worm)
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     Arthropods (72)
       Insects (65)
         dme  Drosophila melanogaster (fruit fly)
         der  Drosophila erecta
         dse  Drosophila sechellia
         dsi  Drosophila simulans
         dya  Drosophila yakuba
         dan  Drosophila ananassae
         dsr  Drosophila serrata
         dpo  Drosophila pseudoobscura pseudoobscura
         dpe  Drosophila persimilis
         dmn  Drosophila miranda
         dwi  Drosophila willistoni
         dgr  Drosophila grimshawi
         dmo  Drosophila mojavensis
         daz  Drosophila arizonae
         dnv  Drosophila navojoa
         dhe  Drosophila hydei
         dvi  Drosophila virilis
         mde  Musca domestica (house fly)
         lcq  Lucilia cuprina (Australian sheep blowfly)
         aga  Anopheles gambiae (mosquito)
         aag  Aedes aegypti (yellow fever mosquito)
         aalb  Aedes albopictus (Asian tiger mosquito)
         cqu  Culex quinquefasciatus (southern house mosquito)
         ame  Apis mellifera (honey bee)
         bim  Bombus impatiens (common eastern bumble bee)
         bter  Bombus terrestris (buff-tailed bumblebee)
         ccal  Ceratina calcarata (carpenter bee)
         obb  Osmia bicornis bicornis
         soc  Solenopsis invicta (red fire ant)
         mpha  Monomorium pharaonis (pharaoh ant)
         aec  Acromyrmex echinatior (Panamanian leafcutter ant)
         acep  Atta cephalotes (leaf cutting ant)
         pbar  Pogonomyrmex barbatus (red harvester ant)
         vem  Vollenhovia emeryi
         hst  Harpegnathos saltator (Jerdon's jumping ant)
         dqu  Dinoponera quadriceps
         cfo  Camponotus floridanus (Florida carpenter ant)
         lhu  Linepithema humile (Argentine ant)
         pgc  Pseudomyrmex gracilis
         obo  Ooceraea biroi (clonal raider ant)
         pcf  Polistes canadensis
         nvi  Nasonia vitripennis (jewel wasp)
         csol  Ceratosolen solmsi marchali
         mdl  Microplitis demolitor
         tca  Tribolium castaneum (red flour beetle)
         dpa  Dendroctonus ponderosae (mountain pine beetle)
         atd  Aethina tumida (small hive beetle)
         nvl  Nicrophorus vespilloides
         bmor  Bombyx mori (domestic silkworm)
         bman  Bombyx mandarina (wild silkworm)
         dpl  Danaus plexippus (monarch butterfly)
         pmac  Papilio machaon (common yellow swallowtail)
         prap  Pieris rapae (cabbage white)
         haw  Helicoverpa armigera (cotton bollworm)
         tnl  Trichoplusia ni (cabbage looper)
         pxy  Plutella xylostella (diamondback moth)
         api  Acyrthosiphon pisum (pea aphid)
         dnx  Diuraphis noxia (Russian wheat aphid)
         ags  Aphis gossypii (cotton aphid)
         rmd  Rhopalosiphum maidis (corn leaf aphid)
         btab  Bemisia tabaci (sweet potato whitefly)
         clec  Cimex lectularius (bed bug)
         phu  Pediculus humanus corporis (human body louse)
         zne  Zootermopsis nevadensis
         fcd  Folsomia candida
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       Crustaceans (2)
         dpx  Daphnia pulex (common water flea)
         pvm  Penaeus vannamei (Pacific white shrimp)
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       Chelicerates (5)
         isc  Ixodes scapularis (black-legged tick)
         tut  Tetranychus urticae (two-spotted spider mite)
         dpte  Dermatophagoides pteronyssinus (European house dust mite)
         cscu  Centruroides sculpturatus (bark scorpion)
         ptep  Parasteatoda tepidariorum (common house spider)
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     Nematodes (6)
       cel  Caenorhabditis elegans (nematode)
       cbr  Caenorhabditis briggsae
       bmy  Brugia malayi (filaria)
       loa  Loa loa (eye worm)
       nai  Necator americanus
       tsp  Trichinella spiralis
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     Annelids (1)
       hro  Helobdella robusta
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     Mollusks (5)
       lgi  Lottia gigantea (owl limpet)
       pcan  Pomacea canaliculata (golden apple snail)
       crg  Crassostrea gigas (Pacific oyster)
       myi  Mizuhopecten yessoensis (Yesso scallop)
       obi  Octopus bimaculoides
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     Brachiopodas (1)
       lak  Lingula anatina
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     Flatworms (4)
       smm  Schistosoma mansoni
       shx  Schistosoma haematobium
       ovi  Opisthorchis viverrini
       egl  Echinococcus granulosus
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     Cnidarians (8)
       nve  Nematostella vectensis (sea anemone)
       epa  Exaiptasia pallida
       adf  Acropora digitifera (stony coral)
       amil  Acropora millepora
       pdam  Pocillopora damicornis (lace coral)
       spis  Stylophora pistillata
       dgt  Dendronephthya gigantea (soft corals)
       hmg  Hydra vulgaris
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     Placozoans (1)
       tad  Trichoplax adhaerens
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     Poriferans (1)
       aqu  Amphimedon queenslandica (sponge)
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   Plants (106)
     Eudicots (75)
       Mustard family (9)
         ath  Arabidopsis thaliana (thale cress)
         aly  Arabidopsis lyrata (lyrate rockcress)
         crb  Capsella rubella
         csat  Camelina sativa (false flax)
         eus  Eutrema salsugineum
         brp  Brassica rapa (field mustard)
         bna  Brassica napus (rape)
         boe  Brassica oleracea (wild cabbage)
         rsz  Raphanus sativus (radish)
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       Caper family (1)
         thj  Tarenaya hassleriana (spider flower)
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       Papaya family (1)
         cpap  Carica papaya (papaya)
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       Rue family (2)
         cit  Citrus sinensis (Valencia orange)
         cic  Citrus clementina (mandarin orange)
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       Mallow family (5)
         tcc  Theobroma cacao (cacao)
         gra  Gossypium raimondii
         ghi  Gossypium hirsutum (upland cotton)
         gab  Gossypium arboreum
         dzi  Durio zibethinus (durian)
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       Myrtle family (1)
         egr  Eucalyptus grandis (rose gum)
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       Pea family (13)
         gmx  Glycine max (soybean)
         gsj  Glycine soja (wild soybean)
         pvu  Phaseolus vulgaris (common bean)
         vra  Vigna radiata (mung bean)
         var  Vigna angularis (adzuki bean)
         vun  Vigna unguiculata (cowpea)
         ccaj  Cajanus cajan (pigeon pea)
         mtr  Medicago truncatula (barrel medic)
         cam  Cicer arietinum (chickpea)
         lja  Lotus japonicus
         adu  Arachis duranensis
         aip  Arachis ipaensis
         lang  Lupinus angustifolius (narrow-leaved blue lupine)
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       Rose family (7)
         fve  Fragaria vesca (woodland strawberry)
         rcn  Rosa chinensis (China rose)
         pper  Prunus persica (peach)
         pmum  Prunus mume (Japanese apricot)
         pavi  Prunus avium (sweet cherry)
         mdm  Malus domestica (apple)
         pxb  Pyrus x bretschneideri (Chinese white pear)
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       Buckthorn family (1)
         zju  Ziziphus jujuba (Chinese jujube)
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       Cucumber family (6)
         csv  Cucumis sativus (cucumber)
         cmo  Cucumis melo (muskmelon)
         mcha  Momordica charantia (bitter melon)
         cmax  Cucurbita maxima (winter squash)
         cmos  Cucurbita moschata (crookneck pumpkin)
         cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
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       Spurge family (4)
         rcu  Ricinus communis (castor bean)
         jcu  Jatropha curcas
         hbr  Hevea brasiliensis (rubber tree)
         mesc  Manihot esculenta (cassava)
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       Willow family (2)
         pop  Populus trichocarpa (black cottonwood)
         peu  Populus euphratica (Euphrates poplar)
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       Walnut family (1)
         jre  Juglans regia (English walnut)
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       Beech family (1)
         qsu  Quercus suber (cork oak)
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       Grape family (1)
         vvi  Vitis vinifera (wine grape)
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       Nightshade family (8)
         sly  Solanum lycopersicum (tomato)
         spen  Solanum pennellii
         sot  Solanum tuberosum (potato)
         cann  Capsicum annuum
         nta  Nicotiana tabacum (common tobacco)
         nsy  Nicotiana sylvestris
         nto  Nicotiana tomentosiformis
         nau  Nicotiana attenuata
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       Morning-glory family (1)
         ini  Ipomoea nil (Japanese morning glory)
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       Sesame family (1)
         sind  Sesamum indicum (sesame)
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       Olive family (1)
         oeu  Olea europaea var. sylvestris (wild olive)
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       Daisy family (3)
         han  Helianthus annuus (common sunflower)
         lsv  Lactuca sativa (garden lettuce)
         ccav  Cynara cardunculus var. scolymus (artichoke)
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       Parsley family (1)
         dcr  Daucus carota (carrot)
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       Amaranth family (3)
         bvg  Beta vulgaris (sugar beet)
         soe  Spinacia oleracea (spinach)
         cqi  Chenopodium quinoa (quinoa)
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       Lotus family (1)
         nnu  Nelumbo nucifera (sacred lotus)
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       Poppy family (1)
         psom  Papaver somniferum (opium poppy)
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     Monocots (14)
       Grass family (8)
         osa  Oryza sativa japonica (Japanese rice) (RefSeq)
         dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
         obr  Oryza brachyantha (malo sina)
         bdi  Brachypodium distachyon
         ats  Aegilops tauschii (wheat D)
         sbi  Sorghum bicolor (sorghum)
         zma  Zea mays (maize)
         sita  Setaria italica (foxtail millet)
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       Palm family (2)
         pda  Phoenix dactylifera (date palm)
         egu  Elaeis guineensis (African oil palm)
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       Banana family (1)
         mus  Musa acuminata (wild Malaysian banana)
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       Orchid family (2)
         dct  Dendrobium catenatum
         peq  Phalaenopsis equestris
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       Asparagus family (1)
         aof  Asparagus officinalis (garden asparagus)
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     Basal Magnoliophyta (1)
       Amborella family (1)
         atr  Amborella trichopoda
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     Ferns (1)
       smo  Selaginella moellendorffii
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     Mosses (1)
       ppp  Physcomitrium patens
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     Green algae (11)
       cre  Chlamydomonas reinhardtii
       vcn  Volvox carteri f. nagariensis
       mng  Monoraphidium neglectum
       csl  Coccomyxa subellipsoidea
       cvr  Chlorella variabilis
       apro  Auxenochlorella protothecoides
       olu  Ostreococcus lucimarinus
       ota  Ostreococcus tauri
       bpg  Bathycoccus prasinos
       mis  Micromonas commoda
       mpp  Micromonas pusilla
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140/307
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     Red algae (3)
       cme  Cyanidioschyzon merolae
       gsl  Galdieria sulphuraria
       ccp  Chondrus crispus (carragheen)
218/307
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   Fungi (133)
     Ascomycetes (95)
       Saccharomycetes (32)
         sce  Saccharomyces cerevisiae (budding yeast)
         ago  Ashbya gossypii (Eremothecium gossypii)
         erc  Eremothecium cymbalariae
         kla  Kluyveromyces lactis
         kmx  Kluyveromyces marxianus
         lth  Lachancea thermotolerans
         vpo  Vanderwaltozyma polyspora
         zro  Zygosaccharomyces rouxii
         cgr  Candida glabrata
         ncs  Naumovozyma castellii
         ndi  Naumovozyma dairenensis
         tpf  Tetrapisispora phaffii
         tbl  Tetrapisispora blattae
         tdl  Torulaspora delbrueckii
         kaf  Kazachstania africana
         ppa  Komagataella phaffii
         dha  Debaryomyces hansenii
         pic  Scheffersomyces stipitis
         pgu  Meyerozyma guilliermondii
         spaa  Spathaspora passalidarum
         lel  Lodderomyces elongisporus
         cal  Candida albicans
         ctp  Candida tropicalis
         cot  Candida orthopsilosis
         cdu  Candida dubliniensis
         cten  Yamadazyma tenuis
         yli  Yarrowia lipolytica
         clu  Clavispora lusitaniae ATCC 42720
         clus  Clavispora lusitaniae CBS 6936
         caur  Candida auris
         slb  Sugiyamaella lignohabitans
         pkz  Pichia kudriavzevii
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       Sordariomycetes (27)
         ncr  Neurospora crassa
         nte  Neurospora tetrasperma
         smp  Sordaria macrospora
         pan  Podospora anserina
         ttt  Thermothielavioides terrestris
         mtm  Thermothelomyces thermophilus
         cthr  Chaetomium thermophilum
         mgr  Pyricularia oryzae
         tmn  Phaeoacremonium minimum
         ssck  Sporothrix schenckii
         fgr  Fusarium graminearum
         fpu  Fusarium pseudograminearum
         fvr  Fusarium verticillioides
         fox  Fusarium oxysporum
         nhe  Nectria haematococca
         tre  Trichoderma reesei QM6a
         trr  Trichoderma reesei RUT C-30
         maw  Metarhizium acridum
         maj  Metarhizium robertsii
         cmt  Cordyceps militaris
         plj  Purpureocillium lilacinum
         val  Verticillium alfalfae
         vda  Verticillium dahliae
         cfj  Colletotrichum fioriniae
         sapo  Scedosporium apiospermum
         ela  Eutypa lata
         pfy  Pestalotiopsis fici
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       Leotiomycetes (5)
         ssl  Sclerotinia sclerotiorum
         bfu  Botrytis cinerea
         mbe  Marssonina brunnea
         psco  Phialocephala scopiformis
         glz  Glarea lozoyensis
220/307
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       Eurotiomycetes (19)
         ani  Aspergillus nidulans
         afm  Aspergillus fumigatus
         act  Aspergillus clavatus
         nfi  Aspergillus fischeri
         aor  Aspergillus oryzae
         ang  Aspergillus niger
         afv  Aspergillus flavus
         pcs  Penicillium rubens
         pdp  Penicillium digitatum
         tmf  Talaromyces marneffei
         cim  Coccidioides immitis
         cpw  Coccidioides posadasii
         pbl  Paracoccidioides lutzii Pb01
         pbn  Paracoccidioides brasiliensis
         ure  Uncinocarpus reesii
         abe  Trichophyton benhamiae
         tve  Trichophyton verrucosum
         aje  Histoplasma capsulatum
         bgh  Blastomyces gilchristii
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       Dothideomycetes (10)
         pno  Parastagonospora nodorum
         pte  Pyrenophora teres
         bze  Bipolaris zeicola
         bsc  Bipolaris sorokiniana
         bor  Bipolaris oryzae
         aalt  Alternaria alternata
         ztr  Zymoseptoria tritici
         pfj  Pseudocercospora fijiensis
         bcom  Baudoinia panamericana
         npa  Neofusicoccum parvum
200/307
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       Pezizomycetes (1)
         tml  Tuber melanosporum
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       Schizosaccharomycetes (1)
         spo  Schizosaccharomyces pombe (fission yeast)
214/307
     Basidiomycetes (33)
       cne  Cryptococcus neoformans var. neoformans JEC21
       cnb  Cryptococcus neoformans var. neoformans B-3501A
       cgi  Cryptococcus gattii
       tms  Tremella mesenterica
       tasa  Trichosporon asahii var. asahii
       ppl  Postia placenta
       tvs  Trametes versicolor
       dsq  Dichomitus squalens
       pco  Phanerochaete carnosa
       shs  Stereum hirsutum
       hir  Heterobasidion irregulare
       psq  Punctularia strigosozonata
       adl  Auricularia subglabra
       fme  Fomitiporia mediterranea
       gtr  Gloeophyllum trabeum
       lbc  Laccaria bicolor
       mrr  Moniliophthora roreri
       cci  Coprinopsis cinerea
       scm  Schizophyllum commune
       abp  Agaricus bisporus var. burnettii JB137-S8
       abv  Agaricus bisporus var. bisporus H97
       cput  Coniophora puteana
       sla  Serpula lacrymans
       wse  Wallemia mellicola
       wic  Wallemia ichthyophaga
       uma  Ustilago maydis
       pfp  Anthracocystis flocculosa
       mgl  Malassezia globosa
       mrt  Malassezia restricta
       msym  Malassezia sympodialis
       pgr  Puccinia graminis
       mlr  Melampsora larici-populina
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     Microsporidians (5)
       ecu  Encephalitozoon cuniculi
       ein  Encephalitozoon intestinalis
       ehe  Encephalitozoon hellem
       ero  Encephalitozoon romaleae
       nce  Nosema ceranae
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   Protists (52)
     Choanoflagellates (2)
       mbr  Monosiga brevicollis
       sre  Salpingoeca rosetta
128/307
166/307
     Amoebozoa (7)
       Dictyostelia (3)
         ddi  Dictyostelium discoideum (cellular slime mold)
         dpp  Dictyostelium purpureum (cellular slime mold)
         dfa  Cavenderia fasciculata (cellular slime mold)
224/307
242/307
212/307
       Entamoeba (3)
         ehi  Entamoeba histolytica
         edi  Entamoeba dispar
         eiv  Entamoeba invadens
180/307
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180/307
       Acanthamoeba (1)
         acan  Acanthamoeba castellanii
182/307
     Alveolates (21)
       Apicomplexans (18)
         pfa  Plasmodium falciparum 3D7
         pfd  Plasmodium falciparum Dd2
         pfh  Plasmodium falciparum HB3
         pyo  Plasmodium yoelii
         pcb  Plasmodium chabaudi
         pbe  Plasmodium berghei
         pkn  Plasmodium knowlesi
         pvx  Plasmodium vivax
         pcy  Plasmodium cynomolgi
         tan  Theileria annulata
         tpv  Theileria parva
         tot  Theileria orientalis
         beq  Theileria equi
         bbo  Babesia bovis
         bmic  Babesia microti
         cpv  Cryptosporidium parvum
         cho  Cryptosporidium hominis
         tgo  Toxoplasma gondii
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188/307
128/307
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       Ciliates (2)
         tet  Tetrahymena thermophila
         ptm  Paramecium tetraurelia
204/307
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       Dinoflagellates (1)
         smin  Breviolum minutum
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     Stramenopiles (8)
       Diatoms (3)
         pti  Phaeodactylum tricornutum
         fcy  Fragilariopsis cylindrus
         tps  Thalassiosira pseudonana
 96/307
104/307
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       Eustigmatophytes (1)
         ngd  Nannochloropsis gaditana
 20/307
       Pelagophytes (1)
         aaf  Aureococcus anophagefferens
140/307
       Oomycetes (3)
         pif  Phytophthora infestans
         psoj  Phytophthora sojae
         spar  Saprolegnia parasitica
224/307
224/307
224/307
     Haptophyta (1)
       ehx  Emiliania huxleyi
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     Cryptomonads (1)
       gtt  Guillardia theta
178/307
     Euglenozoa (9)
       Kinetoplasts (9)
         tbr  Trypanosoma brucei brucei
         tbg  Trypanosoma brucei gambiense
         tcr  Trypanosoma cruzi
         lma  Leishmania major
         lif  Leishmania infantum
         ldo  Leishmania donovani
         lmi  Leishmania mexicana
         lbz  Leishmania braziliensis
         lpan  Leishmania panamensis
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160/307
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     Heterolobosea (1)
       Tetramitia (1)
         ngr  Naegleria gruberi
200/307
     Metamonada (2)
       Trichomonads (1)
         tva  Trichomonas vaginalis
 60/307
       Diplomonads (1)
         gla  Giardia lamblia
180/307
 
 Prokaryotes (6085)
 
   Bacteria (5762)
     Gammaproteobacteria - Enterobacteria (510)
       Escherichia (69)
         eco  Escherichia coli K-12 MG1655
         ecj  Escherichia coli K-12 W3110
         ecd  Escherichia coli K-12 DH10B
         ebw  Escherichia coli K-12 BW2952
         ecok  Escherichia coli K-12 MDS42
         ece  Escherichia coli O157:H7 EDL933 (EHEC)
         ecs  Escherichia coli O157:H7 Sakai (EHEC)
         ecf  Escherichia coli O157:H7 EC4115 (EHEC)
         etw  Escherichia coli O157:H7 TW14359 (EHEC)
         elx  Escherichia coli O157:H7 Xuzhou21 (EHEC)
         eoi  Escherichia coli O111:H- 11128 (EHEC)
         eoj  Escherichia coli O26:H11 11368 (EHEC)
         eoh  Escherichia coli O103:H2 12009 (EHEC)
         ecoo  Escherichia coli O145:H28 RM13514 (EHEC)
         ecoh  Escherichia coli O145:H28 RM13516 (EHEC)
         esl  Escherichia coli O104:H4 2011C-3493 (EAEC)
         eso  Escherichia coli O104:H4 2009EL-2071 (EAEC)
         esm  Escherichia coli O104:H4 2009EL-2050 (EAEC)
         eck  Escherichia coli 55989 (EAEC)
         ecg  Escherichia coli O127:H6 E2348/69 (EPEC)
         eok  Escherichia coli O55:H7 CB9615 (EPEC)
         elr  Escherichia coli O55:H7 RM12579 (EPEC)
         elh  Escherichia coli O78:H11:K80 H10407 (ETEC)
         ecw  Escherichia coli O139:H28 E24377A (ETEC)
         eun  Escherichia coli UMNK88 (ETEC, porcine)
         ecp  Escherichia coli O6:K15:H31 536 (UPEC)
         ena  Escherichia coli NA114 (UPEC)
         ecos  Escherichia coli O25b:K100:H4-ST131 EC958 (UPEC)
         ecv  Escherichia coli APEC O1 (APEC)
         ecoa  Escherichia coli APEC O78 (APEC)
         ecx  Escherichia coli O9 HS (commensal)
         ecm  Escherichia coli SMS-3-5 (environmental)
         ecy  Escherichia coli O152:H28 SE11 (commensal)
         ecr  Escherichia coli O8 IAI1 (commensal)
         ecq  Escherichia coli O81 ED1a (commensal)
         eum  Escherichia coli O17:K52:H18 UMN026 (ExPEC)
         ect  Escherichia coli O7:K1 IAI39 (ExPEC)
         eoc  Escherichia coli O7:K1 CE10
         ebr  Escherichia coli B REL606
         ebl  Escherichia coli BL21(DE3)
         ebe  Escherichia coli BL21(DE3)
         ebd  Escherichia coli BL21-Gold(DE3)pLysS AG
         eci  Escherichia coli O18:K1:H7 UTI89 (UPEC)
         eih  Escherichia coli O18:K1:H7 IHE3034 (ExPEC)
         ecz  Escherichia coli O45:K1:H7 S88 (ExPEC)
         ecc  Escherichia coli O6:K2:H1 CFT073 (UPEC)
         elo  Escherichia coli O44:H18 042 (EAEC)
         eln  Escherichia coli O83:H1 NRG 857C (AIEC)
         ese  Escherichia coli O150:H5 SE15 (commensal)
         ecl  Escherichia coli ATCC 8739
         eko  Escherichia coli KO11FL
         ekf  Escherichia coli KO11FL
         eab  Escherichia coli ABU 83972
         edh  Escherichia coli DH1
         edj  Escherichia coli DH1
         elu  Escherichia coli UM146
         elw  Escherichia coli W
         ell  Escherichia coli W
         elc  Escherichia coli clone D i14
         eld  Escherichia coli clone D i2
         elp  Escherichia coli P12b
         elf  Escherichia coli LF82
         ecol  Escherichia coli LY180
         ecoi  Escherichia coli PMV-1
         ecoj  Escherichia coli JJ1886
         efe  Escherichia fergusonii
         eal  Escherichia albertii
         ema  Escherichia marmotae
         esz  Escherichia sp. E4742
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       Salmonella (54)
         sty  Salmonella enterica subsp. enterica serovar Typhi CT18
         stt  Salmonella enterica subsp. enterica serovar Typhi Ty2
         sex  Salmonella enterica subsp. enterica serovar Typhi P-stx-12
         sent  Salmonella enterica subsp. enterica serovar Typhi Ty21a
         stm  Salmonella enterica subsp. enterica serovar Typhimurium LT2
         seo  Salmonella enterica subsp. enterica serovar Typhimurium 14028S
         sev  Salmonella enterica subsp. enterica serovar Typhimurium D23580
         sey  Salmonella enterica subsp. enterica serovar Typhimurium SL1344
         sem  Salmonella enterica subsp. enterica serovar Typhimurium T000240
         sej  Salmonella enterica subsp. enterica serovar Typhimurium UK-1
         seb  Salmonella enterica subsp. enterica serovar Typhimurium ST4/74
         sef  Salmonella enterica subsp. enterica serovar Typhimurium 798
         setu  Salmonella enterica subsp. enterica serovar Typhimurium U288
         setc  Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921
         senr  Salmonella enterica subsp. enterica serovar Typhimurium DT2
         send  Salmonella enterica subsp. enterica serovar Typhimurium DT104
         seni  Salmonella enterica subsp. enterica serovar Typhimurium 138736
         seen  Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736
         spt  Salmonella enterica subsp. enterica serovar Paratyphi A ATCC9150
         sek  Salmonella enterica subsp. enterica serovar Paratyphi A AKU12601
         spq  Salmonella enterica subsp. enterica serovar Paratyphi B
         sei  Salmonella enterica subsp. enterica serovar Paratyphi C
         sec  Salmonella enterica subsp. enterica serovar Choleraesuis
         seh  Salmonella enterica subsp. enterica serovar Heidelberg SL476
         shb  Salmonella enterica subsp. enterica serovar Heidelberg B182
         senh  Salmonella enterica subsp. enterica serovar Heidelberg CFSAN002069
         seeh  Salmonella enterica subsp. enterica serovar Heidelberg 41578
         see  Salmonella enterica subsp. enterica serovar Newport SL254
         senn  Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1
         sew  Salmonella enterica subsp. enterica serovar Schwarzengrund
         sea  Salmonella enterica subsp. enterica serovar Agona SL483
         sens  Salmonella enterica subsp. enterica serovar Agona 24249
         sed  Salmonella enterica subsp. enterica serovar Dublin
         seg  Salmonella enterica subsp. enterica serovar Gallinarum 287/91
         sel  Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078
         sega  Salmonella enterica subsp. enterica serovar Gallinarum/pullorum CDC1983-67
         set  Salmonella enterica subsp. enterica serovar Enteritidis P125109
         sena  Salmonella enterica subsp. enterica serovar Enteritidis EC20090135
         seno  Salmonella enterica subsp. enterica serovar Enteritidis EC20090193
         senv  Salmonella enterica subsp. enterica serovar Enteritidis EC20090332
         senq  Salmonella enterica subsp. enterica serovar Enteritidis EC20090531
         senl  Salmonella enterica subsp. enterica serovar Enteritidis OLF-SE1-1019-1
         senj  Salmonella enterica subsp. enterica serovar Javiana
         seec  Salmonella enterica subsp. enterica serovar Cubana
         seeb  Salmonella enterica subsp. enterica serovar Bareilly
         seep  Salmonella enterica subsp. enterica serovar Pullorum
         senb  Salmonella enterica subsp. enterica serovar Bovismorbificans
         sene  Salmonella enterica subsp. enterica serovar Thompson
         senc  Salmonella enterica subsp. enterica serovar Tennessee
         ses  Salmonella enterica subsp. arizonae
         sbg  Salmonella bongori NCTC 12419
         sbz  Salmonella bongori N268-08
         sbv  Salmonella bongori serovar 48:z41:--
         salz  Salmonella sp. SSDFZ69
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       Shigella (13)
         sfl  Shigella flexneri 301 (serotype 2a)
         sfx  Shigella flexneri 2457T (serotype 2a)
         sfv  Shigella flexneri 8401 (serotype 5b)
         sfe  Shigella flexneri 2002017 (serotype Fxv)
         sfn  Shigella flexneri 2003036
         sfs  Shigella flexneri Shi06HN006 (serotype Yv)
         sft  Shigella flexneri NCTC1 (serotype 2a)
         ssn  Shigella sonnei Ss046
         sbo  Shigella boydii Sb227 (serotype 4)
         sbc  Shigella boydii CDC 3083-94 (serotype 18)
         sdy  Shigella dysenteriae Sd197
         sdz  Shigella dysenteriae 1617 (serotype 1)
         shq  Shigella sp. PAMC 28760
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       Enterobacter (31)
         enc  Enterobacter cloacae subsp. cloacae ATCC 13047
         eclo  Enterobacter cloacae subsp. cloacae NCTC 9394
         enl  Enterobacter cloacae subsp. dissolvens SDM
         eclg  Enterobacter cloacae GGT036
         ecle  Enterobacter cloacae ECNIH2
         ecln  Enterobacter cloacae ECNIH4
         ecli  Enterobacter cloacae ECNIH5
         eclx  Enterobacter hormaechei subsp. xiangfangensis
         ecly  Enterobacter hormaechei subsp. steigerwaltii
         eclz  Enterobacter hormaechei subsp. hormaechei
         ehm  Enterobacter hormaechei CAV1176
         exf  Enterobacter hormaechei subsp. xiangfangensis
         ecla  Enterobacter hormaechei subsp. hoffmannii ECNIH3
         eclc  Enterobacter hormaechei subsp. hoffmannii ECR091
         eau  Enterobacter asburiae L1
         ekb  Enterobacter kobei DSM 13645
         eno  Enterobacter kobei ENHKU01
         eec  Enterobacter ludwigii EcWSU1
         elg  Enterobacter ludwigii EN-119
         ecan  Enterobacter cancerogenus
         ern  Enterobacter roggenkampii
         ecls  Enterobacter cloacae complex sp. 35734
         echg  Enterobacter chengduensis
         esh  Enterobacter sichuanensis
         ent  Enterobacter sp. 638
         eas  Enterobacter soli
         enr  Enterobacter sp. R4-368
         enx  Enterobacter sp. E20
         enf  Enterobacter sp. FY-07
         ebg  Enterobacter bugandensis
         end  Enterobacter sp. ODB01
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       Cronobacter (11)
         esa  Cronobacter sakazakii ATCC BAA-894
         csk  Cronobacter sakazakii ES15
         csz  Cronobacter sakazakii Sp291
         csj  Cronobacter sakazakii ATCC 29544
         ccon  Cronobacter condimenti
         cdm  Cronobacter dublinensis
         csi  Cronobacter malonaticus CMCC45402
         cmj  Cronobacter malonaticus LMG 23826
         cui  Cronobacter universalis
         cmw  Cronobacter muytjensii
         ctu  Cronobacter turicensis
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       Klebsiella (42)
         kpn  Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (serotype K52)
         kpu  Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 (serotype K1)
         kpm  Klebsiella pneumoniae subsp. pneumoniae HS11286
         kpp  Klebsiella pneumoniae subsp. pneumoniae 1084 (serotype K1)
         kph  Klebsiella pneumoniae subsp. pneumoniae KPNIH24
         kpz  Klebsiella pneumoniae subsp. pneumoniae KPNIH27
         kpv  Klebsiella pneumoniae subsp. pneumoniae KPNIH29
         kpw  Klebsiella pneumoniae subsp. pneumoniae KPNIH30
         kpy  Klebsiella pneumoniae subsp. pneumoniae KPNIH31
         kpg  Klebsiella pneumoniae subsp. pneumoniae KPNIH32
         kpc  Klebsiella pneumoniae subsp. pneumoniae KPNIH10
         kpq  Klebsiella pneumoniae subsp. pneumoniae KPR0928
         kpt  Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 KPPR1
         kpo  Klebsiella pneumoniae KCTC 2242
         kpr  Klebsiella pneumoniae subsp. rhinoscleromatis SB3432
         kpj  Klebsiella pneumoniae JM45
         kpi  Klebsiella pneumoniae CG43
         kpa  Klebsiella pneumoniae 30660/NJST258_1
         kps  Klebsiella pneumoniae 30684/NJST258_2
         kpx  Klebsiella pneumoniae PMK1
         kpb  Klebsiella pneumoniae blaNDM-1
         kpne  Klebsiella pneumoniae 32192
         kpnu  Klebsiella pneumoniae 34618
         kpnk  Klebsiella pneumoniae Kp52.145
         kva  Klebsiella variicola At-22
         kpe  Klebsiella variicola 342
         kpk  Klebsiella variicola KP5-1
         kvd  Klebsiella variicola DX120E
         kvq  Klebsiella variicola DSM 15968
         kox  Klebsiella michiganensis KCTC 1686
         koe  Klebsiella michiganensis E718
         koy  Klebsiella michiganensis HKOPL1
         kom  Klebsiella michiganensis M1
         kmi  Klebsiella michiganensis RC10
         kok  Klebsiella oxytoca KONIH1
         koc  Klebsiella oxytoca CAV1374
         kqu  Klebsiella quasipneumoniae
         eae  Klebsiella aerogenes KCTC 2190
         ear  Klebsiella aerogenes EA1509E
         kqv  Klebsiella quasivariicola
         kll  Klebsiella sp. LTGPAF-6F
         klw  Klebsiella huaxiensis
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       Citrobacter (15)
         cro  Citrobacter rodentium
         cko  Citrobacter koseri
         cfd  Citrobacter freundii
         cbra  Citrobacter braakii
         cwe  Citrobacter werkmanii
         cyo  Citrobacter youngae
         cpot  Citrobacter portucalensis
         cfq  Citrobacter freundii complex sp. CFNIH3
         cama  Citrobacter amalonaticus Y19
         caf  Citrobacter amalonaticus FDAARGOS_165
         cif  Citrobacter sp. FDAARGOS_156
         cfar  Citrobacter farmeri
         cir  Citrobacter sp. CFNIH10
         cie  Citrobacter sp. CRE-46
         cpar  Citrobacter pasteurii
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       Gibbsiella (1)
         gqu  Gibbsiella quercinecans
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       Blochmannia (6)
       Hamiltonella (1)
       Unclassified aphid symbionts (2)
       Unclassified mealybug symbionts (1)
       Riesia (2)
       Moranella (2)
       Shimwellia (1)
         ebt  Shimwellia blattae
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       Raoultella (6)
         ror  Raoultella ornithinolytica B6
         ron  Raoultella ornithinolytica S12
         rpln  Raoultella planticola
         rao  Raoultella sp. X13
         rtg  Raoultella terrigena
         ree  Raoultella electrica
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       Cedecea (4)
         cnt  Cedecea neteri SSMD04
         cem  Cedecea neteri M006
         cen  Cedecea neteri ND14a
         clap  Cedecea lapagei
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       Pluralibacter (3)
         pge  Pluralibacter gergoviae
         esc  Enterobacter lignolyticus SCF1
         kle  Enterobacter lignolyticus G5
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       Kosakonia (5)
         ksa  Kosakonia sacchari
         kor  Kosakonia oryzae
         krd  Kosakonia radicincitans
         kco  Kosakonia cowanii
         kot  Kosakonia sp. CCTCC M2018092
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       Kluyvera (2)
         kgo  Kluyvera georgiana
         kie  Kluyvera intermedia
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       Ishikawaella (1)
       Leclercia (6)
         lax  Leclercia adecarboxylata
         lei  Leclercia sp. LSNIH1
         leh  Leclercia sp. LSNIH3
         lee  Leclercia sp. W17
         ler  Leclercia sp. 1106151
         lea  Leclercia sp. J807
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       Lelliottia (4)
         laz  Lelliottia amnigena
         lef  Lelliottia jeotgali
         lni  Lelliottia nimipressuralis
         lew  Lelliottia sp. WB101
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       Limnobaculum (1)
         lpv  Limnobaculum parvum
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       Buttiauxella (1)
         buf  Buttiauxella sp. 3AFRM03
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       Tachikawaea (1)
       Doolittlea (1)
       Hoaglandella (1)
       Gullanella (1)
       Mikella (1)
       Purcelliella (1)
       Metakosakonia (1)
         mety  Metakosakonia sp. MRY16-398
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       Atlantibacter (1)
         ahn  Atlantibacter hermannii
  3/307
       Izhakiella (1)
         izh  Izhakiella sp. KSNA2
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       Yokenella (1)
         yre  Yokenella regensburgei
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       Scandinavium (1)
       Unclassified Enterobacteria (4)
         ebf  Enterobacteriaceae bacterium FGI 57
         ebc  Enterobacteriaceae bacterium ENNIH2
         ebu  Enterobacteriaceae bacterium S05
         psts  Plautia stali symbiont
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       Yersinia (46)
         ype  Yersinia pestis CO92 (biovar Orientalis)
         ypk  Yersinia pestis KIM10+ (biovar Mediaevalis)
         yph  Yersinia pestis Harbin 35 (biovar Medievalis)
         ypa  Yersinia pestis Antiqua (biovar Antiqua)
         ypn  Yersinia pestis Nepal516 (biovar Antiqua)
         ypm  Yersinia pestis 91001 (biovar Microtus)
         ypp  Yersinia pestis Pestoides F (biovar Antiqua)
         ypg  Yersinia pestis Angola
         ypz  Yersinia pestis Z176003
         ypt  Yersinia pestis A1122
         ypd  Yersinia pestis D106004
         ypx  Yersinia pestis D182038
         ypw  Yersinia pestis PBM19
         ypj  Yersinia pestis Harbin35
         ypv  Yersinia pestis Shasta
         ypl  Yersinia pestis El Dorado
         yps  Yersinia pseudotuberculosis IP 32953 (serotype I)
         ypo  Yersinia pseudotuberculosis IP 32953 (serotype 1)
         ypi  Yersinia pseudotuberculosis IP 31758 (serotype O:1b)
         ypy  Yersinia pseudotuberculosis YPIII (serotype O:3)
         ypb  Yersinia pseudotuberculosis PB1/+ (serotype 1B)
         ypq  Yersinia pseudotuberculosis ATCC 6904
         ypu  Yersinia pseudotuberculosis MD67
         ypr  Yersinia pseudotuberculosis EP2/+
         ypc  Yersinia pseudotuberculosis 1
         ypf  Yersinia pseudotuberculosis PA3606
         yen  Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0:8)
         yep  Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
         yey  Yersinia enterocolitica subsp. palearctica Y11 (serotype:0:3)
         yel  Yersinia enterocolitica LC20
         yew  Yersinia enterocolitica WA
         yet  Yersinia enterocolitica 2516-87
         yef  Yersinia enterocolitica FORC_002
         yee  Yersinia enterocolitica (type O:5) YE53/03
         ysi  Yersinia similis
         yal  Yersinia aldovae
         yfr  Yersinia frederiksenii
         yin  Yersinia intermedia
         ykr  Yersinia kristensenii
         yro  Yersinia rohdei
         yru  Yersinia ruckeri YRB
         yrb  Yersinia ruckeri Big Creek 74 (serotype O2)
         yak  Yersinia aleksiciae
         yma  Yersinia massiliensis
         yhi  Yersinia hibernica
         yca  Yersinia canariae
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       Serratia (24)
         smar  Serratia marcescens SM39
         smac  Serratia marcescens subsp. marcescens Db11
         smw  Serratia marcescens WW4
         spe  Serratia proteamaculans
         srr  Serratia plymuthica AS9
         srl  Serratia plymuthica 4Rx13
         sry  Serratia plymuthica S13
         sply  Serratia plymuthica PRI-2C
         srs  Serratia sp. AS12
         sra  Serratia sp. AS13
         smaf  Serratia sp. FGI94
         slq  Serratia liquefaciens
         serf  Serratia sp. FS14
         sers  Serratia sp. SCBI
         sfw  Serratia fonticola DSM 4576
         sfg  Serratia fonticola GS2
         srz  Serratia rubidaea
         sera  Serratia sp. ATCC 39006
         serq  Serratia sp. ATCC 39006
         serm  Serratia sp. MYb239
         squ  Serratia quinivorans
         sfj  Serratia ficaria
         sof  Serratia odorifera
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       Chania (1)
         sfo  Chania multitudinisentens
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       Rahnella (4)
         rah  Rahnella sp. Y9602
         raq  Rahnella aquatilis CIP 78.65 = ATCC 33071
         raa  Rahnella aquatilis HX2
         rox  Rahnella sp. ERMR1:05
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       Fukatsuia (1)
       Pectobacterium (13)
         eca  Pectobacterium atrosepticum SCRI1043
         patr  Pectobacterium atrosepticum JG10-08
         pato  Pectobacterium atrosepticum 21A
         pct  Pectobacterium carotovorum subsp. carotovorum PC1
         pcc  Pectobacterium carotovorum subsp. carotovorum PCC21
         pcv  Pectobacterium odoriferum
         pwa  Pectobacterium parmentieri WPP163
         ppar  Pectobacterium parmentieri RNS08.42.1A
         pec  Pectobacterium parmentieri SCC3193
         pws  Pectobacterium wasabiae
         ppoa  Pectobacterium polaris
         pbra  Pectobacterium brasiliense
         ppuj  Pectobacterium punjabense
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       Sodalis (4)
         sod  Sodalis praecaptivus
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       Dickeya (11)
         ddd  Dickeya dadantii 3937
         dda  Dickeya paradisiaca
         dze  Dickeya chrysanthemi
         ddc  Dickeya zeae Ech586
         dzc  Dickeya zeae EC1
         dso  Dickeya solani IPO 2222
         ced  Dickeya fangzhongdai ND14b
         dfn  Dickeya fangzhongdai DSM 101947
         ddq  Dickeya dianthicola
         daq  Dickeya aquatica
         dic  Dickeya sp. NCPPB 569
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       Brenneria (3)
         bgj  Brenneria goodwinii
         brb  Brenneria rubrifaciens
         bng  Brenneria nigrifluens
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       Lonsdalea (1)
         lbq  Lonsdalea britannica
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       Erwinia (11)
         eam  Erwinia amylovora CFBP1430
         eay  Erwinia amylovora ATCC 49946
         eta  Erwinia tasmaniensis
         epy  Erwinia pyrifoliae Ep1/96
         epr  Erwinia pyrifoliae DSM 12163
         ebi  Erwinia billingiae
         erj  Erwinia sp. Ejp617
         ege  Erwinia gerundensis
         epe  Erwinia persicina
         erwi  Erwinia sp. J780
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       Buchnera (18)
       Wigglesworthia (2)
       Pantoea (17)
         pam  Pantoea ananatis LMG 20103
         plf  Pantoea ananatis LMG 5342
         paj  Pantoea ananatis AJ13355
         paq  Pantoea ananatis PA13
         pva  Pantoea vagans C9-1
         pagg  Pantoea vagans FDAARGOS_160
         pao  Pantoea sp. At-9b
         kln  Pantoea rwandensis
         pant  Pantoea sp. PSNIH1
         panp  Pantoea sp. PSNIH2
         pagc  Pantoea agglomerans C410P1
         pstw  Pantoea stewartii subsp. stewartii
         palh  Pantoea alhagi
         pans  Pantoea sp. SO10
         pey  Pantoea eucalypti
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       Mixta (4)
         pgz  Mixta gaviniae
         pcd  Mixta calida
         mint  Mixta intestinalis
         mthi  Mixta theicola
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       Tatumella (2)
         tci  Tatumella citrea
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       Photorhabdus (4)
         plu  Photorhabdus laumondii subsp. laumondii TTO1
         plum  Photorhabdus laumondii subsp. laumondii DSPV002N
         pay  Photorhabdus asymbiotica
         ptt  Photorhabdus thracensis
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       Proteus (8)
         pmr  Proteus mirabilis HI4320
         pmib  Proteus mirabilis BB2000
         pvl  Proteus mirabilis CYPV1
         pvg  Proteus vulgaris
         phau  Proteus hauseri
         prot  Proteus sp. CD3
         pcib  Proteus cibarius
         pcol  Proteus columbae
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       Xenorhabdus (7)
         xbo  Xenorhabdus bovienii SS-2004
         xbv  Xenorhabdus bovienii CS03
         xne  Xenorhabdus nematophila ATCC 19061
         xnm  Xenorhabdus nematophila AN6/1
         xdo  Xenorhabdus doucetiae
         xpo  Xenorhabdus poinarii
         xho  Xenorhabdus hominickii
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       Providencia (9)
         psi  Providencia stuartii MRSN 2154
         psx  Providencia stuartii ATCC 33672
         psta  Providencia stuartii BE2467
         prg  Providencia rettgeri
         pala  Providencia alcalifaciens
         phei  Providencia heimbachae
         prq  Providencia sp. WCHPHu000369
         prj  Providencia rustigianii
         pvc  Providencia vermicola
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       Morganella (1)
         mmk  Morganella morganii
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       Arsenophonus (3)
       Edwardsiella (8)
         eic  Edwardsiella ictaluri
         etr  Edwardsiella tarda EIB202
         etd  Edwardsiella tarda FL6-60
         ete  Edwardsiella anguillarum
         etc  Edwardsiella piscicida C07-087
         edw  Edwardsiella sp. EA181011
         edl  Edwardsiella sp. LADL05-105
         eho  Edwardsiella hoshinae
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       Hafnia (2)
         hav  Hafnia alvei
         hpar  Hafnia paralvei
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       Obesumbacterium (1)
         opo  Obesumbacterium proteus
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       Pragia (2)
         pfq  Pragia fontium
         prag  Pragia sp. CF-458
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       Leminorella (1)
         lri  Leminorella richardii
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       Phytobacter (2)
         kin  Phytobacter ursingii
         pdz  Phytobacter diazotrophicus
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       Plesiomonas (1)
         pshi  Plesiomonas shigelloides
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     Gammaproteobacteria - Others (837)
       Haemophilus (22)
         hin  Haemophilus influenzae Rd KW20 (serotype d)
         hit  Haemophilus influenzae 86-028NP (nontypeable)
         hip  Haemophilus influenzae PittEE (nontypeable)
         hif  Haemophilus influenzae F3031 (nontypeable)
         hiu  Haemophilus influenzae 10810 (serotype b)
         hie  Haemophilus influenzae R2846 (nontypeable)
         hiz  Haemophilus influenzae R2866 (nontypeable)
         hik  Haemophilus influenzae KR494 (serotype f)
         hia  Haemophilus influenzae CGSHiCZ412602
         hih  Haemophilus influenzae Hi375
         hiw  Haemophilus influenzae 477
         hic  Haemophilus influenzae C486
         hix  Haemophilus influenzae 723
         hpr  Haemophilus parainfluenzae
         hay  Haemophilus sp. oral taxon 036
         hpit  Haemophilus pittmaniae
         hhz  Haemophilus haemolyticus
         haeg  Haemophilus aegyptius
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       Glaesserella (5)
         gle  Glaesserella sp. 15-184
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       Histophilus (2)
       Pasteurella (7)
         pmu  Pasteurella multocida subsp. multocida Pm70
         pmv  Pasteurella multocida subsp. multocida HN06
         pul  Pasteurella multocida subsp. multocida 3480
         pmp  Pasteurella multocida 36950
         pmul  Pasteurella multocida ATCC 43137
         pdag  Pasteurella dagmatis
         paet  Pasteurella aerogenes
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       Basfia (2)
         msu  Mannheimia succiniciproducens
         bsun  Basfia succiniciproducens
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       Mannheimia (15)
       Actinobacillus (10)
         asu  Actinobacillus succinogenes
         aio  Actinobacillus indolicus
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       Aggregatibacter (9)
         aap  Aggregatibacter aphrophilus NJ8700
         aaz  Aggregatibacter aphrophilus W10433
         aao  Aggregatibacter actinomycetemcomitans ANH9381
         aan  Aggregatibacter actinomycetemcomitans D7S-1
         aah  Aggregatibacter actinomycetemcomitans HK1651
         aacn  Aggregatibacter actinomycetemcomitans NUM4039
         aact  Aggregatibacter actinomycetemcomitans 624
         aseg  Aggregatibacter segnis
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       Gallibacterium (1)
         gan  Gallibacterium anatis
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       Bibersteinia (4)
         bto  Bibersteinia trehalosi USDA-ARS-USMARC-192
         btre  Bibersteinia trehalosi USDA-ARS-USMARC-188
         btrh  Bibersteinia trehalosi USDA-ARS-USMARC-189
         btra  Bibersteinia trehalosi USDA-ARS-USMARC-190
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       Avibacterium (2)
         avt  Avibacterium volantium
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       Rodentibacter (2)
         rpne  Rodentibacter pneumotropicus
         rhey  Rodentibacter heylii
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       Otariodibacter (1)
       Frederiksenia (1)
         fcl  Frederiksenia canicola
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       Xylella (9)
       Xanthomonas (38)
         xcc  Xanthomonas campestris pv. campestris ATCC 33913
         xcb  Xanthomonas campestris pv. campestris 8004
         xca  Xanthomonas campestris pv. campestris B100
         xcp  Xanthomonas campestris pv. raphani
         xcv  Xanthomonas campestris pv. vesicatoria
         xax  Xanthomonas axonopodis pv. citrumelo F1
         xac  Xanthomonas citri pv. citri 306
         xci  Xanthomonas citri subsp. citri Aw12879
         xct  Xanthomonas citri subsp. citri A306
         xcj  Xanthomonas citri subsp. citri UI6
         xcu  Xanthomonas citri pv. citri UI7
         xcn  Xanthomonas citri pv. citri NT17
         xcw  Xanthomonas citri pv. citri MN10
         xcr  Xanthomonas citri pv. citri MN11
         xcm  Xanthomonas citri pv. citri MN12
         xcf  Xanthomonas citri pv. citri mf20
         xfu  Xanthomonas citri pv. fuscans
         xao  Xanthomonas axonopodis Xac29-1
         xom  Xanthomonas oryzae pv. oryzae MAFF 311018
         xoo  Xanthomonas oryzae pv. oryzae KACC 10331
         xop  Xanthomonas oryzae pv. oryzae PXO99A
         xoy  Xanthomonas oryzae pv. oryzae PXO86
         xor  Xanthomonas oryzae pv. oryzicola BLS256
         xoz  Xanthomonas oryzae pv. oryzicola CFBP7342
         xal  Xanthomonas albilineans
         xsa  Xanthomonas sacchari
         xtn  Xanthomonas translucens
         xfr  Xanthomonas fragariae
         xga  Xanthomonas gardneri
         xve  Xanthomonas vesicatoria
         xpe  Xanthomonas perforans
         xhr  Xanthomonas hortorum
         xph  Xanthomonas phaseoli
         xva  Xanthomonas vasicola
         xan  Xanthomonas sp. ISO98C4
         xar  Xanthomonas arboricola
         xhy  Xanthomonas hyacinthi
         xcz  Xanthomonas cucurbitae
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       Stenotrophomonas (11)
         sml  Stenotrophomonas maltophilia K279a
         smt  Stenotrophomonas maltophilia R551-3
         buj  Stenotrophomonas maltophilia JV3
         smz  Stenotrophomonas maltophilia D457
         sacz  Stenotrophomonas acidaminiphila
         stek  Stenotrophomonas sp. KCTC 12332
         srh  Stenotrophomonas rhizophila
         slm  Stenotrophomonas sp. LM091
         sten  Stenotrophomonas sp. WZN-1
         stem  Stenotrophomonas sp. MYb57
         stes  Stenotrophomonas sp. ASS1
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       Pseudoxanthomonas (3)
         psu  Pseudoxanthomonas suwonensis 11-1
         psuw  Pseudoxanthomonas suwonensis J1
         psd  Pseudoxanthomonas spadix
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       Lysobacter (11)
         lab  Lysobacter antibioticus 76
         laq  Lysobacter antibioticus ATCC 29479
         lcp  Lysobacter capsici
         lgu  Lysobacter gummosus
         lez  Lysobacter enzymogenes C3
         lem  Lysobacter enzymogenes M497-1
         lmb  Lysobacter maris
         lyt  Lysobacter sp. TY2-98
         lue  Lysobacter oculi
         lyj  Lysobacter sp. SJ-36
         lsol  Lysobacter soli
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       Luteimonas (3)
         lum  Luteimonas sp. 100111
         lus  Luteimonas yindakuii
         lug  Luteimonas sp. Gr-4
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       Thermomonas (2)
         thes  Thermomonas sp. SY21
         theh  Thermomonas sp. HDW16
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       Pseudolysobacter (1)
         xbc  Pseudolysobacter antarcticus
 10/307
       Frateuria (1)
         fau  Frateuria aurantia
 10/307
       Rhodanobacter (2)
         rhd  Rhodanobacter denitrificans
         rgl  Rhodanobacter glycinis
 10/307
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       Dyella (4)
         dji  Dyella jiangningensis
         dja  Dyella japonica
         dtx  Dyella thiooxydans
         dye  Dyella sp. M7H15-1
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       Dokdonella (1)
         dko  Dokdonella koreensis
 10/307
       Luteibacter (2)
         lrz  Luteibacter rhizovicinus DSM 16549
         lpy  Luteibacter pinisoli
 10/307
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       Ahniella (1)
         xba  Ahniella affigens
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       Aerosticca (1)
         rbd  Aerosticca soli
 10/307
       Vibrio (53)
         vch  Vibrio cholerae O1 El Tor N16961
         vcf  Vibrio cholerae O1 El Tor FJ147
         vcs  Vibrio cholerae O1 El Tor MS6
         vce  Vibrio cholerae O1 2010EL-1786
         vcq  Vibrio cholerae O1 2012EL-2176
         vcj  Vibrio cholerae O1 MJ-1236
         vci  Vibrio cholerae O1 IEC224
         vco  Vibrio cholerae O1 O395
         vcr  Vibrio cholerae O1 O395
         vcm  Vibrio cholerae O1 M66-2
         vcl  Vibrio cholerae O1 LMA3984-4
         vcx  Vibrio cholerae O49 1154-74
         vcz  Vibrio cholerae O27 10432-62
         vvu  Vibrio vulnificus CMCP6
         vvy  Vibrio vulnificus YJ016
         vvm  Vibrio vulnificus MO6-24/O
         vvl  Vibrio vulnificus 93U204
         vpa  Vibrio parahaemolyticus RIMD 2210633
         vpb  Vibrio parahaemolyticus BB22OP
         vpk  Vibrio parahaemolyticus O1:K33 CDC_K4557
         vpf  Vibrio parahaemolyticus O1:Kuk FDA_R31
         vph  Vibrio parahaemolyticus UCM-V493
         vha  Vibrio campbellii
         vca  Vibrio campbellii
         vag  Vibrio alginolyticus
         vex  Vibrio antiquarius
         vdb  Vibrio diabolicus
         vhr  Vibrio harveyi
         vna  Vibrio natriegens
         vow  Vibrio owensii
         vro  Vibrio rotiferianus
         vsp  Vibrio tasmaniensis
         vej  Vibrio sp. EJY3
         vfu  Vibrio furnissii
         vni  Vibrio nigripulchritudo
         van  Vibrio anguillarum 775
         lag  Vibrio anguillarum M3
         vau  Vibrio anguillarum NB10
         vcy  Vibrio coralliilyticus RE98
         vct  Vibrio coralliilyticus OCN014
         vtu  Vibrio tubiashii
         vfl  Vibrio fluvialis
         vmi  Vibrio mimicus
         vbr  Vibrio breoganii
         vsc  Vibrio scophthalmi
         vga  Vibrio gazogenes
         vsh  Vibrio mediterranei
         vqi  Vibrio qinghaiensis
         vta  Vibrio tapetis
         vaf  Vibrio alfacsensis
         vnl  Vibrio neocaledonicus
         vcc  Vibrio cyclitrophicus
         vas  Vibrio astriarenae
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       Aliivibrio (4)
         vfi  Aliivibrio fischeri ES114
         vfm  Aliivibrio fischeri MJ11
         vsa  Aliivibrio salmonicida
         awd  Aliivibrio wodanis
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       Photobacterium (3)
         ppr  Photobacterium profundum
         pgb  Photobacterium gaetbulicola
         pds  Photobacterium damselae subsp. damselae
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       Grimontia (1)
         gho  Grimontia hollisae
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       Paraphotobacterium (1)
         pmai  Paraphotobacterium marinum
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       Salinivibrio (3)
         saly  Salinivibrio sp. YCSC6
         sks  Salinivibrio kushneri
         scot  Salinivibrio costicola
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       Pseudomonas (114)
         pae  Pseudomonas aeruginosa PAO1
         paev  Pseudomonas aeruginosa PAO1-VE13
         paei  Pseudomonas aeruginosa PAO1-VE2
         pau  Pseudomonas aeruginosa UCBPP-PA14
         pap  Pseudomonas aeruginosa PA7
         pag  Pseudomonas aeruginosa LESB58
         paf  Pseudomonas aeruginosa M18
         pnc  Pseudomonas aeruginosa NCGM2.S1
         paeb  Pseudomonas aeruginosa NCGM 1900
         pdk  Pseudomonas aeruginosa DK2
         psg  Pseudomonas aeruginosa B136-33
         prp  Pseudomonas aeruginosa RP73
         paep  Pseudomonas aeruginosa PA1
         paer  Pseudomonas aeruginosa PA1R
         paem  Pseudomonas aeruginosa MTB-1
         pael  Pseudomonas aeruginosa LES431
         paes  Pseudomonas aeruginosa SCV20265
         paeu  Pseudomonas aeruginosa PA38182
         paeg  Pseudomonas aeruginosa YL84
         paec  Pseudomonas aeruginosa c7447m
         paeo  Pseudomonas aeruginosa PAO581
         pmy  Pseudomonas mendocina ymp
         pmk  Pseudomonas mendocina NK-01
         pre  Pseudomonas resinovorans
         ppse  Pseudomonas pseudoalcaligenes
         palc  Pseudomonas alcaligenes
         pcq  Pseudomonas citronellolis
         ppu  Pseudomonas putida KT2440
         ppf  Pseudomonas putida F1
         ppg  Pseudomonas putida GB-1
         ppw  Pseudomonas putida W619
         ppt  Pseudomonas putida S16
         ppb  Pseudomonas putida BIRD-1
         ppi  Pseudomonas putida ND6
         ppx  Pseudomonas putida DOT-T1E
         ppuh  Pseudomonas putida HB3267
         pput  Pseudomonas putida H8234
         ppun  Pseudomonas putida NBRC 14164
         ppud  Pseudomonas putida DLL-E4
         pfv  Pseudomonas fulva
         pmon  Pseudomonas monteilii SB3078
         pmot  Pseudomonas monteilii SB3101
         pmos  Pseudomonas soli
         ppj  Pseudomonas plecoglossicida
         por  Pseudomonas oryzihabitans
         pst  Pseudomonas syringae pv. tomato DC3000
         psb  Pseudomonas syringae pv. syringae B728a
         psyr  Pseudomonas syringae CC1557
         psp  Pseudomonas savastanoi pv. phaseolicola 1448A
         pamg  Pseudomonas amygdali
         pci  Pseudomonas cichorii
         pavl  Pseudomonas avellanae
         pvd  Pseudomonas viridiflava
         pfl  Pseudomonas protegens Pf-5
         pprc  Pseudomonas protegens CHA0
         ppro  Pseudomonas protegens Cab57
         pfo  Pseudomonas fluorescens Pf0-1
         pfs  Pseudomonas fluorescens SBW25
         pfe  Pseudomonas fluorescens F113
         pfc  Pseudomonas fluorescens A506
         pfn  Pseudomonas fluorescens UK4
         ppz  Pseudomonas poae
         pfb  Pseudomonas synxantha LBUM223
         pman  Pseudomonas mandelii
         ptv  Pseudomonas trivialis
         pcg  Pseudomonas corrugata
         pvr  Pseudomonas veronii
         pazo  Pseudomonas azotoformans
         poi  Pseudomonas orientalis
         pfw  Pseudomonas simiae PCL1751
         pff  Pseudomonas simiae PICF7
         pfx  Pseudomonas lurida
         pen  Pseudomonas entomophila
         psa  Pseudomonas stutzeri A1501
         psz  Pseudomonas stutzeri ATCC 17588
         psr  Pseudomonas stutzeri DSM 4166
         psc  Pseudomonas stutzeri CCUG 29243
         psj  Pseudomonas stutzeri DSM 10701
         psh  Pseudomonas stutzeri RCH2
         pstu  Pseudomonas stutzeri 19SMN4
         pstt  Pseudomonas stutzeri 28a24
         pbm  Pseudomonas balearica
         plul  Pseudomonas luteola
         pba  Pseudomonas brassicacearum subsp. brassicacearum NFM421
         pbc  Pseudomonas brassicacearum DF41
         ppuu  Pseudomonas sp. UW4
         pdr  Pseudomonas sp. ATCC 13867
         psv  Pseudomonas sp. VLB120
         psk  Pseudomonas sp. TKP
         pkc  Pseudomonas knackmussii
         pch  Pseudomonas chlororaphis PA23
         pcz  Pseudomonas chlororaphis PCL1606
         pcp  Pseudomonas chlororaphis subsp. aurantiaca
         pfz  Pseudomonas fragi
         plq  Psychrobacter sp. FME2
         palk  Pseudomonas alkylphenolica
         prh  Pseudomonas rhizosphaerae
         psw  Pseudomonas cremoricolorata
         ppv  Pseudomonas parafulva
         pses  Pseudomonas sp. StFLB209
         psem  Pseudomonas sp. MRSN12121
         psec  Pseudomonas sp. CCOS 191
         ppsy  Pseudomonas versuta
         psos  Pseudomonas sp. Os17
         pkr  Pseudomonas koreensis
         pfk  Pseudomonas frederiksbergensis
         panr  Pseudomonas antarctica
         ppsl  Pseudomonas psychrotolerans
         pset  Pseudomonas sp. TCU-HL1
         psil  Pseudomonas silesiensis
         pym  Pseudomonas yamanorum
         psed  Pseudomonas sp. R2A2
         pke  Pseudomonas kribbensis
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       Azotobacter (4)
         avn  Azotobacter vinelandii DJ
         avl  Azotobacter vinelandii CA
         avd  Azotobacter vinelandii CA6
         acx  Azotobacter chroococcum
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       Oblitimonas (1)
         pbb  Oblitimonas alkaliphila
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       Permianibacter (1)
         pagr  Permianibacter aggregans
 13/307
       Psychrobacter (12)
         par  Psychrobacter arcticus
         pcr  Psychrobacter cryohalolentis
         prw  Psychrobacter sp. PRwf-1
         pso  Psychrobacter sp. G
         pur  Psychrobacter urativorans
         pali  Psychrobacter alimentarius
         pspg  Psychrobacter sp. P2G3
         psyg  Psychrobacter sp. P11G5
         psyc  Psychrobacter sp. DAB_AL43B
         psya  Psychrobacter sp. AntiMn-1
         psyy  Psychrobacter sp. YP14
         psyp  Psychrobacter sp. PAMC27889
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       Acinetobacter (47)
         acb  Acinetobacter baumannii ATCC 17978
         abm  Acinetobacter baumannii SDF
         aby  Acinetobacter baumannii AYE
         abc  Acinetobacter baumannii ACICU
         abn  Acinetobacter baumannii AB0057
         abb  Acinetobacter baumannii AB307-0294
         abx  Acinetobacter baumannii 1656-2
         abz  Acinetobacter baumannii MDR-ZJ06
         abr  Acinetobacter baumannii MDR-TJ
         abd  Acinetobacter baumannii TCDC-AB0715
         abh  Acinetobacter baumannii TYTH-1
         abad  Acinetobacter baumannii D1279779
         abj  Acinetobacter baumannii BJAB07104
         abab  Acinetobacter baumannii BJAB0715
         abaj  Acinetobacter baumannii BJAB0868
         abaz  Acinetobacter baumannii ZW85-1
         abk  Acinetobacter baumannii AbH12O-A2
         abau  Acinetobacter baumannii AB030
         abaa  Acinetobacter baumannii AB031
         abw  Acinetobacter baumannii AC29
         abal  Acinetobacter baumannii LAC-4
         acc  Acinetobacter pittii
         ano  Acinetobacter nosocomialis
         alc  Acinetobacter lactucae
         acal  Acinetobacter calcoaceticus
         acd  Acinetobacter oleivorans
         aci  Acinetobacter baylyi
         att  Acinetobacter sp. TTH0-4
         aei  Acinetobacter equi
         ajo  Acinetobacter johnsonii
         acw  Acinetobacter sp. DUT-2
         acv  Acinetobacter sp. TGL-Y2
         ahl  Acinetobacter haemolyticus
         ajn  Acinetobacter junii
         asol  Acinetobacter soli
         ala  Acinetobacter larvae
         asj  Acinetobacter schindleri
         aid  Acinetobacter indicus
         adv  Acinetobacter defluvii
         arj  Acinetobacter radioresistens
         awu  Acinetobacter wuhouensis
         acum  Acinetobacter cumulans
         agu  Acinetobacter guillouiae
         aug  Acinetobacter ursingii
         alw  Acinetobacter lwoffii
         ads  Acinetobacter dispersus
         aber  Acinetobacter bereziniae
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       Moraxella (8)
         mct  Moraxella catarrhalis BBH18
         mcs  Moraxella catarrhalis 25240
         mcat  Moraxella catarrhalis 25239
         moi  Moraxella ovis
         mos  Moraxella osloensis
         mbl  Moraxella bovoculi
         mboi  Moraxella bovis
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       Unclassified Moraxellaceae (1)
         mbah  Moraxellaceae bacterium HYN0046
 11/307
       Shewanella (34)
         son  Shewanella oneidensis
         sdn  Shewanella denitrificans
         sfr  Shewanella frigidimarina
         saz  Shewanella amazonensis
         sbl  Shewanella baltica OS155
         sbm  Shewanella baltica OS185
         sbn  Shewanella baltica OS195
         sbp  Shewanella baltica OS223
         sbt  Shewanella baltica OS678
         sbs  Shewanella baltica OS117
         sbb  Shewanella baltica BA175
         slo  Shewanella loihica
         spc  Shewanella putrefaciens CN-32
         shp  Shewanella putrefaciens 200
         sse  Shewanella sediminis
         spl  Shewanella pealeana
         she  Shewanella sp. MR-4
         shm  Shewanella sp. MR-7
         shn  Shewanella sp. ANA-3
         shw  Shewanella sp. W3-18-1
         shl  Shewanella halifaxensis
         swd  Shewanella woodyi
         swp  Shewanella piezotolerans
         svo  Shewanella violacea
         shf  Shewanella sp. FDAARGOS_354
         sja  Shewanella japonica
         spsw  Shewanella psychrophila
         sbj  Shewanella bicestrii
         smav  Shewanella marisflavi
         shew  Shewanella sp. WE21
         salg  Shewanella algae
         slj  Shewanella livingstonensis
         smai  Shewanella maritima
         spol  Shewanella polaris
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       Idiomarina (5)
         ilo  Idiomarina loihiensis L2TR
         ili  Idiomarina loihiensis GSL 199
         ipi  Idiomarina piscisalsi
         idi  Idiomarina sp. X4
         idt  Idiomarina sp. OT37-5b
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       Colwellia (7)
         cps  Colwellia psychrerythraea
         com  Colwellia sp. MT41
         coz  Colwellia sp. PAMC 20917
         colw  Colwellia sp. PAMC 21821
         cola  Colwellia sp. Arc7-D
         cber  Colwellia beringensis
         cov  Colwellia sp. Arc7-635
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       Litorilituus (1)
         lsd  Litorilituus sediminis
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       Thalassotalea (2)
         tht  Thalassotalea sp. HSM 43
         thap  Thalassotalea sp. PS06
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       Pseudoalteromonas (23)
         pha  Pseudoalteromonas haloplanktis
         pat  Pseudoalteromonas atlantica
         psm  Pseudoalteromonas sp. SM9913
         pseo  Pseudoalteromonas piratica OCN003
         pia  Pseudoalteromonas issachenkonii
         pphe  Pseudoalteromonas phenolica
         pbw  Pseudoalteromonas sp. Bsw20308
         prr  Pseudoalteromonas rubra
         ptn  Pseudoalteromonas translucida
         plz  Pseudoalteromonas luteoviolacea
         paln  Pseudoalteromonas aliena
         ppis  Pseudoalteromonas piscicida
         pea  Pseudoalteromonas espejiana
         pspo  Pseudoalteromonas spongiae
         part  Pseudoalteromonas arctica
         ptu  Pseudoalteromonas tunicata
         png  Pseudoalteromonas nigrifaciens
         ptd  Pseudoalteromonas tetraodonis
         psen  Pseudoalteromonas sp. NC201
         pdj  Pseudoalteromonas donghaensis
         paga  Pseudoalteromonas agarivorans
         pcar  Pseudoalteromonas carrageenovora
         pmaa  Pseudoalteromonas marina
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       Marinobacter (12)
         maq  Marinobacter hydrocarbonoclasticus VT8
         mhc  Marinobacter hydrocarbonoclasticus ATCC 49840
         mad  Marinobacter adhaerens
         mbs  Marinobacter sp. BSs20148
         msr  Marinobacter salarius
         msx  Marinobacter similis
         mpq  Marinobacter psychrophilus
         mari  Marinobacter sp. CP1
         mlq  Marinobacter sp. LQ44
         msq  Marinobacter salinus
         mara  Marinobacter sp. Arc7-DN-1
         marj  Marinobacter sp. JH2
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 11/307
       Alteromonas (23)
         amc  Alteromonas mediterranea DE
         amh  Alteromonas mediterranea 615
         amaa  Alteromonas mediterranea DE1
         amal  Alteromonas mediterranea U4
         amae  Alteromonas mediterranea U7
         amao  Alteromonas mediterranea U8
         amad  Alteromonas mediterranea UM4b
         amai  Alteromonas mediterranea UM7
         amag  Alteromonas mediterranea MED64
         amac  Alteromonas macleodii ATCC 27126
         amb  Alteromonas macleodii Balearic Sea AD45
         amg  Alteromonas macleodii English Channel 673
         amk  Alteromonas macleodii Black Sea 11
         alt  Alteromonas naphthalenivorans
         aal  Alteromonas australica H 17
         aaus  Alteromonas australica DE170
         asp  Alteromonas stellipolaris LMG 21856
         asq  Alteromonas stellipolaris LMG 21861
         aaw  Alteromonas addita
         alr  Alteromonas sp. RKMC-009
         ale  Alteromonas sp. Mac1
         alz  Alteromonas sp. Mac2
         apel  Alteromonas pelagimontana
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       Glaciecola (2)
         gag  Glaciecola sp. 4H-3-7+YE-5
         gni  Glaciecola nitratireducens
 11/307
 10/307
       Paraglaciecola (2)
         gps  Paraglaciecola psychrophila
         pmes  Paraglaciecola mesophila
 10/307
 11/307
       Lacimicrobium (1)
         lal  Lacimicrobium alkaliphilum
 10/307
       Catenovulum (1)
         cate  Catenovulum sp. CCB-QB4
 10/307
       Saliniradius (1)
         salh  Saliniradius amylolyticus
 10/307
       Salinimonas (2)
         salm  Salinimonas sediminis
         salk  Salinimonas sp. KX18D6
 10/307
 10/307
       Hydrocarboniclastica (1)
         hmi  Hydrocarboniclastica marina
 11/307
       Psychromonas (2)
         pin  Psychromonas ingrahamii
         psy  Psychromonas sp. CNPT3
 10/307
  2/307
       Ferrimonas (2)
         fbl  Ferrimonas balearica
         fes  Ferrimonas sp. S7
 11/307
 10/307
       Moritella (3)
         mvs  Moritella viscosa
         mya  Moritella yayanosii
         mmaa  Moritella marina
 11/307
 11/307
 11/307
       Cellvibrio (5)
         cja  Cellvibrio japonicus
         ceb  Cellvibrio sp. PSBB023
         cell  Cellvibrio sp. PSBB006
         cek  Cellvibrio sp. KY-YJ-3
         ceg  Cellvibrio sp. KY-GH-1
  2/307
  2/307
  2/307
  2/307
  2/307
       Saccharophagus (1)
         sde  Saccharophagus degradans
  3/307
       Teredinibacter (1)
         ttu  Teredinibacter turnerae
 11/307
       Simiduia (1)
         saga  Simiduia agarivorans
  3/307
       Spongiibacter (1)
         spoi  Spongiibacter sp. IMCC21906
 11/307
       Zhongshania (1)
         zal  Zhongshania aliphaticivorans
 11/307
       Oceanicoccus (1)
         osg  Oceanicoccus sagamiensis
 11/307
       Microbulbifer (6)
         mthd  Microbulbifer thermotolerans
         micc  Microbulbifer aggregans
         maga  Microbulbifer agarilyticus
         mii  Microbulbifer sp. A4B17
         mict  Microbulbifer sp. THAF38
         mhyd  Microbulbifer hydrolyticus
 11/307
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  3/307
 11/307
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       Halioglobus (2)
         hja  Halioglobus japonicus
         halc  Halioglobus maricola
 11/307
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       Kineobactrum (1)
         kim  Kineobactrum sp. M2
  3/307
       Coxiella (8)
         cbu  Coxiella burnetii RSA 493
         cbs  Coxiella burnetii RSA 331
         cbd  Coxiella burnetii Dugway 5J108-111
         cbg  Coxiella burnetii CbuG_Q212
         cbc  Coxiella burnetii CbuK_Q154
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       Rickettsiella (1)
         rvi  Candidatus Rickettsiella viridis
  9/307
       Aquicella (2)
         alg  Aquicella lusitana
         asip  Aquicella siphonis
 10/307
 10/307
       Legionella (23)
         lpn  Legionella pneumophila subsp. pneumophila Philadelphia 1 (serogroup 1)
         lph  Legionella pneumophila subsp. pneumophila HL06041035 (serogroup 1)
         lpo  Legionella pneumophila subsp. pneumophila Lorraine (serogroup 1)
         lpu  Legionella pneumophila subsp. pneumophila LPE509
         lpm  Legionella pneumophila subsp. pneumophila Thunder Bay
         lpf  Legionella pneumophila Lens (serogroup 1)
         lpp  Legionella pneumophila Paris (serogroup 1)
         lpc  Legionella pneumophila Corby
         lpa  Legionella pneumophila 2300/99 Alcoy (serogroup 1)
         lpe  Legionella pneumophila subsp. pneumophila ATCC 43290 (serogroup 12)
         llo  Legionella longbeachae
         lfa  Legionella fallonii
         lha  Legionella hackeliae
         lok  Legionella oakridgensis
         lcd  Legionella clemsonensis
         les  Legionella endosymbiont of Polyplax serrata
         lsh  Legionella sainthelensi
         llg  Legionella lansingensis
         lib  Legionella israelensis
         lgt  Legionella geestiana
         ljr  Legionella jordanis
         lcj  Legionella cherrii
         lwa  Legionella waltersii
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       Tatlockia (1)
         tmc  Tatlockia micdadei
  9/307
       Methylococcus (2)
         mca  Methylococcus capsulatus
         metu  Methylococcus sp. IM1
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       Methylomonas (5)
         mmt  Methylomonas methanica
         mdn  Methylomonas denitrificans
         mdh  Methylomonas sp. DH-1
         mko  Methylomonas koyamae
  7/307
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       Methylomicrobium (2)
         mah  Methylomicrobium alcaliphilum
         mbur  Methylomicrobium buryatense
  9/307
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       Methylovulum (1)
       Methylocaldum (1)
         mmai  Methylocaldum marinum
  9/307
       Methylospira (1)
         mmob  Candidatus Methylospira mobilis
  8/307
       Francisella (43)
         ftu  Francisella tularensis subsp. tularensis SCHU S4
         ftq  Francisella tularensis subsp. tularensis SCHU S4 NR-28534
         ftf  Francisella tularensis subsp. tularensis FSC198
         ftw  Francisella tularensis subsp. tularensis WY96-3418
         ftr  Francisella tularensis subsp. tularensis NE061598
         ftt  Francisella tularensis subsp. tularensis TI0902
         ftg  Francisella tularensis subsp. tularensis TIGB03
         ftl  Francisella tularensis subsp. holarctica LVS
         fth  Francisella tularensis subsp. holarctica OSU18
         fta  Francisella tularensis subsp. holarctica FTNF002-00
         fts  Francisella tularensis subsp. holarctica F92
         fti  Francisella tularensis subsp. holarctica FSC200
         fto  Francisella tularensis subsp. holarctica PHIT-FT049
         ftc  Francisella tularensis subsp. holarctica FTT_1
         ftv  Francisella tularensis subsp. holarctica VT68
         ftz  Francisella tularensis subsp. holarctica 425
         ftm  Francisella tularensis subsp. mediasiatica FSC147
         ftn  Francisella tularensis subsp. novicida U112
         ftx  Francisella tularensis subsp. novicida U112
         ftd  Francisella tularensis subsp. novicida F6168
         fty  Francisella tularensis subsp. novicida DPG 3A-IS
         fcf  Francisella cf. novicida Fx1
         fcn  Francisella hispaniensis 3523
         fhi  Francisella hispaniensis FSC454
         fph  Francisella philomiragia subsp. philomiragia ATCC 25017
         fpt  Francisella philomiragia subsp. philomiragia ATCC 25015 O#319L
         fpi  Francisella philomiragia O#319-029
         fpm  Francisella philomiragia O#319-036
         fpx  Francisella philomiragia O#319-067
         fpz  Francisella philomiragia GA01-2794
         fpj  Francisella philomiragia GA01-2801
         frt  Francisella salina
         fna  Francisella noatunensis subsp. orientalis Toba 04
         fnl  Francisella noatunensis subsp. orientalis LADL--07-285A
         frf  Francisella sp. FSC1006
         fper  Francisella persica
         fha  Francisella halioticida
         frx  Francisella uliginis
         frm  Francisella sp. MA067296
         frc  Francisella frigiditurris
         fad  Francisella adeliensis
         fmi  Francisella marina
         foo  Francisella opportunistica
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       Allofrancisella (2)
         fgu  Allofrancisella guangzhouensis
         afri  Allofrancisella frigidaquae
  8/307
  8/307
       Hydrogenovibrio (2)
       Thiomicrospira (3)
       Methylophaga (2)
         mej  Methylophaga nitratireducenticrescens
         mec  Methylophaga frappieri
  9/307
  9/307
       Cycloclasticus (3)
         cyq  Cycloclasticus sp. P1
         cza  Cycloclasticus zancles
         cyy  Cycloclasticus sp. PY97N
  9/307
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       Piscirickettsia (1)
         psal  Piscirickettsia salmonis
  9/307
       Thiomicrorhabdus (1)
       Thioploca (1)
         tig  Thioploca ingrica
  8/307
       Beggiatoa (1)
         blep  Beggiatoa leptomitiformis
  2/307
       Nitrosococcus (4)
         noc  Nitrosococcus oceani
         nhl  Nitrosococcus halophilus
         nwa  Nitrosococcus watsonii
         nwr  Nitrosococcus wardiae
 10/307
 10/307
 10/307
 10/307
       Allochromatium (1)
         alv  Allochromatium vinosum
  9/307
       Thiocystis (1)
         tvi  Thiocystis violascens
  9/307
       Thioflavicoccus (1)
         tmb  Thioflavicoccus mobilis
 10/307
       Marichromatium (1)
         mpur  Marichromatium purpuratum
  2/307
       Tenderia (1)
         tee  Candidatus Tenderia electrophaga
 10/307
       Nitrosoglobus (1)
         ntt  Candidatus Nitrosoglobus terrae
  9/307
       Thiodictyon (1)
         tsy  Candidatus Thiodictyon syntrophicum
 10/307
       Rheinheimera (1)
         rhh  Rheinheimera sp. D18
 10/307
       Thermochromatium (1)
       Alkalilimnicola (1)
       Halorhodospira (2)
       Ectothiorhodospira (2)
         ebs  Ectothiorhodospira sp. BSL-9
  9/307
       Thioalkalivibrio (5)
         tgr  Thioalkalivibrio sulfidiphilus
         tvr  Thioalkalivibrio versutus
 10/307
  9/307
       Spiribacter (4)
       Acidihalobacter (1)
         aprs  Acidihalobacter prosperus
 10/307
       Halothiobacillus (2)
       Wenzhouxiangella (1)
         wma  Wenzhouxiangella marina
 10/307
       Woeseia (1)
         woc  Woeseia oceani
 14/307
       Granulosicoccus (1)
         gai  Granulosicoccus antarcticus
  2/307
       Guyparkeria (1)
       Thiohalobacter (1)
         ttc  Thiohalobacter thiocyanaticus
 10/307
       Hahella (2)
         hch  Hahella chejuensis
         hahe  Hahella sp. KA22
 11/307
 11/307
       Chromohalobacter (1)
         csa  Chromohalobacter salexigens
  3/307
       Halomonas (18)
         hel  Halomonas elongata
         hcs  Halomonas campaniensis
         hak  Halomonas sp. KO116
         ham  Halomonas sp. R57-5
         hhu  Halomonas huangheensis
         hco  Halomonas chromatireducens
         hsi  Halomonas aestuarii
         halo  Halomonas sp. 1513
         hhh  Halomonas hydrothermalis
         hbe  Halomonas beimenensis
         hag  Halomonas sp. GFAJ-1
         haf  Halomonas sp. SF2003
         halk  Halomonas alkaliphila
         hvn  Halomonas venusta
         hol  Halomonas olivaria
         hsr  Halomonas sulfidaeris
         hmd  Halomonas meridiana
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  2/307
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       Portiera (9)
       Carsonella (7)
       Evansia (1)
       Zymobacter (1)
       Halotalea (1)
         haa  Halotalea alkalilenta
  2/307
       Cobetia (1)
         cmai  Cobetia marina
  3/307
       Kushneria (3)
       Pistricoccus (1)
         paur  Pistricoccus aurantiacus
  3/307
       Alcanivorax (5)
         abo  Alcanivorax borkumensis
         adi  Alcanivorax dieselolei
         apac  Alcanivorax pacificus
         aln  Alcanivorax sp. NBRC 101098
         axe  Alcanivorax xenomutans
 11/307
 15/307
 15/307
 11/307
 15/307
       Ketobacter (1)
         kak  Ketobacter alkanivorans
 11/307
       Kangiella (4)
         kko  Kangiella koreensis
         kge  Kangiella geojedonensis
         ksd  Kangiella sediminilitoris
         kpd  Kangiella profundi
  9/307
  9/307
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       Marinomonas (3)
         mmw  Marinomonas sp. MWYL1
         mme  Marinomonas mediterranea
         mpc  Marinomonas posidonica
  3/307
  3/307
  3/307
       Thalassolituus (2)
         tol  Thalassolituus oleivorans MIL-1
         tor  Thalassolituus oleivorans R6-15
 11/307
 11/307
       Oleispira (1)
         oai  Oleispira antarctica
 11/307
       Marinobacterium (1)
         mars  Marinobacterium aestuarii
  2/307
       Bacterioplanes (1)
         bsan  Bacterioplanes sanyensis
 11/307
       Neptunomonas (1)
         ncu  Neptunomonas concharum
  2/307
       Nitrincola (1)
         nik  Nitrincola sp. KXZD1103
  2/307
       Bermanella (1)
         bmar  Bermanella marisrubri
 11/307
       Gynuella (1)
         gsn  Gynuella sunshinyii
 11/307
       Reinekea (1)
         rfo  Reinekea forsetii
  9/307
       Oleiphilus (1)
         ome  Oleiphilus messinensis
 11/307
       Litoricola (1)
         llp  Litoricola lipolytica
  2/307
       Aeromonas (22)
         aha  Aeromonas hydrophila subsp. hydrophila ATCC 7966
         ahy  Aeromonas hydrophila ML09-119
         ahd  Aeromonas hydrophila YL17
         ahr  Aeromonas hydrophila AL09-71
         ahp  Aeromonas hydrophila pc104A
         ahj  Aeromonas hydrophila J-1
         ahh  Aeromonas hydrophila AL06-06
         ahi  Aeromonas hydrophila AH10
         aaj  Aeromonas hydrophila MX16A
         asa  Aeromonas salmonicida subsp. salmonicida A449
         aeo  Aeromonas salmonicida O23A
         avr  Aeromonas veronii B565
         avo  Aeromonas veronii TH0426
         amed  Aeromonas media
         asr  Aeromonas schubertii
         adh  Aeromonas dhakensis
         acav  Aeromonas caviae
         aem  Aeromonas sp. CU5
         aea  Aeromonas sp. ASNIH3
         arv  Aeromonas rivipollensis
         aes  Aeromonas sp. ASNIH5
         ael  Aeromonas encheleia
 11/307
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  3/307
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 15/307
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 11/307
       Tolumonas (1)
         tau  Tolumonas auensis
  2/307
       Oceanimonas (1)
         oce  Oceanimonas sp. GK1
  3/307
       Oceanisphaera (2)
         ocm  Oceanisphaera avium
         opf  Oceanisphaera profunda
  3/307
  3/307
       Zobellella (1)
         zdf  Zobellella denitrificans
 11/307
       Dichelobacter (1)
       Cardiobacterium (1)
       Gilliamella (1)
       Frischella (1)
       Orbus (1)
       Steroidobacter (1)
         sdf  Steroidobacter denitrificans
  6/307
       Solimonas (1)
         sok  Solimonas sp. K1W22B-7
 14/307
       Sinimarinibacterium (1)
         sini  Sinimarinibacterium sp. NLF-5-8
 10/307
       Immundisolibacter (1)
         gbi  Immundisolibacter cernigliae
  2/307
       Sulfuricaulis (1)
         slim  Sulfuricaulis limicola
 10/307
       Sulfurifustis (1)
         sva  Sulfurifustis variabilis
 10/307
       Acidiferrobacter (1)
         acii  Acidiferrobacter sp. SPIII_3
  9/307
       Salinisphaera (1)
         saln  Salinisphaera sp. LB1
  9/307
       Thiolapillus (1)
         tbn  Thiolapillus brandeum
  9/307
       Sedimenticola (1)
         seds  Sedimenticola thiotaurini
  2/307
       Thioglobus (3)
       Pseudohongiella (1)
         pspi  Pseudohongiella spirulinae
 11/307
       Nardonella (1)
       Reidiella (1)
       Ruthia (1)
       Vesicomyosocius (1)
       Unclassified Gammaproteobacteria (6)
         gpb  Gamma proteobacterium HdN1
         enm  Endosymbiont of unidentified scaly snail isolate Monju
 13/307
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     Betaproteobacteria (445)
       Neisseria (29)
         nms  Neisseria meningitidis M01-240355 (serogroup B)
         nmt  Neisseria meningitidis 8013 (serogroup C)
         nmi  Neisseria meningitidis alpha14 (cnl strain)
         nla  Neisseria lactamica
         nel  Neisseria elongata
  2/307
  2/307
  2/307
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       Snodgrassella (1)
       Kingella (1)
       Vitreoscilla (2)
         vff  Vitreoscilla filiformis
  9/307
       Eikenella (2)
         ecor  Eikenella corrodens
  2/307
       Simonsiella (1)
       Unclassified Neisseriaceae (1)
         nba  Neisseriaceae bacterium DSM 100970
  9/307
       Chromobacterium (7)
         cvi  Chromobacterium violaceum
         cvc  Chromobacterium vaccinii
         chro  Chromobacterium sp. ATCC 53434
         chri  Chromobacterium sp. IIBBL 112-1
         crz  Chromobacterium rhizoryzae
         chrb  Chromobacterium sp. IIBBL 274-1
         chrm  Chromobacterium sp. 257-1
 10/307
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 10/307
       Iodobacter (1)
         iod  Iodobacter sp. H11R3
  9/307
       Laribacter (1)
       Pseudogulbenkiania (1)
         pse  Pseudogulbenkiania sp. NH8B
 10/307
       Jeongeupia (1)
         jeu  Jeongeupia sp. USM3
  9/307
       Aquaspirillum (1)
         aql  Aquaspirillum sp. LM1
 10/307
       Aquitalea (2)
         amah  Aquitalea magnusonii
         aqs  Aquitalea sp. USM4
 10/307
 10/307
       Deefgea (1)
         dee  Deefgea sp. D17
  9/307
       Ralstonia (13)
         rso  Ralstonia solanacearum GMI1000
         rsc  Ralstonia solanacearum CFBP2957
         rsl  Ralstonia solanacearum PSI07
         rsn  Ralstonia solanacearum Po82
         rsm  Ralstonia solanacearum CMR15
         rse  Ralstonia solanacearum FQY_4
         rsy  Ralstonia solanacearum UY031
         rpi  Ralstonia pickettii 12J
         rpf  Ralstonia pickettii 12D
         rpj  Ralstonia pickettii DTP0602
         rmn  Ralstonia mannitolilytica
         rin  Ralstonia insidiosa
         rpu  Ralstonia pseudosolanacearum
 10/307
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       Cupriavidus (13)
         reh  Cupriavidus necator H16
         cnc  Cupriavidus necator N-1
         cuh  Cupriavidus necator NH9
         reu  Cupriavidus pinatubonensis JMP134
         rme  Cupriavidus metallidurans
         cti  Cupriavidus taiwanensis
         cbw  Cupriavidus basilensis
         cgd  Cupriavidus gilardii
         ccup  Cupriavidus sp. USMAHM13
         cup  Cupriavidus malaysiensis
         cuu  Cupriavidus sp. USMAA2-4
         cpau  Cupriavidus pauculus
         cox  Cupriavidus oxalaticus
 10/307
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 10/307
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  2/307
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       Burkholderia (89)
         bma  Burkholderia mallei ATCC 23344
         bmv  Burkholderia mallei SAVP1
         bml  Burkholderia mallei NCTC 10229
         bmn  Burkholderia mallei NCTC 10247
         bmal  Burkholderia mallei 23344
         bmae  Burkholderia mallei 6
         bmaq  Burkholderia mallei BMQ
         bmai  Burkholderia mallei 2000031063
         bmaf  Burkholderia mallei FMH 23344
         bmaz  Burkholderia mallei NCTC 10247
         bmab  Burkholderia mallei 2002734299
         bps  Burkholderia pseudomallei K96243
         bpm  Burkholderia pseudomallei 1710b
         bpl  Burkholderia pseudomallei 1106a
         bpd  Burkholderia pseudomallei 668
         bpr  Burkholderia pseudomallei MSHR346
         bpse  Burkholderia pseudomallei MSHR305
         bpsm  Burkholderia pseudomallei MSHR511
         bpsu  Burkholderia pseudomallei MSHR146
         bpsd  Burkholderia pseudomallei MSHR520
         bpz  Burkholderia pseudomallei 1026b
         bpq  Burkholderia pseudomallei BPC006
         bpk  Burkholderia pseudomallei NCTC 13179
         bpsh  Burkholderia pseudomallei HBPUB10134a
         bpsa  Burkholderia pseudomallei NAU35A-3
         bpso  Burkholderia pseudomallei A79A
         but  Burkholderia pseudomallei TSV202
         bte  Burkholderia thailandensis E264
         btq  Burkholderia thailandensis 2002721723
         btj  Burkholderia thailandensis E444
         btz  Burkholderia thailandensis H0587
         btd  Burkholderia thailandensis MSMB121
         btv  Burkholderia thailandensis MSMB59
         bthe  Burkholderia thailandensis E254
         bthm  Burkholderia thailandensis USAMRU Malaysia #20
         btha  Burkholderia thailandensis 2003015869
         bthl  Burkholderia thailandensis 2002721643
         bok  Burkholderia oklahomensis E0147
         boc  Burkholderia oklahomensis C6786
         buu  Burkholderia sp. BDU6
         bvi  Burkholderia vietnamiensis G4
         bve  Burkholderia vietnamiensis LMG 10929
         bur  Burkholderia lata
         bcn  Burkholderia cenocepacia AU1054
         bch  Burkholderia cenocepacia HI2424
         bcm  Burkholderia cenocepacia MC0-3
         bcj  Burkholderia cenocepacia J2315
         bcen  Burkholderia cenocepacia DDS 22E-1
         bcew  Burkholderia cenocepacia DWS 37E-2
         bceo  Burkholderia cenocepacia H111
         bam  Burkholderia ambifaria AMMD
         bac  Burkholderia ambifaria MC40-6
         bmj  Burkholderia multivorans ATCC 17616 (Tohoku)
         bmu  Burkholderia multivorans ATCC 17616 (JGI)
         bmk  Burkholderia multivorans DDS 15A-1
         bmul  Burkholderia multivorans ATCC BAA-247
         bct  Burkholderia cepacia GG4
         bced  Burkholderia cepacia DDS 7H-2
         bcep  Burkholderia cepacia ATCC 25416
         bdl  Burkholderia dolosa
         bpyr  Burkholderia pyrrocinia
         bcon  Burkholderia contaminans
         bub  Burkholderia ubonensis
         bdf  Burkholderia diffusa
         blat  Burkholderia latens
         btei  Burkholderia territorii
         bsem  Burkholderia seminalis
         bpsl  Burkholderia pseudomultivorans
         bmec  Burkholderia metallica
         bstg  Burkholderia stagnalis
         bstl  Burkholderia stabilis
         bgl  Burkholderia glumae BGR1
         bgu  Burkholderia glumae LMG 2196 = ATCC 33617
         bug  Burkholderia sp. CCGE1001
         bgf  Burkholderia sp. CCGE1003
         bgd  Burkholderia gladioli BSR3
         bgo  Burkholderia gladioli ATCC 10248
         byi  Burkholderia sp. YI23
         buk  Burkholderia sp. KJ006
         buo  Burkholderia insecticola
         bue  Burkholderia sp. RPE67
         bul  Burkholderia sp. 2002721687
         buq  Burkholderia sp. HB1
         bgp  Burkholderia plantarii PG1
         bpla  Burkholderia plantarii ATCC 43733
         bud  Burkholderia sp. Bp5365
         buz  Burkholderia sp. OLGA172
         bum  Burkholderia sp. PAMC 26561
         bui  Burkholderia sp. PAMC 28687
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       Paraburkholderia (18)
         bxe  Paraburkholderia xenovorans LB400
         bxb  Paraburkholderia xenovorans LB400
         bph  Paraburkholderia phymatum
         bge  Paraburkholderia sp. CCGE1002
         bpx  Paraburkholderia phenoliruptrix
         bpy  Paraburkholderia phytofirmans
         bfn  Paraburkholderia fungorum
         bcai  Paraburkholderia caribensis
         pspw  Paraburkholderia sprentiae
         para  Paraburkholderia sp. SOS3
         parb  Paraburkholderia aromaticivorans
         phs  Paraburkholderia hospita
         pter  Paraburkholderia terrae
         pgp  Paraburkholderia graminis
         pcj  Paraburkholderia caledonica
         pts  Paraburkholderia terricola
         pcaf  Paraburkholderia caffeinilytica
         pmeg  Paraburkholderia megapolitana
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 10/307
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  2/307
 14/307
       Mycetohabitans (1)
         brh  Paraburkholderia rhizoxinica
  9/307
       Polynucleobacter (4)
         pnu  Polynucleobacter asymbioticus
         pne  Polynucleobacter necessarius
         pdq  Polynucleobacter duraquae
         poh  Polynucleobacter paneuropaeus
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  8/307
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       Pandoraea (14)
         ppk  Pandoraea pnomenusa 3kgm
         ppno  Pandoraea pnomenusa RB38
         ppnm  Pandoraea pnomenusa DSM 16536
         prb  Pandoraea pnomenusa
         ppul  Pandoraea pulmonicola
         pspu  Pandoraea sputorum
         papi  Pandoraea apista
         pve  Pandoraea vervacti
         pox  Pandoraea oxalativorans
         ptx  Pandoraea thiooxydans
         pfg  Pandoraea faecigallinarum
         pnr  Pandoraea norimbergensis
         pand  Pandoraea sp. XY-2
         pfib  Pandoraea fibrosis
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       Paucimonas (1)
         plg  Paucimonas lemoignei
 21/307
       Ephemeroptericola (1)
         hyf  Ephemeroptericola cinctiostellae
  8/307
       Lautropia (1)
         lmir  Lautropia mirabilis
  2/307
       Mycoavidus (1)
         mcys  Mycoavidus cysteinexigens
  9/307
       Caballeronia (1)
         caba  Caballeronia sp. SBC2
 10/307
       Limnobacter (1)
         limn  Limnobacter sp. SAORIC-580
 10/307
       Bordetella (24)
         bpe  Bordetella pertussis Tohama I
         bpc  Bordetella pertussis CS
         bper  Bordetella pertussis 18323
         bpet  Bordetella pertussis B1917
         bpeu  Bordetella pertussis 137
         bpar  Bordetella parapertussis Bpp5
         bpa  Bordetella parapertussis 12822
         bbh  Bordetella bronchiseptica 253
         bbr  Bordetella bronchiseptica RB50
         bbm  Bordetella bronchiseptica MO149
         bbx  Bordetella bronchiseptica S798
         bpt  Bordetella petrii
         bav  Bordetella avium
         bho  Bordetella holmesii ATCC 51541
         bhm  Bordetella holmesii 44057
         bhz  Bordetella hinzii
         btrm  Bordetella trematum
         bbro  Bordetella bronchialis
         bfz  Bordetella flabilis
         bpdz  Bordetella pseudohinzii
         boh  Bordetella sp. H567
         bgm  Bordetella genomosp. 13
         boz  Bordetella sp. HZ20
         boj  Bordetella sp. J329
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 20/307
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 12/307
 10/307
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 10/307
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  9/307
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       Achromobacter (9)
         axy  Achromobacter xylosoxidans A8
         axo  Achromobacter xylosoxidans NH44784-1996
         axn  Achromobacter xylosoxidans NBRC 15126 = ATCC 27061
         axx  Achromobacter xylosoxidans NCTC10807
         adt  Achromobacter denitrificans
         ais  Achromobacter insolitus
         asw  Achromobacter spanius
         achr  Achromobacter sp. AONIH1
         achb  Achromobacter sp. B7
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 20/307
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       Taylorella (5)
       Pusillimonas (3)
         put  Pusillimonas sp. T7-7
         pus  Pusillimonas sp. ye3
         pud  Pusillimonas sp. DMV24BSW_D
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       Advenella (2)
         aka  Advenella kashmirensis
         amim  Advenella mimigardefordensis
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 20/307
       Castellaniella (1)
         cdn  Castellaniella defragrans
  9/307
       Basilea (1)
       Alcaligenes (3)
         afa  Alcaligenes faecalis ZD02
         afq  Alcaligenes faecalis JQ135
         aaqu  Alcaligenes aquatilis
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       Paenalcaligenes (1)
         phn  Paenalcaligenes hominis
 20/307
       Orrella (1)
         odi  Orrella dioscoreae
 10/307
       Oligella (1)
       Pigmentiphaga (2)
         pig  Pigmentiphaga sp. H8
         pacr  Pigmentiphaga aceris
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 20/307
       Kerstersia (1)
         kgy  Kerstersia gyiorum
 10/307
       Rhodoferax (6)
         rfr  Rhodoferax ferrireducens
         rsb  Rhodoferax saidenbachensis
         rac  Rhodoferax antarcticus
         rhy  Rhodoferax koreense
         rhf  Rhodoferax sp. CHu59-6-5
         rhg  Rhodoferax sp. Gr-4
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       Polaromonas (5)
         pol  Polaromonas sp. JS666
         pna  Polaromonas naphthalenivorans
         pos  Polaromonas sp. SP1
         poo  Polaromonas sp. Pch-P
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       Acidovorax (11)
         aav  Acidovorax citrulli
         ajs  Acidovorax sp. JS42
         dia  Acidovorax ebreus
         aaa  Acidovorax avenae
         ack  Acidovorax sp. KKS102
         acra  Acidovorax sp. RAC01
         acid  Acidovorax carolinensis NA2
         acip  Acidovorax carolinensis P4
         acin  Acidovorax carolinensis NA3
         acis  Acidovorax carolinensis P3
         acio  Acidovorax sp. 1608163
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       Verminephrobacter (1)
         vei  Verminephrobacter eiseniae
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       Delftia (4)
         dac  Delftia acidovorans
         del  Delftia sp. Cs1-4
         dts  Delftia tsuruhatensis
         dhk  Delftia sp. HK171
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       Variovorax (6)
         vap  Variovorax paradoxus S110
         vpe  Variovorax paradoxus EPS
         vpd  Variovorax paradoxus B4
         vaa  Variovorax sp. PAMC 28711
         vbo  Variovorax boronicumulans
         vam  Variovorax sp. PMC12
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       Comamonas (5)
         ctt  Comamonas thiooxydans
         ctes  Comamonas testosteroni TK102
         cser  Comamonas serinivorans
         cof  Comamonas sp. NLF 7-7
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       Alicycliphilus (2)
         adn  Alicycliphilus denitrificans BC
         adk  Alicycliphilus denitrificans K601
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       Ramlibacter (1)
         rta  Ramlibacter tataouinensis
 10/307
       Symbiobacter (1)
       Ottowia (2)
         otk  Ottowia oryzae
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       Limnohabitans (2)
         lim  Limnohabitans sp. 103DPR2
         lih  Limnohabitans sp. 63ED37-2
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 10/307
       Hydrogenophaga (6)
         hyr  Hydrogenophaga sp. RAC07
         hyb  Hydrogenophaga sp. PBC
         hyl  Hydrogenophaga sp. LPB0072
         hyc  Hydrogenophaga sp. PAMC20947
         hpse  Hydrogenophaga pseudoflava
         hyn  Hydrogenophaga sp. BPS33
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 11/307
 10/307
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       Diaphorobacter (2)
         dpy  Diaphorobacter polyhydroxybutyrativorans
         dih  Diaphorobacter sp. HDW4A
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 24/307
       Simplicispira (1)
         simp  Simplicispira suum
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       Melaminivora (2)
         melm  Pulveribacter suum
         mela  Melaminivora sp. SC2-9
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       Serpentinomonas (2)
         cbaa  Serpentinomonas raichei
         cbab  Serpentinomonas mccroryi
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       Methylibium (2)
         mpt  Methylibium petroleiphilum
         metp  Methylibium sp. Pch-M
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 10/307
       Herminiimonas (1)
         har  Herminiimonas arsenicoxydans
 11/307
       Janthinobacterium (8)
         mms  Janthinobacterium sp. Marseille
         jag  Janthinobacterium agaricidamnosum
         jab  Janthinobacterium sp. B9-8
         jaz  Janthinobacterium sp. 1_2014MBL_MicDiv
         jal  Janthinobacterium sp. LM6
         jsv  Janthinobacterium svalbardensis
         jaj  Janthinobacterium sp. 17J80-10
         jas  Janthinobacterium sp. SNU WT3
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       Herbaspirillum (6)
         hse  Herbaspirillum seropedicae SmR1
         hsz  Herbaspirillum seropedicae Z67
         hht  Herbaspirillum hiltneri
         hrb  Herbaspirillum rubrisubalbicans
         hee  Herbaspirillum sp. meg3
         hhf  Herbaspirillum huttiense
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 10/307
       Zinderia (1)
       Collimonas (3)
         cfu  Collimonas fungivorans
         care  Collimonas arenae
         cpra  Collimonas pratensis
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       Massilia (10)
         mnr  Massilia sp. NR 4-1
         masw  Massilia sp. WG5
         mass  Massilia violaceinigra
         masz  Massilia armeniaca
         mtim  Massilia oculi
         masy  Massilia sp. YMA4
         mali  Massilia albidiflava
         mum  Massilia umbonata
         mfla  Massilia flava
         mpli  Massilia plicata
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       Oxalobacter (1)
       Undibacterium (2)
         upv  Undibacterium parvum
 10/307
       Noviherbaspirillum (1)
         nok  Noviherbaspirillum sp. UKPF54
 15/307
       Duganella (1)
         dug  Duganella sp. AF9R3
 10/307
       Sutterella (2)
       Leptothrix (1)
         lch  Leptothrix cholodnii
 10/307
       Thiomonas (2)
         tin  Thiomonas intermedia
         thi  Thiomonas arsenitoxydans
 10/307
 10/307
       Rubrivivax (2)
         rge  Rubrivivax gelatinosus
         rbn  Rubrivivax benzoatilyticus
 10/307
 10/307
       Roseateles (1)
         rdp  Roseateles depolymerans
 10/307
       Paucibacter (1)
         pkt  Paucibacter sp. KCTC 42545
 10/307
       Mitsuaria (1)
         miu  Mitsuaria sp. 7
 10/307
       Rhizobacter (1)
         rgu  Rhizobacter gummiphilus
 11/307
       Aquabacterium (1)
         aon  Aquabacterium olei
 10/307
       Sphaerotilus (1)
         snn  Sphaerotilus natans
 10/307
       Xylophilus (1)
         xyk  Xylophilus sp. KACC 21265
 10/307
       Unclassified Burkholderiales (3)
         bbag  Burkholderiales bacterium GJ-E10
         pbh  Polyangium brachysporum
  9/307
 10/307
       Nitrosomonas (7)
         neu  Nitrosomonas europaea
         net  Nitrosomonas eutropha
         nit  Nitrosomonas sp. AL212
         nii  Nitrosomonas sp. Is79A3
         nco  Nitrosomonas communis
         nur  Nitrosomonas ureae
         nst  Nitrosomonas stercoris
  9/307
  9/307
 10/307
 10/307
 10/307
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  9/307
       Nitrosospira (2)
         nmu  Nitrosospira multiformis
         nlc  Nitrosospira lacus
 10/307
 10/307
       Sulfuritalea (1)
         shd  Sulfuritalea hydrogenivorans
  2/307
       Methyloversatilis (1)
         metr  Methyloversatilis sp. RAC08
 10/307
       Thiobacillus (1)
         tbd  Thiobacillus denitrificans
  9/307
       Methylobacillus (1)
       Methylotenera (2)
         meh  Methylotenera versatilis
  9/307
       Methylovorus (2)
         mei  Methylovorus glucosetrophus
         mep  Methylovorus sp. MP688
  9/307
  9/307
       Methylopumilus (2)
         mbac  Candidatus Methylopumilus turicensis
         mbat  Candidatus Methylopumilus planktonicus
  8/307
  8/307
       Methylophilus (1)
         meu  Methylophilus sp. TWE2
  9/307
       Sideroxydans (1)
         slt  Sideroxydans lithotrophicus
 10/307
       Gallionella (1)
         gca  Gallionella capsiferriformans
  2/307
       Sulfuricella (1)
       Sulfuriferula (3)
         sulf  Sulfuriferula sp. AH1
         splb  Sulfuriferula plumbiphila
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  9/307
       Ferriphaselus (1)
       Nitrotoga (1)
         nim  Candidatus Nitrotoga sp. AM1P
 10/307
       Aromatoleum (1)
         eba  Aromatoleum aromaticum
 14/307
       Azospira (1)
         dsu  Azospira oryzae
 10/307
       Rugosibacter (1)
         rbu  Rugosibacter aromaticivorans
  8/307
       Oryzomicrobium (1)
         otr  Oryzomicrobium terrae
 10/307
       Unclassified Rhodocyclaceae (1)
         rbh  Rhodocyclaceae bacterium Thauera-like
 10/307
       Dechloromonas (2)
         dar  Dechloromonas aromatica
         dey  Dechloromonas sp. HYN0024
  2/307
  2/307
       Azoarcus (9)
         azo  Azoarcus sp. BH72
         aza  Azoarcus sp. KH32C
         azi  Azoarcus sp. CIB
         aoa  Azoarcus olearius
         atw  Azoarcus sp. SY39
         acom  Azoarcus communis
         azd  Azoarcus sp. DN11
         azr  Azoarcus sp. DD4
         azq  Azoarcus sp. M9-3-2
 10/307
 10/307
  2/307
 10/307
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  2/307
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       Thauera (5)
         tmz  Thauera sp. MZ1T
         thu  Thauera humireducens
         tcl  Thauera chlorobenzoica
         thk  Thauera sp. K11
         tak  Thauera aromatica
 10/307
 10/307
  6/307
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  6/307
       Unclassified Zoogloeaceae (1)
         zpa  Zoogloeaceae bacteirum Par-f-2
 10/307
       Ferrovum (1)
         fmy  Ferrovum myxofaciens
  8/307
       Accumulibacter (1)
         app  Accumulibacter phosphatis
 14/307
       Tremblaya (3)
       Kinetoplastibacterium (8)
         kci  Candidatus Kinetoplastibacterium crithidii (ex Angomonas deanei ATCC 30255)
         kct  Candidatus Kinetoplastibacterium crithidii TCC036E
         kde  Candidatus Kinetoplastibacterium desouzaii
  9/307
  9/307
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       Profftella (1)
       Nasuia (1)
       Vidania (1)
       Unclassified Betaproteobacteria (3)
         bprc  Beta proteobacterium CB
         beb  Betaproteobacteria bacterium UKL13-2
         beba  Betaproteobacteria bacterium GR16-43
  9/307
 10/307
 10/307
     Epsilonproteobacteria (186)
       Helicobacter (76)
       Wolinella (1)
       Sulfurimonas (5)
       Sulfuricurvum (2)
       Campylobacter (67)
       Arcobacter (13)
         amar  Arcobacter marinus
         acaa  Arcobacter canalis
  2/307
  2/307
       Aliiarcobacter (1)
       Halarcobacter (2)
       Pseudoarcobacter (1)
       Unclassified Arcobacter (2)
       Sulfurospirillum (7)
         sdl  Sulfurospirillum deleyianum
         smul  Sulfurospirillum multivorans
         shal  Sulfurospirillum halorespirans
         suls  Sulfurospirillum sp. SL2-1
         sulj  Sulfurospirillum sp. JPD-1
         sult  Sulfurospirillum sp. ACSTCE
  2/307
  2/307
  2/307
  2/307
  2/307
  2/307
       Hydrogenimonas (1)
       Nitratifractor (1)
       Nitratiruptor (1)
       Sulfurovum (2)
       Nautilia (2)
       Caminibacter (1)
       Cetia (1)
     Deltaproteobacteria (90)
       Geobacter (11)
         gur  Geobacter uraniireducens
         geo  Geobacter daltonii FRC-32
  2/307
  2/307
       Geoalkalibacter (1)
       Pelobacter (4)
         pef  Pelobacter sp. SFB93
  2/307
       Desulfuromonas (2)
         des  Desulfuromonas soudanensis
  2/307
       Desulfovibrio (18)
       Pseudodesulfovibrio (5)
       Lawsonia (2)
       Desulfomicrobium (2)
         dba  Desulfomicrobium baculatum
  2/307
       Desulfohalobium (1)
       Desulfotalea (1)
         dps  Desulfotalea psychrophila
  2/307
       Desulfurivibrio (1)
       Desulfobulbus (2)
         dpr  Desulfobulbus propionicus
  2/307
       Desulfocapsa (1)
         dsf  Desulfocapsa sulfexigens
  2/307
       Desulfococcus (2)
         dml  Desulfococcus multivorans
  2/307
       Desulfatibacillum (1)
       Desulfobacterium (1)
         dat  Desulfobacterium autotrophicum
  2/307
       Desulfobacula (1)
       Desulfosarcina (3)
         dov  Desulfosarcina ovata
         dwd  Desulfosarcina widdelii
         dalk  Desulfosarcina alkanivorans
  2/307
  2/307
 10/307
       Anaeromyxobacter (4)
         ade  Anaeromyxobacter dehalogenans 2CP-C
         acp  Anaeromyxobacter dehalogenans 2CP-1
         afw  Anaeromyxobacter sp. Fw109-5
         ank  Anaeromyxobacter sp. K
  9/307
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       Myxococcus (3)
         mxa  Myxococcus xanthus
         msd  Myxococcus stipitatus
         mym  Myxococcus hansupus
 14/307
 13/307
 14/307
       Corallococcus (3)
         ccx  Corallococcus coralloides
         mfu  Corallococcus macrosporus
         mmas  Myxococcus macrosporus
 14/307
 13/307
 13/307
       Stigmatella (1)
         sur  Stigmatella aurantiaca
 14/307
       Archangium (1)
         age  Archangium gephyra
 18/307
       Melittangium (1)
         mbd  Melittangium boletus
 10/307
       Cystobacter (1)
         cfus  Cystobacter fuscus
 14/307
       Vulgatibacter (1)
         vin  Vulgatibacter incomptus
  8/307
       Sorangium (2)
         scl  Sorangium cellulosum So ce56
         scu  Sorangium cellulosum So0157-2
  9/307
  8/307
       Chondromyces (1)
         ccro  Chondromyces crocatus
 13/307
       Sandaracinus (1)
         samy  Sandaracinus amylolyticus
 17/307
       Labilithrix (1)
         llu  Labilithrix luteola
 17/307
       Minicystis (1)
         mrm  Minicystis rosea
 14/307
       Haliangium (1)
         hoh  Haliangium ochraceum
  8/307
       Syntrophus (1)
       Desulfobacca (1)
       Desulfomonile (1)
       Syntrophobacter (1)
       Desulfoglaeba (1)
       Desulfarculus (1)
       Hippea (1)
       Desulfurella (1)
       Bradymonas (1)
         bsed  Bradymonas sediminis
 17/307
     Alphaproteobacteria (701)
       Rickettsia (48)
         rpr  Rickettsia prowazekii Madrid E
         rpo  Rickettsia prowazekii BuV67-CWPP
         rpw  Rickettsia prowazekii Chernikova
         rpz  Rickettsia prowazekii Dachau
         rpg  Rickettsia prowazekii GvV257
         rps  Rickettsia prowazekii Katsinyian
         rpv  Rickettsia prowazekii RpGvF24
         rpq  Rickettsia prowazekii Rp22
         rpl  Rickettsia prowazekii Breinl
         rpn  Rickettsia prowazekii NMRC Madrid E
         rty  Rickettsia typhi Wilmington
         rtt  Rickettsia typhi TH1527
         rtb  Rickettsia typhi B9991CWPP
         rcm  Rickettsia canadensis McKiel
         rcc  Rickettsia canadensis CA410
         rbe  Rickettsia bellii RML369-C
         rco  Rickettsia conorii
         rfe  Rickettsia felis
         rak  Rickettsia akari
         rri  Rickettsia rickettsii Sheila Smith
         rrj  Rickettsia rickettsii Iowa
         rra  Rickettsia rickettsii Arizona
         rrc  Rickettsia rickettsii Colombia
         rrh  Rickettsia rickettsii Hauke
         rrb  Rickettsia rickettsii Brazil
         rrn  Rickettsia rickettsii Hino
         rrp  Rickettsia rickettsii Hlp#2
         rrm  Rickettsia rickettsii Morgan
         rrr  Rickettsia rickettsii R
         rms  Rickettsia massiliae MTU5
         rmi  Rickettsia massiliae AZT80
         rpk  Rickettsia peacockii
         raf  Rickettsia africae
         rhe  Rickettsia heilongjiangensis
         rja  Rickettsia japonica
         rsv  Rickettsia slovaca 13-B
         rsw  Rickettsia slovaca D-CWPP
         rph  Rickettsia philipii
         rau  Rickettsia australis
         rmo  Rickettsia montanensis
         rpp  Rickettsia parkeri
         rre  Rickettsia rhipicephali
         ram  Rickettsia amblyommatis GAT-30V
         rab  Rickettsia amblyommatis Ac37
         rmc  Rickettsia monacensis
         ras  Rickettsia asiatica
         ric  Rickettsia sp. MEAM1 (Bemisia tabaci)
  8/307
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       Orientia (2)
       Phycorickettsia (1)
         ptc  Candidatus Phycorickettsia trachydisci
  8/307
       Wolbachia (10)
       Anaplasma (10)
       Ehrlichia (14)
       Neorickettsia (4)
       Midichloria (1)
         mmn  Candidatus Midichloria mitochondrii
  8/307
       Fokinia (1)
         fso  Candidatus Fokinia solitaria
  8/307
       Unclassified Rickettsiales (2)
       Paracaedibacter (1)
       Paracaedimonas (1)
       Nucleicultrix (1)
       Unclassified Holosporaceae (1)
       Mesorhizobium (11)
         mlo  Mesorhizobium japonicum MAFF 303099
         mln  Mesorhizobium loti NZP2037
         mci  Mesorhizobium ciceri (biovar Biserrulae)
         mop  Mesorhizobium opportunistum
         mam  Mesorhizobium australicum
         mamo  Mesorhizobium amorphae
         meso  Mesorhizobium sp. B7
         mesw  Mesorhizobium sp. WSM1497
         mesm  Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2
         mesp  Mesorhizobium sp. Pch-S
         mhua  Mesorhizobium huakuii
  3/307
  3/307
  3/307
  3/307
  3/307
  3/307
  7/307
  3/307
  3/307
  3/307
  3/307
       Chelativorans (1)
         mes  Chelativorans sp. BNC1
  3/307
       Hoeflea (1)
         hoe  Hoeflea sp. IMCC20628
  3/307
       Aminobacter (2)
         aak  Aminobacter aminovorans
         amih  Aminobacter sp. MSH1
  3/307
  3/307
       Phyllobacterium (1)
         pht  Phyllobacterium zundukense
  3/307
       Roseitalea (1)
         rpod  Roseitalea porphyridii
  3/307
       Nitratireductor (1)
         niy  Nitratireductor sp. SY7
  3/307
       Oricola (1)
       Parvibaculum (1)
         pla  Parvibaculum lavamentivorans
  6/307
       Pyruvatibacter (1)
         pmob  Pyruvatibacter mobilis
  2/307
       Unclassified Rhodobiaceae (1)
         rbs  Rhodobiaceae bacterium SMS8
  2/307
       Sinorhizobium (15)
         sme  Sinorhizobium meliloti 1021
         smk  Sinorhizobium meliloti AK83
         smq  Sinorhizobium meliloti BL225C
         smx  Sinorhizobium meliloti SM11
         smi  Sinorhizobium meliloti Rm41
         smeg  Sinorhizobium meliloti GR4
         smel  Sinorhizobium meliloti 2011
         smer  Sinorhizobium meliloti RMO17
         smd  Sinorhizobium medicae
         rhi  Sinorhizobium fredii NGR234
         sfh  Sinorhizobium fredii HH103
         sfd  Sinorhizobium fredii USDA 257
         six  Sinorhizobium sp. RAC02
         same  Sinorhizobium americanum
         sino  Sinorhizobium sp. CCBAU 05631
  3/307
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  2/307
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       Ensifer (4)
         ead  Ensifer adhaerens OV14
         eah  Ensifer adhaerens Casida A
         esj  Ensifer sojae
         eak  Ensifer alkalisoli
  3/307
  3/307
  3/307
  3/307
       Agrobacterium (10)
         atu  Agrobacterium fabrum
         ara  Agrobacterium radiobacter
         atf  Agrobacterium tumefaciens Ach5
         ata  Agrobacterium tumefaciens S33
         avi  Agrobacterium vitis
         agr  Agrobacterium sp. H13-3
         agc  Agrobacterium sp. RAC06
         aro  Agrobacterium rhizogenes
         agt  Agrobacterium sp. 33MFTa1.1
         alf  Agrobacterium larrymoorei
  3/307
  3/307
  3/307
  3/307
  3/307
  3/307
  3/307
  3/307
  3/307
  3/307
       Rhizobium (26)
         ret  Rhizobium etli CFN 42
         rec  Rhizobium etli CIAT 652
         rel  Rhizobium etli bv. mimosae Mim1
         rep  Rhizobium etli bv. phaseoli IE4803
         rei  Rhizobium sp. IE4771
         rle  Rhizobium leguminosarum bv. viciae 3841
         rlt  Rhizobium leguminosarum bv. trifolii WSM2304
         rlg  Rhizobium leguminosarum bv. trifolii WSM1325
         rlb  Rhizobium leguminosarum bv. trifolii WSM1689
         rlu  Rhizobium leguminosarum bv. trifolii CB782
         rtr  Rhizobium tropici
         rir  Rhizobium sp. IRBG74
         rhl  Rhizobium favelukesii
         rga  Rhizobium gallicum
         rhn  Rhizobium sp. N1341
         rpha  Rhizobium phaseoli
         rht  Rhizobium sp. NT-26
         rhx  Rhizobium sp. N731
         rhv  Rhizobium sp. S41
         rhk  Rhizobium sp. Kim5
         rez  Rhizobium esperanzae
         rjg  Rhizobium jaguaris
         rhr  Rhizobium sp. 11515TR
         rgr  Rhizobium grahamii
         rad  Rhizobium acidisoli
         rpus  Rhizobium pusense
 11/307
  3/307
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       Neorhizobium (4)
         ngl  Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141
         ngg  Neorhizobium galegae bv. orientalis HAMBI 540
         neo  Neorhizobium sp. SOG26
         nen  Neorhizobium sp. NCHU2750
  3/307
  3/307
  3/307
  3/307
       Liberibacter (7)
       Shinella (1)
         shz  Shinella sp. HZN7
  3/307
       Georhizobium (1)
         abaw  Georhizobium profundi
  3/307
       Brucella (44)
         bme  Brucella melitensis bv. 1 16M
         bmel  Brucella melitensis bv. 1 16M
         bmi  Brucella melitensis ATCC 23457
         bmz  Brucella melitensis M28
         bmg  Brucella melitensis M5-90
         bmw  Brucella melitensis NI
         bmee  Brucella melitensis bv. 3 Ether
         bmf  Brucella abortus 2308
         bmb  Brucella abortus bv. 1 9-941
         bmc  Brucella abortus S19
         baa  Brucella abortus A13334
         babo  Brucella abortus bv. 2 86/8/59
         babr  Brucella abortus bv. 6 870
         babt  Brucella abortus 63 75
         babb  Brucella abortus BDW
         babu  Brucella abortus bv. 9 C68
         babs  Brucella abortus BER
         babc  Brucella abortus NCTC 10505
         bms  Brucella suis 1330
         bsi  Brucella suis 1330
         bsf  Brucella suis bv. 1
         bsui  Brucella suis bv. 2 Bs143CITA
         bsup  Brucella suis bv. 2 PT09143
         bsuv  Brucella suis bv. 2 PT09172
         bsuc  Brucella suis bv. 2 Bs364CITA
         bmt  Brucella suis ATCC 23445
         bsz  Brucella suis bv. 3
         bsv  Brucella suis VBI22
         bsw  Brucella suis ZW043
         bsg  Brucella suis ZW046
         bov  Brucella ovis
         bcs  Brucella canis ATCC 23365
         bsk  Brucella canis HSK A52141
         bol  Brucella canis Oliveri
         bcar  Brucella canis RM6/66
         bcas  Brucella canis SVA13
         bmr  Brucella microti
         bpp  Brucella pinnipedialis B2/94
         bpv  Brucella pinnipedialis 6/566
         bcet  Brucella ceti TE10759-12
         bcee  Brucella ceti TE28753-12
         bvl  Brucella vulpis
         bru  Brucella sp. 2002734562
         brj  Brucella sp. 09RB8471
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       Ochrobactrum (4)
         oan  Ochrobactrum anthropi ATCC 49188
         oah  Ochrobactrum anthropi OAB
         ops  Ochrobactrum pseudogrignonense
         och  Ochrobactrum sp. A44
  3/307
  3/307
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       Bradyrhizobium (18)
         bja  Bradyrhizobium diazoefficiens USDA 110
         bju  Bradyrhizobium japonicum USDA 6
         bjp  Bradyrhizobium japonicum E109
         bra  Bradyrhizobium sp. ORS 278
         bbt  Bradyrhizobium sp. BTAi1
         brs  Bradyrhizobium sp. S23321
         aol  Bradyrhizobium oligotrophicum
         brc  Bradyrhizobium sp. CCGE-LA001
         brad  Bradyrhizobium sp. BF49
         bic  Bradyrhizobium icense
         bro  Bradyrhizobium sp. ORS 285
         brk  Bradyrhizobium sp. SK17
         bot  Bradyrhizobium ottawaense
         brq  Bradyrhizobium amphicarpaeae
         bgq  Bradyrhizobium guangdongense
         bgz  Bradyrhizobium guangzhouense
         bsym  Bradyrhizobium symbiodeficiens
         bbet  Bradyrhizobium betae
 11/307
 11/307
 11/307
 11/307
  3/307
 15/307
  3/307
 15/307
 11/307
  3/307
  3/307
 15/307
 11/307
 15/307
 11/307
 11/307
 15/307
 11/307
       Rhodopseudomonas (7)
         rpa  Rhodopseudomonas palustris CGA009
         rpb  Rhodopseudomonas palustris HaA2
         rpc  Rhodopseudomonas palustris BisB18
         rpd  Rhodopseudomonas palustris BisB5
         rpe  Rhodopseudomonas palustris BisA53
         rpt  Rhodopseudomonas palustris TIE-1
         rpx  Rhodopseudomonas palustris DX-1
  2/307
  6/307
  2/307
  6/307
  2/307
  2/307
  2/307
       Nitrobacter (2)
         nwi  Nitrobacter winogradskyi
         nha  Nitrobacter hamburgensis
  3/307
  3/307
       Oligotropha (3)
         oca  Oligotropha carboxidovorans OM5 (Mississippi)
         ocg  Oligotropha carboxidovorans OM5 (Goettingen)
         oco  Oligotropha carboxidovorans OM4
  3/307
  3/307
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       Bosea (5)
         bop  Bosea sp. PAMC 26642
         bos  Bosea sp. RAC05
         bvv  Bosea vaviloviae
         boi  Bosea sp. Tri-49
         bof  Bosea sp. F3-2
 11/307
 11/307
 11/307
 11/307
  3/307
       Variibacter (1)
         vgo  Variibacter gotjawalensis
  3/307
       Bartonella (23)
         bapi  Bartonella apis
  2/307
       Xanthobacter (1)
         xau  Xanthobacter autotrophicus
  7/307
       Azorhizobium (1)
         azc  Azorhizobium caulinodans
  3/307
       Starkeya (1)
         sno  Starkeya novella
  2/307
       Labrys (1)
         lne  Labrys neptuniae
  2/307
       Ancylobacter (2)
         anc  Ancylobacter sp. TS-1
         apra  Ancylobacter pratisalsi
  2/307
  2/307
       Methylorubrum (6)
         mea  Methylorubrum extorquens AM1
         mdi  Methylorubrum extorquens DM4
         mex  Methylorubrum extorquens PA1
         mch  Methylorubrum extorquens CM4
         mpo  Methylorubrum populi
         mza  Methylorubrum zatmanii
  3/307
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       Methylobacterium (14)
         mrd  Methylobacterium radiotolerans
         met  Methylobacterium sp. 4-46
         mno  Methylobacterium nodulans
         mor  Methylobacterium oryzae
         meta  Methylobacterium sp. AMS5
         maqu  Methylobacterium aquaticum
         mphy  Methylobacterium phyllosphaerae
         mee  Methylobacterium currus
         metd  Methylobacterium sp. DM1
         metx  Methylobacterium sp. XJLW
         mets  Methylobacterium durans
         meti  Methylobacterium sp. 17Sr1-43
         mmes  Methylobacterium mesophilicum
         mtea  Methylobacterium terrae
  3/307
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       Microvirga (3)
         moc  Microvirga ossetica
         miv  Microvirga sp. 17 mud 1-3
         mico  Microvirga sp. HR1
 11/307
  2/307
  2/307
       Beijerinckia (1)
         bid  Beijerinckia indica
  3/307
       Methylocella (2)
         msl  Methylocella silvestris
         mtun  Methylocella tundrae
  3/307
  3/307
       Methylovirgula (1)
         mlg  Methylovirgula ligni
  3/307
       Unclassified Beijerinckiaceae (1)
         bbar  Beijerinckiaceae bacterium RH AL1
  3/307
       Chelatococcus (2)
         chel  Chelatococcus sp. CO-6
         cdq  Chelatococcus daeguensis
  2/307
  2/307
       Hyphomicrobium (4)
         hdn  Hyphomicrobium denitrificans ATCC 51888
         hdt  Hyphomicrobium denitrificans 1NES1
         hmc  Hyphomicrobium sp. MC1
         hni  Hyphomicrobium nitrativorans
  2/307
  2/307
  3/307
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       Rhodomicrobium (1)
         rva  Rhodomicrobium vannielii
  2/307
       Pelagibacterium (1)
       Filomicrobium (2)
         fil  Candidatus Filomicrobium marinum W
         fiy  Candidatus Filomicrobium marinum Y
  2/307
  2/307
       Devosia (3)
         dei  Devosia sp. I507
  2/307
       Blastochloris (2)
         bvr  Blastochloris viridis
         blag  Blastochloris sp. GI
  2/307
 10/307
       Rhodoplanes (1)
         rhz  Rhodoplanes sp. Z2-YC6860
  3/307
       Maritalea (1)
       Youhaiella (1)
       Methylocystis (5)
         msc  Methylocystis sp. SC2
         mbry  Methylocystis bryophila
         mros  Methylocystis rosea
         mhey  Methylocystis heyeri
         mpar  Methylocystis parvus
 10/307
  2/307
  2/307
  2/307
  2/307
       Methylosinus (1)
         mtw  Methylosinus trichosporium
  2/307
       Pleomorphomonas (1)
         pleo  Pleomorphomonas sp. SM30
  3/307
       Martelella (3)
         mey  Martelella endophytica
         maad  Martelella sp. AD-3
         mmed  Martelella mediterranea
  3/307
  3/307
  3/307
       Aureimonas (1)
         aua  Aureimonas sp. AU20
  3/307
       Breoghania (1)
         brn  Breoghania sp. L-A4
  3/307
       Hodgkinia (4)
       Methyloceanibacter (1)
         mcg  Methyloceanibacter caenitepidi
 11/307
       Tokpelaia (1)
       Pseudorhodoplanes (1)
         psin  Pseudorhodoplanes sinuspersici
  3/307
       Hartmannibacter (1)
         hdi  Hartmannibacter diazotrophicus
  3/307
       Nordella (1)
       Methyloligella (1)
       Unclassified Rhizobiales (1)
         rbm  Rhizobiales bacterium NRL2
  2/307
       Caulobacter (8)
         ccr  Caulobacter vibrioides CB15
         ccs  Caulobacter vibrioides NA1000
         cak  Caulobacter sp. K31
         cse  Caulobacter segnis
         chq  Caulobacter henricii
         cmb  Caulobacter mirabilis
         cfh  Caulobacter flavus
         cauf  Caulobacter sp. FWC26
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 15/307
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 12/307
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       Phenylobacterium (2)
         pzu  Phenylobacterium zucineum
         phb  Phenylobacterium sp. HYN0004
  3/307
  2/307
       Brevundimonas (10)
         bsb  Brevundimonas subvibrioides
         brg  Brevundimonas sp. GW460-12-10-14-LB2
         brl  Brevundimonas sp. LM2
         bvc  Brevundimonas vesicularis
         brf  Brevundimonas sp. MF30-B
         brev  Brevundimonas sp. SGAir0440
  2/307
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       Asticcacaulis (1)
       Unclassified Caulobacteraceae (1)
       Ruegeria (4)
         sil  Ruegeria pomeroyi
         sit  Ruegeria sp. TM1040
         rua  Ruegeria sp. AD91A
         rut  Ruegeria sp. THAF33
  3/307
  2/307
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  2/307
       Epibacterium (1)
         rmb  Epibacterium mobile
  2/307
       Rhodobacter (7)
       Jannaschia (1)
         jan  Jannaschia sp. CCS1
 10/307
       Roseobacter (3)
         rpon  Roseobacter ponti
  2/307
       Paracoccus (13)
         pami  Paracoccus aminophilus
         pye  Paracoccus yeei
         pzh  Paracoccus zhejiangensis
         paro  Paracoccus sp. BM15
  2/307
  2/307
  2/307
  2/307
       Dinoroseobacter (1)
         dsh  Dinoroseobacter shibae
  2/307
       Ketogulonicigenium (3)
       Pseudovibrio (1)
         psf  Pseudovibrio sp. FO-BEG1
  3/307
       Phaeobacter (6)
         pga  Phaeobacter inhibens DSM 17395
         pgl  Phaeobacter inhibens 2.10
         pgd  Phaeobacter gallaeciensis DSM 26640
         php  Phaeobacter porticola
         ppic  Phaeobacter piscinae
         phq  Phaeobacter sp. LSS9
  2/307
  2/307
  2/307
  2/307
  2/307
  2/307
       Octadecabacter (4)
       Leisingera (3)
         lmd  Leisingera methylohalidivorans
         lej  Leisingera sp. NJS204
         laqu  Leisingera aquaemixtae
  3/307
  2/307
  2/307
       Roseibacterium (1)
         red  Roseibacterium elongatum
  2/307
       Planktomarina (1)
       Celeribacter (4)
         cid  Celeribacter indicus
         ceh  Celeribacter ethanolicus
         cmag  Celeribacter manganoxidans
  2/307
  2/307
  2/307
       Marinovum (1)
         malg  Marinovum algicola
  2/307
       Confluentimicrobium (1)
       Rhodovulum (3)
         rsu  Rhodovulum sulfidophilum
         rhm  Rhodovulum sp. MB263
         rhc  Rhodovulum sp. P5
  2/307
  2/307
  2/307
       Pannonibacter (1)
         pphr  Pannonibacter phragmitetus
  3/307
       Halocynthiibacter (1)
         hat  Halocynthiibacter arcticus
  2/307
       Labrenzia (5)
         lap  Labrenzia sp. CP4
         lagg  Labrenzia aggregata
         labr  Labrenzia sp. VG12
         labp  Labrenzia sp. PHM005
         labt  Labrenzia sp. THAF35
  3/307
  3/307
  3/307
  3/307
  3/307
       Defluviimonas (1)
       Yangia (2)
         ypac  Yangia pacifica
  2/307
       Sulfitobacter (6)
         suam  Sulfitobacter sp. AM1-D1
         spse  Sulfitobacter pseudonitzschiae
         suld  Sulfitobacter sp. D7
  2/307
  6/307
  6/307
       Donghicola (1)
       Salipiger (1)
       Tateyamaria (1)
         tom  Tateyamaria omphalii
  2/307
       Pelagibaca (1)
       Thioclava (1)
       Roseovarius (5)
       Yoonia (1)
       Antarctobacter (1)
         aht  Antarctobacter heliothermus
  2/307
       Rhodobaca (1)
       Sagittula (1)
       Thalassococcus (1)
         thaa  Thalassococcus sp. S3
  2/307
       Gemmobacter (1)
       Tabrizicola (1)
       Silicimonas (1)
       Sedimentitalea (1)
       Haematobacter (1)
         hml  Haematobacter massiliensis
  2/307
       Boseongicola (1)
         boo  Boseongicola sp. CCM32
  2/307
       Pseudorhodobacter (1)
       Litoreibacter (1)
       Oceanicola (1)
       Maribius (1)
       Roseivivax (1)
       Paraoceanicella (1)
         ppru  Paraoceanicella profunda
  2/307
       Stappia (1)
         siw  Stappia indica
 11/307
       Fluviibacterium (1)
         faq  Fluviibacterium aquatile
  2/307
       Halovulum (1)
         hdh  Halovulum dunhuangense
  3/307
       Pseudohalocynthiibacter (1)
       Monaibacterium (1)
         mon  Monaibacterium sp. ALG8
  2/307
       Mameliella (1)
         malu  Mameliella alba
  2/307
       Thalassobius (1)
         tgl  Thalassobius gelatinovorus
  2/307
       Unclassified Rhodobacteraceae (2)
         thas  Rhodobacteraceae bacterium SH-1
  2/307
       Maricaulis (1)
         mmr  Maricaulis maris
  9/307
       Hyphomonas (1)
       Hirschia (1)
       Glycocaulis (1)
         gak  Glycocaulis alkaliphilus
  9/307
       Hyphomonadaceae (1)
         hbc  Hyphomonadaceae bacterium UKL13-1
 10/307
       Zymomonas (8)
       Novosphingobium (10)
         nar  Novosphingobium aromaticivorans
         npp  Novosphingobium sp. PP1Y
         npn  Novosphingobium pentaromativorans
         nre  Novosphingobium resinovorum
         nov  Novosphingobium sp. P6W
         ntd  Novosphingobium tardaugens
         nor  Novosphingobium sp. ABRDHK2
         ngf  Novosphingobium ginsenosidimutans
         nog  Novosphingobium sp. Gsoil 351
  2/307
  3/307
  3/307
  3/307
  3/307
 13/307
  3/307
  2/307
 11/307
       Sphingopyxis (12)
         sal  Sphingopyxis alaskensis
         sphk  Sphingopyxis fribergensis
         sphp  Sphingopyxis sp. 113P3
         smag  Sphingopyxis macrogoltabida EY-1
         smaz  Sphingopyxis macrogoltabida 203
         ster  Sphingopyxis terrae
         sgi  Sphingopyxis granuli
         sphl  Sphingopyxis sp. LPB0140
         sphq  Sphingopyxis sp. QXT-31
         spho  Sphingopyxis sp. MG
         sphx  Sphingopyxis sp. PAMC25046
         sphu  Uncultured Sphingopyxis sp. UC10
  3/307
  3/307
  3/307
  3/307
  3/307
  3/307
  3/307
 10/307
  3/307
  3/307
  3/307
  3/307
       Sphingomonas (17)
         swi  Sphingomonas wittichii
         sphd  Sphingomonas wittichii DC-6
         sphm  Sphingomonas sp. MM-1
         stax  Sphingomonas taxi
         sphi  Sphingomonas hengshuiensis
         ssan  Sphingomonas sanxanigenens
         snj  Sphingomonas sp. NIC1
         smy  Sphingomonas melonis
         span  Sphingomonas panacis
         skr  Sphingomonas koreensis
         splm  Sphingomonas sp. LM7
         splk  Sphingomonas sp. LK11
         spkc  Sphingomonas sp. KC8
         sphc  Sphingomonas sp. Cra20
         sphf  Sphingomonas sp. FARSPH
         spha  Sphingomonas sp. YZ-8
         spau  Sphingomonas paucimobilis
  7/307
  3/307
  2/307
  3/307
  2/307
  2/307
  2/307
  2/307
  2/307
  3/307
  2/307
  3/307
  3/307
  2/307
  2/307
  3/307
  2/307
       Sphingobium (15)
         sjp  Sphingobium japonicum
         sch  Sphingobium chlorophenolicum
         ssy  Sphingobium sp. SYK-6
         syb  Sphingobium sp. YBL2
         spmi  Sphingobium sp. MI1205
         sphb  Sphingobium sp. EP60837
         sphr  Sphingobium sp. RAC03
         sinb  Sphingobium indicum
         spht  Sphingobium sp. TKS
         shyd  Sphingobium hydrophobicum
         sya  Sphingobium yanoikuyae
         spyg  Sphingobium sp. YG1
         sufl  Sphingobium fuliginis
  2/307
  3/307
  3/307
  3/307
  3/307
  2/307
  3/307
  2/307
  2/307
  2/307
  2/307
  2/307
  2/307
       Citromicrobium (1)
         cij  Citromicrobium sp. JL477
  2/307
       Sphingorhabdus (3)
         sphg  Sphingorhabdus sp. M41
         sfla  Sphingorhabdus sp. SMR4y
         sphy  Sphingorhabdus sp. YGSMI21
 11/307
 11/307
 11/307
       Blastomonas (2)
         blas  Blastomonas sp. RAC04
         bfw  Blastomonas fulva
  2/307
  2/307
       Rhizorhabdus (1)
         rdi  Rhizorhabdus dicambivorans
  3/307
       Sphingosinicella (2)
         smic  Sphingosinicella microcystinivorans
         sphs  Sphingosinicella sp. BN140058
  6/307
  2/307
       Tardibacter (1)
         sphj  Tardibacter chloracetimidivorans
  3/307
       Sphingosinithalassobacter (1)
       Hankyongella (1)
       Erythrobacter (8)
         eli  Erythrobacter litoralis HTCC2594
         elq  Erythrobacter litoralis DSM 8509
         ery  Erythrobacter atlanticus
         egn  Erythrobacter gangjinensis
         efv  Erythrobacter flavus
         erk  Erythrobacter sp. KY5
         err  Erythrobacter sp. YH-07
         erf  Erythrobacter sp. THAF29
  3/307
  2/307
  3/307
  3/307
  3/307
  3/307
  3/307
  3/307
       Altererythrobacter (7)
         aay  Altererythrobacter atlanticus
         amx  Altererythrobacter marensis
         aep  Altererythrobacter epoxidivorans
         anh  Altererythrobacter namhicola
         ado  Altererythrobacter dongtanensis
         alb  Altererythrobacter sp. B11
         alh  Altererythrobacter sp. BO-6
  3/307
  3/307
  3/307
  3/307
  2/307
  3/307
  2/307
       Croceicoccus (2)
         cna  Croceicoccus naphthovorans
         cman  Croceicoccus marinus
  3/307
  3/307
       Porphyrobacter (4)
         pns  Porphyrobacter neustonensis
         porl  Porphyrobacter sp. LM 6
         phz  Porphyrobacter sp. HT-58-2
         pot  Porphyrobacter sp. YT40
  3/307
  3/307
  2/307
  3/307
       Gluconobacter (5)
       Granulobacter (4)
         gbh  Granulibacter bethesdensis CGDNIH2
         gbc  Granulibacter bethesdensis NIH3.1
         gbs  Granulibacter bethesdensis CGDNIH4
  2/307
  2/307
  2/307
       Acidiphilium (2)
         acr  Acidiphilium cryptum
         amv  Acidiphilium multivorum
  2/307
  2/307
       Gluconacetobacter (2)
         gdi  Gluconacetobacter diazotrophicus PA1 5 (Brazil)
         gdj  Gluconacetobacter diazotrophicus PA1 5 (JGI)
  2/307
  2/307
       Komagataeibacter (6)
         ksc  Komagataeibacter saccharivorans
  2/307
       Acetobacter (19)
         apt  Acetobacter pasteurianus IFO 3283-01
         apw  Acetobacter pasteurianus IFO 3283-01-42C
         apf  Acetobacter pasteurianus IFO 3283-03
         apu  Acetobacter pasteurianus IFO 3283-07
         apg  Acetobacter pasteurianus IFO 3283-12
         apq  Acetobacter pasteurianus IFO 3283-22
         apx  Acetobacter pasteurianus IFO 3283-26
         apz  Acetobacter pasteurianus IFO 3283-32
         apk  Acetobacter pasteurianus 386B
         asz  Acetobacter senegalensis
         asv  Acetobacter oryzifermentans
         apom  Acetobacter pomorum
         ato  Acetobacter tropicalis
         acet  Acetobacter sp. JWB
         aoy  Acetobacter oryzoeni
  2/307
  2/307
  2/307
  2/307
  2/307
  2/307
  2/307
  2/307
  2/307
  2/307
  2/307
  2/307
  2/307
  2/307
  2/307
       Asaia (1)
       Kozakia (1)
       Roseomonas (3)
         rgi  Roseomonas gilardii
         ros  Roseomonas sp. FDAARGOS_362
         rmuc  Roseomonas mucosa
  2/307
  2/307
  2/307
       Neoasaia (1)
       Commensalibacter (2)
       Stella (2)
         shum  Stella humosa
         svc  Stella vacuolata
  2/307
  2/307
       Neokomagataea (2)
       Swingsia (2)
       Bombella (2)
       Rhodospirillum (3)
         rru  Rhodospirillum rubrum ATCC 11170
         rrf  Rhodospirillum rubrum F11
         rce  Rhodospirillum centenum
  2/307
  2/307
 10/307
       Pararhodospirillum (1)
         rpm  Pararhodospirillum photometricum
  2/307
       Magnetospirillum (5)
         mag  Magnetospirillum magneticum
         mgy  Magnetospirillum gryphiswaldense MSR-1 v2
         mgry  Magnetospirillum gryphiswaldense MSR-1
         magx  Magnetospirillum sp. XM-1
         magn  Magnetospirillum sp. ME-1
  2/307
  2/307
  2/307
  2/307
  2/307
       Azospirillum (10)
         azl  Azospirillum sp. B510
         ali  Azospirillum lipoferum
         abs  Azospirillum brasilense Sp245
         abq  Azospirillum brasilense Az39
         abf  Azospirillum brasilense Sp7
         ati  Azospirillum thiophilum
         ahu  Azospirillum humicireducens
         azt  Azospirillum sp. TSH58
         azm  Azospirillum sp. M2T2B2
         azz  Azospirillum sp. CFH 70021
  6/307
  2/307
  2/307
  2/307
  2/307
  2/307
  2/307
  2/307
  2/307
  2/307
       Tistrella (1)
         tmo  Tistrella mobilis
 13/307
       Endolissoclinum (2)
       Thalassospira (3)
         txi  Thalassospira xiamenensis
         thac  Thalassospira marina
         tii  Thalassospira indica
  2/307
 10/307
  2/307
       Magnetospira (1)
         magq  Magnetospira sp. QH-2
  2/307
       Haematospirillum (1)
         hjo  Haematospirillum jordaniae
  2/307
       Nitrospirillum (1)
         nao  Nitrospirillum amazonense
 11/307
       Niveispirillum (1)
         ncb  Niveispirillum cyanobacteriorum
 11/307
       Ferrovibrio (1)
         fer  Ferrovibrio terrae
  6/307
       Hypericibacter (2)
         htq  Hypericibacter terrae
         hadh  Hypericibacter adhaerens
  2/307
  2/307
       Parvularcula (1)
       Magnetococcus (1)
       Pelagibacter (3)
       Unclassified Pelagibacteraceae (2)
       Emcibacter (1)
         ecog  Emcibacter congregatus
  2/307
       Micavibrio (2)
       Polymorphum (1)
         pgv  Polymorphum gilvum
  3/307
       Phreatobacter (2)
         phr  Phreatobacter cathodiphilus
         pstg  Phreatobacter stygius
  7/307
  3/307
       Puniceispirillum (1)
     Oligoflexia (12)
       Bdellovibrio (8)
         bba  Bdellovibrio bacteriovorus HD100
         bbat  Bdellovibrio bacteriovorus Tiberius
         bbw  Bdellovibrio bacteriovorus W
         bbac  Bdellovibrio bacteriovorus 109J
         bex  Bdellovibrio exovorus
         bdq  Bdellovibrio sp. qaytius
         bdc  Bdellovibrio sp. NC01
         bdz  Bdellovibrio sp. ZAP7
  9/307
  9/307
  9/307
  9/307
  9/307
  9/307
  9/307
  9/307
       Halobacteriovorax (2)
         bmx  Halobacteriovorax marinus
         hax  Halobacteriovorax sp. BALOs_7
 10/307
 10/307
       Bacteriovorax (1)
         bsto  Bacteriovorax stolpii
  9/307
       Unclassified Silvanigrellales (1)
     Other proteobacteria (10)
       Acidithiobacillus (7)
       Mariprofundus (2)
       Hydrogenophilus (1)
         htl  Hydrogenophilus thermoluteolus
  2/307
     Firmicutes - Bacilli (815)
       Bacillus (140)
         bcz  Bacillus cereus E33L
         bcg  Bacillus cereus G9842
         bti  Bacillus thuringiensis HD-771
         btht  Bacillus thuringiensis serovar thuringiensis IS5056
         bthu  Bacillus thuringiensis YBT-1518
         bwe  Bacillus mycoides KBAB4
         bww  Bacillus mycoides WSBC 10204
         bwd  Bacillus wiedmannii
         baci  Bacillus sp. 1NLA3E
         bon  Bacillus oceanisediminis
         bacq  Bacillus sp. Y1
  6/307
  6/307
  6/307
  6/307
  6/307
  6/307
  6/307
  6/307
  6/307
  6/307
  6/307
       Oceanobacillus (3)
       Geobacillus (18)
       Parageobacillus (3)
       Anoxybacillus (6)
       Amphibacillus (1)
       Lysinibacillus (8)
       Halobacillus (3)
       Terribacillus (1)
       Virgibacillus (7)
       Lentibacillus (1)
       Fictibacillus (2)
       Salimicrobium (1)
       Aeribacillus (1)
       Aquibacillus (1)
       Psychrobacillus (2)
       Pradoshia (1)
       Gracilibacillus (1)
       Salicibibacter (2)
       Pontibacillus (1)
       Sporolactobacillus (1)
       Unclassified Sporolactobacillaceae (1)
       Staphylococcus (92)
       Macrococcus (3)
       Salinicoccus (1)
       Auricoccucs (1)
       Listeria (47)
       Brochothrix (1)
       Exiguobacterium (5)
         esi  Exiguobacterium sibiricum
         ean  Exiguobacterium antarcticum
         exm  Exiguobacterium sp. MH3
         exu  Exiguobacterium sp. U13-1
  6/307
  6/307
  6/307
  6/307
       Gemella (5)
       Brevibacillus (5)
       Paenibacillus (48)
         pms  Paenibacillus mucilaginosus KNP414
         pmq  Paenibacillus mucilaginosus 3016
         pmw  Paenibacillus mucilaginosus K02
         ppsc  Paenibacillus psychroresistens
  7/307
  7/307
  7/307
  7/307
       Thermobacillus (1)
       Aneurinibacillus (2)
         anx  Aneurinibacillus sp. XH2
         asoc  Aneurinibacillus soli
  7/307
  6/307
       Cohnella (2)
       Saccharibacillus (1)
       Alicyclobacillus (2)
       Kyrpidia (2)
         bts  Kyrpidia tusciae
  6/307
       Tumebacillus (2)
         tum  Tumebacillus avium
         tab  Tumebacillus algifaecis
  6/307
  7/307
       Solibacillus (3)
       Planococcus (11)
         pku  Planococcus kocurii
         pll  Planococcus versutus
         pfae  Planococcus faecalis
 11/307
  7/307
  7/307
       Jeotgalibacillus (1)
       Kurthia (2)
       Sporosarcina (6)
         spop  Sporosarcina sp. P37
  4/307
       Rummeliibacillus (1)
         rst  Rummeliibacillus stabekisii
 11/307
       Paenisporosarcina (2)
         panc  Paenisporosarcina antarctica
  6/307
       Planomicrobium (2)
       Novibacillus (1)
       Laceyella (1)
       Thermoactinomyces (1)
       Kroppenstedtia (2)
       Lactococcus (19)
       Streptococcus (148)
       Lactobacillus (101)
         lkl  Lactobacillus kullabergensis
  2/307
       Pediococcus (6)
       Enterococcus (23)
       Melissococcus (2)
       Tetragenococcus (4)
       Vagococcus (5)
       Oenococcus (3)
       Leuconostoc (13)
       Weissella (11)
       Aerococcus (7)
       Abiotrophia (1)
       Unclassified Aerococcaceae (1)
       Carnobacterium (6)
       Marinilactibacillus (1)
       Jeotgalibaca (5)
       Dolosigranulum (1)
     Firmicutes - Clostridia (231)
       Clostridium (54)
       Alkaliphilus (2)
       Arthromitus (4)
       Geosporobacter (1)
       Hathewaya (1)
       Caloramator (1)
       Crassaminicella (1)
       Caloranaerobacter (1)
       Mageeibacillus (1)
       Fastidiosipila (1)
       Hungateiclostridium (4)
       Unclassified Hungateiclostridiaceae (1)
       Ruminiclostridium (1)
       Thermoclostridium (2)
       Pseudoclostridium (1)
       Unclassified Ruminococcaceae (4)
       Flavonifractor (1)
       Ethanoligenens (1)
       Ruminococcus (5)
       Faecalibacterium (2)
       Caproiciproducens (1)
       Butyrivibrio (3)
       Cellulosilyticum (2)
       Roseburia (3)
       Coprococcus (2)
       Blautia (6)
       Lachnoclostridium (3)
       Lacrimispora (2)
       Anaerostipes (2)
       Herbinix (1)
       Anaerotignum (1)
       Lachnoanaerobaculum (1)
       Anaerobutyricum (1)
       Pseudobutyrivibrio (1)
       Anaerocolumna (1)
       Lachnospira (1)
       Mediterraneibacter (1)
       Enterocloster (1)
       Unclassified Lachnospiraceae (4)
       Clostridioides (5)
       Peptoclostridium (1)
       Acetoanaerobium (1)
       Filifactor (1)
       Paeniclostridium (1)
       Romboutsia (1)
       Peptacetobacter (1)
       Unclassified Peptostreptococcaceae (1)
       Symbiobacterium (1)
       Syntrophomonas (1)
       Syntrophothermus (1)
       Syntrophocurvum (1)
       Desulfitobacterium (5)
       Desulfotomaculum (4)
       Desulfofarcimen (1)
       Desulfofundulus (1)
       Desulfallas (1)
       Pelotomaculum (1)
       Desulforudis (1)
       Thermincola (1)
       Syntrophobotulus (1)
       Desulfosporosinus (3)
       Dehalobacter (3)
       Heliobacterium (1)
       Heliorestis (1)
       Eubacterium (3)
       Acetobacterium (1)
       Oscillibacter (1)
       Dysosmobacter (1)
       Thermaerobacter (3)
       Sulfobacillus (3)
         say  Sulfobacillus acidophilus TPY
         sap  Sulfobacillus acidophilus DSM 10332
         sthr  Sulfobacillus thermotolerans
  6/307
  6/307
  6/307
       Carboxydocella (1)
       Christensenella (1)
       Intestinimonas (1)
       Mogibacterium (1)
       Aminipila (3)
       Unclassified Clostridiales (4)
       Caldanaerobacter (1)
       Thermoanaerobacter (8)
       Carboxydothermus (1)
       Tepidanaerobacter (2)
       Moorella (3)
       Ammonifex (1)
       Thermacetogenium (1)
       Caldicellulosiruptor (9)
       Thermosediminibacter (1)
       Thermoanaerobacterium (4)
       Thermodesulfobium (2)
       Mahella (1)
       Natranaerobius (1)
       Halothermothrix (1)
       Halanaerobium (2)
       Halocella (1)
       Acetohalobium (1)
       Halobacteroides (1)
       Anoxybacter (1)
     Firmicutes - Others (46)
       Finegoldia (1)
       Anaerococcus (1)
       Parvimonas (1)
       Peptoniphilus (3)
       Gottschalkia (1)
       Sporanaerobacter (1)
       Veillonella (4)
       Megasphaera (3)
       Dialister (2)
       Selenomonas (5)
       Megamonas (2)
       Pelosinus (2)
       Methylomusa (1)
       Sporomusa (1)
       Acidaminococcus (2)
       Phascolarctobacterium (1)
       Erysipelothrix (5)
       Faecalitalea (1)
       Turicibacter (2)
       Faecalibaculum (1)
       Absiella (2)
       Erysipelatoclostridium (1)
       Unclassified Erysipelotrichaceae (2)
       Limnochorda (1)
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
     Tenericutes (157)
       Mycoplasma (97)
       Ureaplasma (4)
       Hepatoplasma (1)
       Phytoplasma (8)
       Acholeplasma (6)
       Mesoplasma (8)
       Entomoplasma (4)
       Spiroplasma (26)
       Izimaplasma (1)
       Unclassified Tenericutes (2)
 
 
 
 
 
 
 
 
 
 
     Actinobacteria (749)
       Mycobacterium (73)
         mtu  Mycobacterium tuberculosis H37Rv
         mtv  Mycobacterium tuberculosis H37Rv
         mtc  Mycobacterium tuberculosis CDC1551
         mra  Mycobacterium tuberculosis H37Ra
         mtf  Mycobacterium tuberculosis F11
         mtb  Mycobacterium tuberculosis KZN 1435
         mtk  Mycobacterium tuberculosis KZN 4207
         mtz  Mycobacterium tuberculosis KZN 605
         mtg  Mycobacterium tuberculosis RGTB327
         mti  Mycobacterium tuberculosis RGTB423
         mte  Mycobacterium tuberculosis CCDC5079
         mtur  Mycobacterium tuberculosis CCDC5079
         mtl  Mycobacterium tuberculosis CCDC5180
         mto  Mycobacterium tuberculosis CTRI-2
         mtd  Mycobacterium tuberculosis UT205
         mtn  Mycobacterium tuberculosis Erdman = ATCC 35801
         mtj  Mycobacterium tuberculosis Beijing/NITR203
         mtub  Mycobacterium tuberculosis 7199-99
         mtuc  Mycobacterium tuberculosis CAS/NITR204
         mtue  Mycobacterium tuberculosis EAI5/NITR206
         mtx  Mycobacterium tuberculosis EAI5
         mtuh  Mycobacterium tuberculosis Haarlem/NITR202
         mtul  Mycobacterium tuberculosis Haarlem
         mtut  Mycobacterium tuberculosis BT1
         mtuu  Mycobacterium tuberculosis BT2
         mtq  Mycobacterium tuberculosis HKBS1
         mbo  Mycobacterium tuberculosis variant bovis AF2122/97
         mbb  Mycobacterium tuberculosis variant bovis BCG Pasteur 1173P2
         mbt  Mycobacterium tuberculosis variant bovis BCG Tokyo 172
         mbm  Mycobacterium tuberculosis variant bovis BCG Mexico
         mbk  Mycobacterium tuberculosis variant bovis BCG Korea 1168P
         mbx  Mycobacterium tuberculosis variant bovis BCG ATCC 35743
         maf  Mycobacterium tuberculosis variant africanum
         mmic  Mycobacterium tuberculosis variant microti
         mce  Mycobacterium canettii CIPT 140010059
         mcq  Mycobacterium canettii CIPT 140060008
         mcv  Mycobacterium canettii CIPT 140070008
         mcx  Mycobacterium canettii CIPT 140070010
         mcz  Mycobacterium canettii CIPT 140070017
         mle  Mycobacterium leprae TN
         mlb  Mycobacterium leprae Br4923
         mpa  Mycobacterium avium subsp. paratuberculosis K-10
         mao  Mycobacterium avium subsp. paratuberculosis MAP4
         mavi  Mycobacterium avium subsp. paratuberculosis E1
         mavu  Mycobacterium avium subsp. paratuberculosis E93
         mav  Mycobacterium avium 104
         mit  Mycobacterium intracellulare MOTT-02
         mia  Mycobacterium intracellulare ATCC 13950
         mid  Mycobacterium intracellulare subsp. intracellulare
         myo  Mycobacterium intracellulare subsp. yongonense
         mir  Mycobacterium paraintracellulare
         mchi  Mycobacterium chimaera
         mmal  Mycobacterium marseillense
         mlp  Mycobacterium lepraemurium
         msa  Mycobacterium sp. JS623
         mul  Mycobacterium ulcerans
         mmc  Mycobacterium sp. MCS
         mkm  Mycobacterium sp. KMS
         mjl  Mycobacterium sp. JLS
         mmi  Mycobacterium marinum M
         mmae  Mycobacterium marinum E11
         mmm  Mycobacterium sp. MOTT36Y
         mli  Mycobacterium liflandii
         mkn  Mycobacterium kansasii ATCC 12478
         myv  Mycobacterium sp. VKM Ac-1817D
         mye  Mycobacterium sp. EPa45
         mhad  Mycobacterium haemophilum
         myn  Mycobacterium sp. NRRL B-3805
         mdx  Mycobacterium dioxanotrophicus
         mshg  Mycobacterium shigaense
         mfj  Mycobacterium florentinum
         mgro  Mycobacterium grossiae
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       Mycolicibacterium (21)
         msm  Mycolicibacterium smegmatis MC2 155
         msg  Mycolicibacterium smegmatis MC2 155
         msb  Mycolicibacterium smegmatis MC2 155
         msn  Mycolicibacterium smegmatis INHR1
         msh  Mycolicibacterium smegmatis INHR2
         mva  Mycolicibacterium vanbaalenii
         mgi  Mycolicibacterium gilvum PYR-GCK
         msp  Mycolicibacterium gilvum Spyr1
         mcb  Mycolicibacterium chubuense
         mne  Mycolicibacterium neoaurum
         mgo  Mycolicibacterium goodii
         mft  Mycolicibacterium fortuitum
         mphl  Mycolicibacterium phlei
         mvq  Mycolicibacterium vaccae
         mll  Mycolicibacterium litorale
         mrh  Mycolicibacterium rhodesiae
         mthn  Mycolicibacterium thermoresistibile
         mhas  Mycolicibacterium hassiacum
         mdu  Mycolicibacterium duvalii
         mcht  Mycolicibacterium chitae
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       Mycobacteroides (9)
         mab  Mycobacteroides abscessus ATCC 19977
         mmv  Mycobacteroides abscessus subsp. massiliense GO 06
         mabb  Mycobacteroides abscessus subsp. bolletii 50594
         mabl  Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300
         mche  Mycobacteroides chelonae
         miz  Mycobacteroides immunogenum
         mste  Mycobacterium stephanolepidis
         msao  Mycobacteroides saopaulense
         msal  Mycobacteroides salmoniphilum
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       Mycolicibacter (3)
         mjd  Mycolicibacter sinensis
         mter  Mycolicibacter terrae
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       Hoyosella (1)
         asd  Hoyosella subflava
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       Mycolicibacillus (1)
         mkr  Mycolicibacillus koreensis
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       Corynebacterium (100)
         cdi  Corynebacterium diphtheriae NCTC 13129
         cdp  Corynebacterium diphtheriae 241
         cdh  Corynebacterium diphtheriae INCA 402
         cdt  Corynebacterium diphtheriae HC01
         cde  Corynebacterium diphtheriae HC02
         cdr  Corynebacterium diphtheriae HC03
         cda  Corynebacterium diphtheriae HC04
         cdz  Corynebacterium diphtheriae 31A
         cdb  Corynebacterium diphtheriae BH8
         cds  Corynebacterium diphtheriae C7 (beta)
         cdd  Corynebacterium diphtheriae CDCE 8392
         cdw  Corynebacterium diphtheriae PW8
         cdv  Corynebacterium diphtheriae VA01
         cdip  Corynebacterium diphtheriae NCTC11397
         cjk  Corynebacterium jeikeium
         cur  Corynebacterium urealyticum DSM 7109
         cua  Corynebacterium urealyticum DSM 7111
         car  Corynebacterium aurimucosum
         cpl  Corynebacterium pseudotuberculosis 3/99-5
         cpg  Corynebacterium pseudotuberculosis 316
         cpp  Corynebacterium pseudotuberculosis P54B96
         cpk  Corynebacterium pseudotuberculosis 1002
         cpq  Corynebacterium pseudotuberculosis C231
         cpx  Corynebacterium pseudotuberculosis I19
         cpz  Corynebacterium pseudotuberculosis PAT10
         cor  Corynebacterium pseudotuberculosis 267
         cop  Corynebacterium pseudotuberculosis 31
         cod  Corynebacterium pseudotuberculosis 1/06-A
         cos  Corynebacterium pseudotuberculosis 42/02-A
         coi  Corynebacterium pseudotuberculosis CIP 52.97
         coe  Corynebacterium pseudotuberculosis 258
         cou  Corynebacterium pseudotuberculosis Cp162
         cpse  Corynebacterium pseudotuberculosis 48252
         cpsu  Corynebacterium pseudotuberculosis CS_10
         cpsf  Corynebacterium pseudotuberculosis Ft_2193/67
         crd  Corynebacterium resistens
         cul  Corynebacterium ulcerans BR-AD22
         cuc  Corynebacterium ulcerans 809
         cue  Corynebacterium ulcerans 0102
         cun  Corynebacterium ulcerans 210932
         cus  Corynebacterium ulcerans FRC11
         cuq  Corynebacterium ulcerans 210931
         cuz  Corynebacterium ulcerans 05146
         cuj  Corynebacterium ulcerans 131002
         cva  Corynebacterium variabile
         chn  Corynebacterium halotolerans
         caz  Corynebacterium argentoratense
         cfn  Corynebacterium falsenii
         cvt  Corynebacterium vitaeruminis
         cgy  Corynebacterium glyciniphilum
         coa  Corynebacterium sp. ATCC 6931
         cdo  Corynebacterium doosanense
         chm  Corynebacterium humireducens
         csx  Corynebacterium singulare
         cmq  Corynebacterium marinum
         ccj  Corynebacterium camporealensis
         cmv  Corynebacterium mustelae
         cei  Corynebacterium epidermidicanis
         cted  Corynebacterium testudinoris
         clw  Corynebacterium lactis
         csp  Corynebacterium simulans
         cfc  Corynebacterium flavescens
         cstr  Corynebacterium striatum
         caqu  Corynebacterium aquilae
         csph  Corynebacterium sphenisci
         cmin  Corynebacterium minutissimum
         cpeg  Corynebacterium pelargi
         cxe  Corynebacterium xerosis
         cee  Corynebacterium endometrii
         csan  Corynebacterium sanguinis
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       Nocardia (10)
         nfa  Nocardia farcinica IFM 10152
         nfr  Nocardia farcinica NCTC11134
         ncy  Nocardia cyriacigeorgica
         nbr  Nocardia brasiliensis
         nno  Nocardia nova
         nsl  Nocardia mangyaensis
         nsr  Nocardia seriolae
         ntp  Nocardia terpenica
         noz  Nocardia sp. CS682
         nod  Nocardia otitidiscaviarum
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       Rhodococcus (20)
         rha  Rhodococcus jostii
         rer  Rhodococcus erythropolis PR4
         rey  Rhodococcus erythropolis CCM2595
         reb  Rhodococcus erythropolis BG43
         rop  Rhodococcus opacus B4
         roa  Rhodococcus opacus PD630
         req  Rhodococcus hoagii
         rpy  Rhodococcus pyridinivorans
         rhb  Rhodococcus sp. B7740
         rav  Rhodococcus aetherivorans
         rfa  Rhodococcus fascians
         rhw  Rhodococcus sp. WMMA185
         rhs  Rhodococcus sp. PBTS 2
         rrz  Rhodococcus ruber
         rhu  Rhodococcus sp. PBTS 1
         rqi  Rhodococcus qingshengii
         rhq  Rhodococcus sp. p52
         rhod  Rhodococcus sp. 008
         rrt  Rhodococcus rhodochrous
         rby  Rhodococcus biphenylivorans
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       Gordonia (11)
         gbr  Gordonia bronchialis
         gpo  Gordonia polyisoprenivorans
         gor  Gordonia sp. KTR9
         goq  Gordonia phthalatica
         gta  Gordonia terrae
         goc  Gordonia sp. YC-JH1
         git  Gordonia iterans
         gru  Gordonia rubripertincta
         gom  Gordonia insulae
         gav  Gordonia alkanivorans
         god  Gordonia sp. 135
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       Tsukamurella (2)
         tpr  Tsukamurella paurometabola
         tsm  Tsukamurella tyrosinosolvens
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       Segniliparus (1)
         srt  Segniliparus rotundus
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       Dietzia (5)
         dtm  Dietzia timorensis
         dit  Dietzia sp. oral taxon 368
         diz  Dietzia sp. JS16-p6b
         dpc  Dietzia psychralcaliphila
         dlu  Dietzia lutea
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       Lawsonella (1)
       Tomitella (1)
         toy  Tomitella sp. HY188
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       Streptomyces (70)
         sco  Streptomyces coelicolor
         salb  Streptomyces albidoflavus
         sma  Streptomyces avermitilis
         sgr  Streptomyces griseus
         sgb  Streptomyces globisporus
         scb  Streptomyces scabiei
         ssx  Streptomyces sp. SirexAA-E
         svl  Streptomyces violaceusniger
         sct  Streptomyces cattleya NRRL 8057 = DSM 46488
         scy  Streptomyces cattleya NRRL 8057 = DSM 46488
         sfa  Streptomyces pratensis
         sbh  Streptomyces bingchenggensis
         shy  Streptomyces hygroscopicus subsp. jinggangensis 5008
         sho  Streptomyces hygroscopicus subsp. jinggangensis TL01
         sve  Streptomyces venezuelae
         sdv  Streptomyces davaonensis
         sals  Streptomyces albus DSM 41398
         strp  Streptomyces sp. PAMC 26508
         sfi  Streptomyces fulvissimus
         sci  Streptomyces collinus
         src  Streptomyces rapamycinicus
         salu  Streptomyces albulus NK660
         sall  Streptomyces albulus ZPM
         slv  Streptomyces lividans
         sgu  Streptomyces glaucescens
         svt  Streptomyces vietnamensis
         stre  Streptomyces sp. 769
         scw  Streptomyces cyaneogriseus
         sld  Streptomyces lydicus A02
         slc  Streptomyces lydicus 103
         sxi  Streptomyces xiamenensis
         strm  Streptomyces sp. Mg1
         strc  Streptomyces sp. CNQ-509
         samb  Streptomyces ambofaciens
         spri  Streptomyces pristinaespiralis
         scz  Streptomyces sp. CFMR 7
         scx  Streptomyces sp. CdTB01
         srw  Streptomyces reticuli
         strf  Streptomyces sp. 4F
         sle  Streptomyces leeuwenhoekii
         srn  Streptomyces rubrolavendulae
         spav  Streptomyces parvulus
         strt  Streptomyces sp. SAT1
         sclf  Streptomyces clavuligerus
         sgs  Streptomyces griseochromogenes
         stsi  Streptomyces qaidamensis
         sls  Streptomyces lincolnensis
         snr  Streptomyces noursei
         splu  Streptomyces pluripotens
         strd  Streptomyces sp. CCM_MD2014
         snw  Streptomyces niveus
         sauo  Streptomyces autolyticus
         ssia  Streptomyces alfalfae
         svu  Streptomyces violaceoruber
         spun  Streptomyces fodineus
         sgv  Streptomyces gilvosporeus
         smal  Streptomyces malaysiensis
         slau  Streptomyces laurentii
         salf  Streptomyces alboflavus
         salj  Streptomyces albireticuli
         slx  Streptomyces lavendulae subsp. lavendulae
         stro  Streptomyces sp. MOE7
         sfk  Streptomyces formicae
         snz  Streptomyces nigra
         sge  Streptomyces griseorubiginosus
         srj  Streptomyces rochei
         slk  Streptomyces lunaelactis
         sky  Streptomyces koyangensis
         sdx  Streptomyces dengpaensis
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       Kitasatospora (4)
         ksk  Kitasatospora setae
         kab  Kitasatospora albolonga
         kau  Kitasatospora aureofaciens
         kit  Kitasatospora sp. MMS16-BH015
 13/307
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       Streptacidiphilus (1)
         stri  Streptacidiphilus sp. DSM 106435
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       Tropheryma (2)
       Luteimicrobium (1)
         lxl  Luteimicrobium xylanilyticum
  6/307
       Leifsonia (3)
         lxx  Leifsonia xyli subsp. xyli CTCB07
         lxy  Leifsonia xyli subsp. cynodontis DSM 46306
         leif  Leifsonia sp. PS1209
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       Clavibacter (5)
         cmi  Clavibacter michiganensis subsp. michiganensis
         cms  Clavibacter michiganensis subsp. sepedonicus
         cmc  Clavibacter michiganensis subsp. nebraskensis
         cmh  Clavibacter michiganensis subsp. insidiosus
         ccap  Clavibacter michiganensis subsp. capsici
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       Microbacterium (17)
         mts  Microbacterium testaceum
         mim  Microbacterium sp. CGR1
         mio  Microbacterium sp. No. 7
         mix  Microbacterium sp. XT11
         mip  Microbacterium sp. PAMC 28756
         mcw  Microbacterium chocolatum
         mpal  Microbacterium paludicola
         mih  Microbacterium sp. BH-3-3-3
         micr  Microbacterium sp. 1.5R
         maur  Microbacterium aurum
         mhos  Microbacterium hominis
         mfol  Microbacterium foliorum
         moo  Microbacterium oleivorans
         mlv  Microbacterium lemovicicum
         mwa  Microbacterium wangchenii
         mprt  Microbacterium protaetiae
         msed  Microbacterium sediminis
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       Rhodoluna (2)
         rla  Rhodoluna lacicola
         rpla  Candidatus Rhodoluna planktonica
  6/307
  2/307
       Aquiluna (1)
         aqg  Aquiluna sp. 15G-AUS-rot
  6/307
       Rathayibacter (7)
         rtc  Rathayibacter toxicus WAC3373
         rtn  Rathayibacter tritici
         rry  Rathayibacter rathayi
         ria  Rathayibacter iranicus
         rfs  Rathayibacter festucae
         rte  Rathayibacter tanaceti
  4/307
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       Curtobacterium (4)
         cum  Curtobacterium sp. MR_MD2014
         cub  Curtobacterium sp. BH-2-1-1
         cug  Curtobacterium sp. SGAir0471
         cqf  Curtobacterium flaccumfaciens
  6/307
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       Microterricola (1)
       Frondihabitans (1)
         frp  Frondihabitans sp. PAMC 28766
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       Agromyces (3)
         agy  Agromyces aureus
         agm  Agromyces sp. MF30-A
         agf  Agromyces protaetiae
  6/307
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       Cryobacterium (2)
         cart  Cryobacterium arcticum
         cry  Cryobacterium sp. LW097
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       Cnuibacter (1)
         cphy  Cnuibacter physcomitrellae
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       Aurantimicrobium (3)
         amin  Aurantimicrobium minutum
         aum  Aurantimicrobium sp. MWH-Mo1
         auw  Aurantimicrobium sp. MWH-Uga1
  5/307
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       Pontimonas (1)
       Microcella (1)
         malk  Microcella alkaliphila
 11/307
       Mycetocola (1)
         myl  Mycetocola sp. 449
  6/307
       Salinibacterium (3)
         salc  Salinibacterium sp. CGMCC 1.16371
         sala  Salinibacterium sp. UTAS2018
         sald  Salinibacterium sp. dk2585
  6/307
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       Humibacter (2)
         hum  Humibacter sp. BT305
         huw  Humibacter sp. WJ7-1
  6/307
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       Gryllotalpicola (1)
         gry  Gryllotalpicola sp. 2DFW10M-5
  6/307
       Protaetiibacter (1)
         lyd  Protaetiibacter intestinalis
  6/307
       Lysinimonas (1)
         lyk  Lysinimonas sp. KACC 19322
  6/307
       Plantibacter (1)
         plap  Plantibacter sp. PA-3-X8
  6/307
       Leucobacter (3)
         leu  Leucobacter sp. DSM 101948
         ltr  Leucobacter triazinivorans
         leb  Leucobacter sp. HDW9A
  6/307
  5/307
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       Agrococcus (1)
         agg  Agrococcus sp. SGAir0287
  5/307
       Marisediminicola (1)
       Herbiconiux (1)
         hea  Herbiconiux sp. SALV-R1
 12/307
       Arthrobacter (18)
         art  Arthrobacter sp. FB24
         arr  Arthrobacter sp. Rue61a
         arm  Arthrobacter sp. PAMC 25486
         arl  Arthrobacter sp. LS16
         are  Arthrobacter sp. ERGS1:01
         aaq  Arthrobacter alpinus R3.8
         arw  Arthrobacter alpinus A3
         arh  Arthrobacter sp. Hiyo8
         ary  Arthrobacter sp. YC-RL1
         arz  Arthrobacter sp. ATCC 21022
         aru  Arthrobacter sp. U41
         arq  Arthrobacter sp. QXT-31
         arn  Arthrobacter sp. YN
         arx  Arthrobacter sp. ZXY-2
         acry  Arthrobacter crystallopoietes
         arth  Arthrobacter sp. PGP41
         artp  Arthrobacter sp. PAMC25564
         acit  Arthrobacter citreus
 13/307
 13/307
  5/307
  6/307
  6/307
  6/307
  6/307
  3/307
  6/307
  6/307
 13/307
 12/307
 13/307
  6/307
 12/307
 12/307
 13/307
  5/307
       Psychromicrobium (1)
         ari  Psychromicrobium lacuslunae
  5/307
       Paenarthrobacter (1)
         aau  Paenarthrobacter aurescens
 13/307
       Pseudarthrobacter (5)
         ach  Pseudarthrobacter chlorophenolicus
         apn  Pseudarthrobacter phenanthrenivorans
         psul  Pseudarthrobacter sulfonivorans
         psni  Pseudarthrobacter sp. NIBRBAC000502771
         psey  Pseudarthrobacter sp. YJ56
 13/307
 12/307
 12/307
 12/307
 12/307
       Glutamicibacter (4)
         aai  Glutamicibacter arilaitensis
         gar  Glutamicibacter halophytocola
         gcr  Glutamicibacter creatinolyticus
         glu  Glutamicibacter sp. ZJUTW
  6/307
  6/307
  6/307
  6/307
       Renibacterium (1)
         rsa  Renibacterium salmoninarum
 13/307
       Kocuria (6)
         krh  Kocuria rhizophila
         kpl  Kocuria palustris
         kfv  Kocuria flava
         kii  Kocuria indica
         krs  Kocuria rosea
         kod  Kocuria sp. KD4
 11/307
  5/307
 11/307
 11/307
 11/307
 12/307
       Micrococcus (2)
         mlu  Micrococcus luteus
         mick  Micrococcus sp. KBS0714
 11/307
 11/307
       Rothia (3)
       Sinomonas (1)
         satk  Sinomonas atrocyanea
  6/307
       Neomicrococcus (1)
         nae  Neomicrococcus aestuarii
 11/307
       Auritidibacter (1)
         aul  Auritidibacter sp. NML130574
  5/307
       Citricoccus (1)
         cig  Citricoccus sp. SGAir0453
 11/307
       Beutenbergia (1)
         bcv  Beutenbergia cavernae
  6/307
       Brachybacterium (7)
         bfa  Brachybacterium faecium
         brx  Brachybacterium sp. P6-10-X1
         brv  Brachybacterium sp. VR2415
         bgg  Brachybacterium ginsengisoli
         brz  Brachybacterium sp. VM2412
         bsau  Brachybacterium saurashtrense
         brr  Brachybacterium sp. SGAir0954
  6/307
  6/307
  6/307
  6/307
  6/307
  6/307
  7/307
       Dermabacter (2)
         dva  Dermabacter vaginalis
         djj  Dermabacter jinjuensis
  2/307
  2/307
       Jonesia (1)
         jde  Jonesia denitrificans
  6/307
       Kytococcus (1)
         kse  Kytococcus sedentarius
 12/307
       Dermacoccus (2)
         dni  Dermacoccus nishinomiyaensis
         day  Dermacoccus abyssi
 12/307
 12/307
       Luteipulveratus (1)
         lmoi  Luteipulveratus mongoliensis
 12/307
       Xylanimonas (2)
         xce  Xylanimonas cellulosilytica
         xyl  Xylanimonas allomyrinae
  6/307
  6/307
       Isoptericola (2)
         iva  Isoptericola variabilis
         ido  Isoptericola dokdonensis
  6/307
  6/307
       Cellulosimicrobium (2)
         cet  Cellulosimicrobium sp. TH-20
         cceu  Cellulosimicrobium cellulans
  6/307
  6/307
       Xylanimicrobium (1)
         xya  Xylanimicrobium sp. FW10M-9
  6/307
       Sanguibacter (2)
         ske  Sanguibacter keddieii
         sanw  Sanguibacter sp. HDW7
  6/307
  6/307
       Cellulomonas (7)
         cfl  Cellulomonas flavigena
         cfi  Cellulomonas fimi
         cga  Cellulomonas gilvus
         cez  Cellulomonas sp. PSBB021
         celz  Cellulomonas shaoxiangyii
         cej  Cellulomonas sp. JZ18
         celh  Cellulomonas sp. H30R-01
 12/307
  6/307
  6/307
  6/307
  6/307
  6/307
 12/307
       Oerskovia (1)
         oek  Oerskovia sp. KBS0722
  6/307
       Pseudactinotalea (1)
         psei  Pseudactinotalea sp. HY158
  5/307
       Intrasporangium (1)
         ica  Intrasporangium calvum
  8/307
       Arsenicicoccus (1)
         ars  Arsenicicoccus sp. oral taxon 190
  8/307
       Serinicoccus (2)
         serj  Serinicoccus sp. JLT9
         serw  Serinicoccus sp. W204
  6/307
  6/307
       Janibacter (3)
         jte  Janibacter indicus
         jli  Janibacter limosus
         jme  Janibacter melonis
 12/307
 12/307
 12/307
       Ornithinimicrobium (2)
         orn  Ornithinimicrobium sp. AMA3305
         orz  Ornithinimicrobium sp. H23M54
  6/307
  6/307
       Tetrasphaera (1)
         teh  Tetrasphaera sp. HKS02
 14/307
       Phycicoccus (1)
         phw  Phycicoccus sp. HDW14
 11/307
       Brevibacterium (4)
         bly  Brevibacterium linens BS258
         blin  Brevibacterium aurantiacum
         bri  Brevibacterium sp. CS2
         blut  Brevibacterium luteolum
  6/307
  6/307
  6/307
  6/307
       Dermatophilus (1)
         dco  Dermatophilus congolensis
  2/307
       Georgenia (1)
         gez  Georgenia sp. Z294
  6/307
       Cutibacterium (14)
       Propionibacterium (5)
       Pseudopropionibacterium (1)
       Acidipropionibacterium (4)
       Microlunatus (3)
         mph  Microlunatus phosphovorus
         mik  Microlunatus sp. KUDC0627
         micg  Microlunatus sp. Gsoil 973
  7/307
  6/307
  2/307
       Tessaracoccus (4)
         tfl  Tessaracoccus flavus
         tfa  Tessaracoccus flavescens
         tes  Tessaracoccus aquimaris
         tez  Tessaracoccus sp. T2.5-30
 12/307
  5/307
  5/307
 12/307
       Raineyella (1)
         rain  Raineyella sp. CBA3103
  6/307
       Propioniciclava (1)
         prv  Propioniciclava sp. HDW11
  4/307
       Nocardioides (8)
         nca  Nocardioides sp. JS614
         ndk  Nocardioides dokdonensis
         noy  Nocardioides euryhalodurans
         noi  Nocardioides sp. dk3136
         noo  Nocardioides sp. S-1144
         ndp  Nocardioides daphniae
 12/307
 11/307
 11/307
 11/307
 11/307
  5/307
       Kribbella (1)
         kfl  Kribbella flavida
 24/307
       Pimelobacter (1)
         psim  Pimelobacter simplex
 14/307
       Aeromicrobium (4)
         aer  Aeromicrobium erythreum
         aez  Aeromicrobium sp. 592
         aeb  Aeromicrobium sp. A1-2
         aef  Aeromicrobium sp. MF47
 11/307
 11/307
 15/307
 11/307
       Micropruina (1)
         mgg  Micropruina glycogenica
  5/307
       Thermobifida (1)
         tfu  Thermobifida fusca
 13/307
       Nocardiopsis (3)
         nda  Nocardiopsis dassonvillei
         nal  Nocardiopsis alba
         ngv  Nocardiopsis gilva
 12/307
 13/307
 13/307
       Streptomonospora (1)
         strr  Streptomonospora sp. M2
 13/307
       Thermomonospora (1)
         tcu  Thermomonospora curvata
  9/307
       Actinomadura (1)
         actw  Actinomadura sp. WMMB499
 13/307
       Streptosporangium (1)
         sro  Streptosporangium roseum
 10/307
       Nonomuraea (2)
         noa  Nonomuraea sp. ATCC 55076
         now  Nonomuraea sp. WYY166
 10/307
 10/307
       Frankia (5)
         fra  Frankia casuarinae
         fre  Frankia sp. EAN1pec
         fri  Frankia inefficax
         fal  Frankia alni
         fsy  Candidatus Frankia datiscae
 13/307
  9/307
  9/307
  9/307
  9/307
       Acidothermus (1)
       Nakamurella (2)
         nml  Nakamurella multipartita
         nak  Nakamurella sp. s14-144
  8/307
 11/307
       Geodermatophilus (1)
         gob  Geodermatophilus obscurus
 14/307
       Blastococcus (1)
         bsd  Blastococcus saxobsidens
 14/307
       Modestobacter (1)
         mmar  Modestobacter marinus
 12/307
       Kineococcus (1)
         kra  Kineococcus radiotolerans
  6/307
       Saccharopolyspora (3)
         sen  Saccharopolyspora erythraea
         sace  Saccharopolyspora sp. E2A
         sacg  Saccharopolyspora sp. ASAGF58
 13/307
 13/307
 13/307
       Saccharomonospora (2)
         svi  Saccharomonospora viridis
         sacc  Saccharomonospora sp. 31sw
 14/307
 15/307
       Amycolatopsis (11)
         amd  Amycolatopsis mediterranei U32
         amn  Amycolatopsis mediterranei S699
         amm  Amycolatopsis mediterranei S699
         amz  Amycolatopsis mediterranei RB
         aoi  Amycolatopsis keratiniphila
         aja  Amycolatopsis japonica
         amq  Amycolatopsis methanolica
         amyc  Amycolatopsis sp. AA4
         amyb  Amycolatopsis sp. BJA-103
         aab  Amycolatopsis albispora
         amyy  Amycolatopsis sp. YIM 10
 13/307
 13/307
 13/307
 13/307
 13/307
 13/307
 13/307
 14/307
 13/307
 13/307
 14/307
       Pseudonocardia (8)
         pdx  Pseudonocardia dioxanivorans
         psea  Pseudonocardia sp. AL041005-10
         psee  Pseudonocardia sp. EC080625-04
         pseh  Pseudonocardia sp. HH130629-09
         pseq  Pseudonocardia sp. EC080610-09
         pecq  Pseudonocardia sp EC080619-01
         phh  Pseudonocardia sp. HH130630-07
         paut  Pseudonocardia autotrophica
 14/307
 13/307
  9/307
 14/307
  9/307
  9/307
 14/307
 14/307
       Actinosynnema (2)
         apre  Actinosynnema pretiosum
         ami  Actinosynnema mirum
 10/307
 10/307
       Saccharothrix (2)
         sesp  Saccharothrix espanaensis
         ssyi  Saccharothrix syringae
 13/307
 13/307
       Kutzneria (1)
         kal  Kutzneria albida
 10/307
       Kibdelosporangium (1)
         kphy  Kibdelosporangium phytohabitans
 13/307
       Lentzea (1)
         led  Lentzea guizhouensis
 18/307
       Actinoalloteichus (5)
         ahm  Actinoalloteichus hymeniacidonis
         acti  Actinoalloteichus sp. GBA129-24
         acad  Actinoalloteichus fjordicus
         ahg  Actinoalloteichus hoggarensis
         acta  Actinoalloteichus sp. AHMU CJ021
  9/307
 10/307
 10/307
 10/307
 13/307
       Alloactinosynnema (1)
         alo  Alloactinosynnema sp. L-07
 14/307
       Prauserella (1)
         pmad  Prauserella marina
 14/307
       Salinispora (2)
         stp  Salinispora tropica
         saq  Salinispora arenicola
  7/307
  7/307
       Micromonospora (6)
         mau  Micromonospora aurantiaca
         mil  Micromonospora sp. L5
         micb  Micromonospora sp. B006
         mtua  Micromonospora tulbaghiae
         mich  Micromonospora sp. HM134
         mtem  Micromonospora terminaliae
 11/307
 11/307
 11/307
 11/307
  9/307
 13/307
       Verrucosispora (1)
         vma  Verrucosispora maris
 13/307
       Actinoplanes (5)
         ase  Actinoplanes sp. SE50/110
         ams  Actinoplanes missouriensis
         actn  Actinoplanes sp. N902-109
         afs  Actinoplanes friuliensis
         acts  Actinoplanes sp. SE50
 11/307
 12/307
 12/307
 12/307
 11/307
       Plantactinospora (3)
         plk  Plantactinospora sp. KBS50
         plab  Plantactinospora sp. BC1
         plat  Plantactinospora sp. BB1
  9/307
 14/307
 14/307
       Phytohabitans (2)
         pfla  Phytohabitans flavus
         psuu  Phytohabitans suffuscus
  9/307
  9/307
       Catenulispora (1)
         cai  Catenulispora acidiphila
 13/307
       Stackebrandtia (1)
         sna  Stackebrandtia nassauensis
 10/307
       Arcanobacterium (2)
         arca  Arcanobacterium sp. 2701
  2/307
       Mobiluncus (1)
       Trueperella (3)
         tpy  Trueperella pyogenes TP6375
         tpyo  Trueperella pyogenes TP8
  2/307
  2/307
       Actinotignum (2)
         actt  Actinobaculum sp. 313
  2/307
       Schaalia (2)
       Actinomyces (11)
         aos  Actinomyces oris
         ard  Actinomyces radicidentis
         ane  Actinomyces naeslundii
         ahw  Actinomyces howellii
  2/307
  2/307
  2/307
  2/307
       Flaviflexus (2)
         fsl  Flaviflexus salsibiostraticola
         flh  Flaviflexus sp. H23T48
  6/307
  6/307
       Bifidobacterium (56)
         bbi  Bifidobacterium bifidum S17
         bbf  Bifidobacterium bifidum BGN4
         bast  Bifidobacterium asteroides
         bcor  Bifidobacterium coryneforme
         bii  Bifidobacterium indicum
  2/307
  2/307
  2/307
  2/307
  2/307
       Gardnerella (3)
       Scardovia (1)
       Parascardovia (1)
       Thermobispora (1)
         tbi  Thermobispora bispora
  9/307
       Actinopolyspora (1)
         aey  Actinopolyspora erythraea
 13/307
       Planktophila (6)
         plan  Candidatus Planktophila lacus
         plak  Candidatus Planktophila dulcis
         plim  Candidatus Planktophila limnetica
         psuf  Candidatus Planktophila sulfonica
         pvs  Candidatus Planktophila versatilis
         pvn  Candidatus Planktophila vernalis
  6/307
  6/307
  6/307
  6/307
  6/307
  6/307
       Nanopelagicus (3)
       Epidermidibacterium (1)
         eke  Epidermidibacterium keratini
 13/307
       Unclassified Actinobacteria (1)
         abai  Actinobacteria bacterium
  9/307
       Rubrobacter (3)
         rub  Rubrobacter sp. SCSIO 52909
  9/307
       Baekduia (1)
         bsol  Baekduia soli
  8/307
       Conexibacter (1)
         cwo  Conexibacter woesei
  9/307
       Acidimicrobium (1)
       Ilumatobacter (1)
         aym  Ilumatobacter coccineus
 11/307
       Cryptobacterium (1)
       Slackia (1)
       Eggerthella (2)
       Gordonibacter (1)
       Adlercreutzia (1)
       Denitrobacterium (1)
       Atopobium (1)
       Olsenella (2)
       Parolsenella (1)
       Coriobacterium (1)
       Collinsella (1)
       Unclassified Coriobacteriaceae (1)
       Egibacter (1)
       Euzebya (1)
         euz  Euzebya sp. DY32-46
 11/307
     Cyanobacteria (128)
       Synechocystis (8)
       Synechococcus (23)
         syp  Synechococcus sp. PCC7002
         syv  Synechococcus sp. PCC 73109
         syl  Synechococcus sp. PCC 7003
  8/307
  8/307
  8/307
       Thermosynechococcus (4)
       Cyanobium (2)
         cgc  Cyanobium gracile
         cyi  Cyanobium sp. NIES-981
  8/307
  8/307
       Dactylococcopsis (1)
       Chamaesiphon (1)
       Leptolyngbya (4)
       Halomicronema (1)
       Pseudanabaena (2)
       Prochlorococcus (14)
       Acaryochloris (1)
         amr  Acaryochloris marina
  8/307
       Thermoleptolyngbya (1)
       Gloeocapsa (1)
         glp  Gloeocapsa sp. PCC 7428
  8/307
       Geminocystis (2)
       Chondrocystis (1)
       Microcystis (4)
       Cyanobacterium (3)
       Halothece (1)
       Euhalothece (1)
         enn  Euhalothece natronophila
  8/307
       Atelocyanobacterium (1)
       Crocosphaera (2)
         cyt  Crocosphaera subtropica
  8/307
       Rippkaea (2)
       Gloeothece (2)
       Cyanothece (1)
         cyn  Cyanothece sp. PCC 7425
  8/307
       Trichodesmium (1)
       Microcoleus (1)
       Arthrospira (1)
       Planktothrix (1)
       Oxynema (1)
       Limnospira (1)
       Geitlerinema (1)
       Oscillatoria (2)
       Moorea (1)
         mpro  Moorea producens
  8/307
       Crinalium (1)
       Gloeobacter (2)
         glj  Gloeobacter kilaueensis
 11/307
       Nostoc (8)
         nop  Nostoc sp. PCC 7524
         nfl  Nostoc flagelliforme
         noe  Nostoc sp. CENA543
  6/307
  8/307
  8/307
       Trichormus (2)
       Anabaena (4)
         anb  Anabaena sp. 90
  8/307
       Cylindrospermum (1)
       Calothrix (3)
         calt  Calothrix sp. PCC 6303
         calh  Calothrix sp. 336/3
  8/307
  8/307
       Rivularia (1)
         riv  Rivularia sp. PCC 7116
  8/307
       Fischerella (1)
       Nodularia (1)
       Dolichospermum (2)
       Tolypothrix (1)
         toq  Tolypothrix sp. PCC 7910
  8/307
       Unclassified Nostocales (1)
       Chroococcidiopsis (1)
       Pleurocapsa (1)
         plp  Pleurocapsa sp. PCC 7327
  8/307
       Stanieria (2)
       Unclassified Cyanobacteria (2)
       Unclassified Melainabacteria (1)
     Chloroflexi (31)
       Dehalococcoides (12)
       Dehalogenimonas (3)
       Roseiflexus (2)
       Chloroflexus (3)
         cau  Chloroflexus aurantiacus
         chl  Chloroflexus aurantiacus Y-400-fl
         cag  Chloroflexus aggregans
  8/307
  8/307
  8/307
       Herpetosiphon (1)
         hau  Herpetosiphon aurantiacus
  7/307
       Thermomicrobium (1)
       Sphaerobacterineae (1)
       Anaerolinea (1)
       Brevefilum (1)
       Pelolinea (1)
       Unclassified Anaerolineaceae (1)
       Caldilinea (1)
       Promineofilum (1)
       Unclassified Ktedonobacterales (1)
         kbs  Ktedonobacterales bacterium SCAWS-G2
  9/307
       Tepidiforma (1)
     Deinococcus-Thermus (33)
       Deinococcus (16)
         dge  Deinococcus geothermalis
         ddr  Deinococcus deserti
         dmr  Deinococcus maricopensis
         dgo  Deinococcus gobiensis
         dpd  Deinococcus peraridilitoris
         dsw  Deinococcus swuensis
         dch  Deinococcus soli
         dab  Deinococcus actinosclerus
         dpu  Deinococcus puniceus
         dez  Deinococcus irradiatisoli
         dein  Deinococcus sp. AJ005
  6/307
  6/307
  6/307
  6/307
  7/307
  6/307
  6/307
  6/307
  6/307
  6/307
  6/307
       Truepera (1)
         tra  Truepera radiovictrix
  6/307
       Thermus (10)
       Meiothermus (4)
       Oceanithermus (1)
       Marinithermus (1)
     Other Terrabacteria group (3)
       Chthonomonas (1)
       Fimbriimonas (1)
         fgi  Fimbriimonas ginsengisoli
  9/307
       Thermobaculum (1)
     Chlamydiae (120)
       Chlamydia (114)
       Protochlamydia (2)
         pcu  Candidatus Protochlamydia amoebophila
         pnl  Candidatus Protochlamydia naegleriophila
  8/307
  8/307
       Parachlamydia (1)
         puv  Parachlamydia acanthamoebae
 19/307
       Neochlamydia (1)
         ney  Neochlamydia sp. S13
  8/307
       Waddlia (1)
         wch  Waddlia chondrophila
  8/307
       Simkania (1)
         sng  Simkania negevensis
  8/307
     Verrucomicrobia (14)
       Opitutus (1)
         ote  Opitutus terrae
  9/307
       Lacunisphaera (1)
         obg  Lacunisphaera limnophila
 10/307
       Nibricoccus (1)
         vbh  Nibricoccus aquaticus HZ-65
  9/307
       Unclassified Opitutaceae (1)
       Coraliomargarita (1)
         caa  Coraliomargarita akajimensis
  9/307
       Akkermansia (2)
         amu  Akkermansia muciniphila
  2/307
       Roseimicrobium (1)
         roo  Roseimicrobium sp. ORNL1
  9/307
       Luteolibacter (1)
         luo  Luteolibacter sp. G-1-1-1
  9/307
       Xiphinematobacter (1)
       Methylacidiphilum (2)
       Unclassified Verrucomicrobia (2)
     Planctomycetes (31)
       Rhodopirellula (1)
         rba  Rhodopirellula baltica
  9/307
       Pirellula (2)
         psl  Pirellula staleyi
  8/307
       Roseimaritima (1)
       Mariniblastus (1)
         mff  Mariniblastus fucicola
  8/307
       Thermogutta (1)
       Lacipirellula (1)
       Planctopirus (2)
       Rubinisphaera (1)
       Planctomyces (2)
         plh  Planctomyces sp. SH-PL62
  8/307
       Fuerstia (1)
       Gimesia (2)
         gmr  Gimesia maris
         gim  Gimesia sp. E7
  2/307
  2/307
       Bremerella (1)
       Gemmata (3)
         ges  Gemmata sp. SH-PL17
         gog  Gemmata obscuriglobus
  9/307
  9/307
       Tuwongella (1)
         tim  Tuwongella immobilis
  8/307
       Limnoglobus (1)
         lrs  Limnoglobus roseus
  9/307
       Isosphaera (1)
         ipa  Isosphaera pallida
  8/307
       Singulisphaera (1)
         saci  Singulisphaera acidiphila
  7/307
       Paludisphaera (1)
         pbor  Paludisphaera borealis
  8/307
       Aquisphaera (1)
       Kuenenia (1)
       Phycisphaera (1)
       Sedimentisphaera (2)
       Limihaloglobus (1)
       Anaerohalosphaera (1)
     Kiritimatiellaeota (1)
       Kiritimatiella (1)
 
     Lentisphaerae (1)
       Unclassified Victivallales (1)
         vbc  Victivallales bacterium CCUG 44730
  2/307
     Spirochaetes (86)
       Borreliella (19)
       Borrelia (11)
       Treponema (23)
       Sediminispirochaeta (1)
       Spirochaeta (4)
         sper  Spirochaeta perfilievii
 11/307
       Sphaerochaeta (3)
       Salinispira (1)
         slr  Salinispira pacifica
  2/307
       Oceanispirochaeta (1)
       Leptospira (13)
         lil  Leptospira interrogans serovar Lai 56601
         lie  Leptospira interrogans serovar Lai IPAV
         lic  Leptospira interrogans serovar Copenhageni
         lis  Leptospira interrogans serovar Linhai
         lbj  Leptospira borgpetersenii JB197
         lbl  Leptospira borgpetersenii L550
         lbi  Leptospira biflexa serovar Patoc Patoc 1 (Paris)
         lbf  Leptospira biflexa serovar Patoc Patoc 1 (Ames)
         lst  Leptospira santarosai
         laj  Leptospira tipperaryensis
         lmay  Leptospira mayottensis
         lkm  Leptospira kmetyi
         lwl  Leptospira weilii
  9/307
 10/307
  9/307
 10/307
 10/307
 10/307
 10/307
 10/307
 10/307
 10/307
 10/307
 10/307
 10/307
       Turneriella (1)
         tpx  Turneriella parva
  9/307
       Brachyspira (9)
     Acidobacteria (13)
       Koribacter (1)
       Acidobacterium (1)
       Granulicella (3)
       Terriglobus (3)
       Acidisarcina (1)
       Edaphobacter (1)
       Solibacter (1)
         sus  Candidatus Solibacter usitatus
  9/307
       Chloracidobacterium (1)
         ctm  Chloracidobacterium thermophilum
  2/307
       Luteitalea (1)
         abac  Luteitalea pratensis
  7/307
     Elusimicrobia (4)
       Elusimicrobium (1)
       Endomicrobium (2)
       Termite group 1 (1)
 
 
 
     Fusobacteria (24)
       Fusobacterium (13)
       Ilyobacter (1)
         ipo  Ilyobacter polytropus
  2/307
       Leptotrichia (7)
       Sebaldella (1)
       Streptobacillus (1)
       Sneathia (1)
     Synergistetes (6)
       Thermanaerovibrio (1)
       Aminobacterium (1)
       Thermovirga (1)
       Anaerobaculum (1)
       Fretibacterium (1)
       Cloacibacillus (1)
 
 
 
 
 
 
     Fibrobacteres (2)
       Fibrobacter (2)
 
     Gemmatimonadetes (3)
       Gemmatimonas (2)
         gau  Gemmatimonas aurantiaca
         gph  Gemmatimonas phototrophica
 10/307
 10/307
       Gemmatirosa (1)
         gba  Gemmatirosa kalamazoonesis
  9/307
     Bacteroidetes (359)
       Bacteroides (20)
       Porphyromonas (6)
       Fermentimonas (1)
       Petrimonas (2)
       Paludibacter (1)
       Parabacteroides (2)
       Tannerella (2)
       Muribaculum (1)
       Duncaniella (1)
       Barnesiella (1)
       Proteiniphilum (1)
       Dysgonomonas (1)
         dys  Dysgonomonas sp. HDW5A
  6/307
       Odoribacter (1)
       Butyricimonas (1)
       Azobacteroides (1)
       Prevotella (10)
       Alloprevotella (1)
       Alistipes (6)
       Mucinivorans (1)
       Unclassified Bacteroidales (1)
       Draconibacterium (2)
       Salinivirga (1)
       Alkalitalea (1)
       Labilibaculum (1)
       Salinibacter (2)
         sru  Salinibacter ruber DSM 13855
         srm  Salinibacter ruber M8
  5/307
  4/307
       Rhodothermus (2)
         rmr  Rhodothermus marinus DSM 4252
         rmg  Rhodothermus marinus SG0.5JP17-172
  2/307
  2/307
       Unclassified Rhodothermaceae (1)
       Chitinophaga (4)
         cpi  Chitinophaga pinensis
         cbae  Chitinophaga caeni
         chit  Chitinophaga sp. XS-30
         chih  Chitinophaga sp. H33E-04
  8/307
  9/307
  9/307
  8/307
       Niastella (1)
         nko  Niastella koreensis
  9/307
       Niabella (2)
         nso  Niabella soli
  9/307
       Flavisolibacter (2)
         fla  Flavisolibacter tropicus
         fgg  Flavisolibacter ginsenosidimutans
  9/307
  9/307
       Arachidicoccus (4)
       Filimonas (1)
         fln  Filimonas lacunae
 68/307
       Pseudoflavitalea (1)
       Panacibacter (1)
         pgin  Panacibacter ginsenosidivorans
  8/307
       Pseudobacter (1)
         pgo  Pseudobacter ginsenosidimutans
  8/307
       Flavihumibacter (1)
       Haliscomenobacter (1)
         hhy  Haliscomenobacter hydrossis
  7/307
       Saprospira (1)
       Pedobacter (7)
         phe  Pedobacter heparinus
         pep  Pedobacter sp. PACM 27299
         pcm  Pedobacter cryoconitis
         psty  Pedobacter steynii
         pgs  Pedobacter ginsengisoli
         pej  Pedobacter sp. CJ43
         pek  Pedobacter sp. KBS0701
  9/307
  9/307
  9/307
  9/307
  9/307
  8/307
  9/307
       Pseudopedobacter (1)
         psn  Pseudopedobacter saltans
  6/307
       Sphingobacterium (9)
         shg  Sphingobacterium sp. 21
         sht  Sphingobacterium sp. ML3W
         sphn  Sphingobacterium sp. B29
         smiz  Sphingobacterium mizutaii
         spsc  Sphingobacterium psychroaquaticum
         sphz  Sphingobacterium sp. CZ-2
         sphe  Sphingobacterium sp. dk4302
         spdr  Sphingobacterium sp. DR205
  8/307
  6/307
  6/307
  7/307
  6/307
  7/307
  7/307
  6/307
       Solitalea (1)
         scn  Solitalea canadensis
  9/307
       Mucilaginibacter (8)
         mup  Mucilaginibacter sp. PAMC 26640
         muc  Mucilaginibacter xinganensis
         mgot  Mucilaginibacter gotjawali
         muh  Mucilaginibacter sp. HYN0043
         mgin  Mucilaginibacter ginsenosidivorans
         mgk  Mucilaginibacter ginsenosidivorax
         mrub  Mucilaginibacter rubeus
         mgos  Mucilaginibacter gossypii
  9/307
  9/307
  9/307
  9/307
  9/307
  9/307
  9/307
  9/307
       Anseongella (1)
         agd  Anseongella ginsenosidimutans
  9/307
       Olivibacter (1)
         oli  Olivibacter sp. LS-1
  8/307
       Unclassified Sphingobacteriaceae (1)
         sbx  Sphingobacteriaceae bacterium GW460-11-11-14-LB5
  9/307
       Cyclobacterium (2)
         cmr  Cyclobacterium marinum
         camu  Cyclobacterium amurskyense
 13/307
 11/307
       Belliella (1)
         bbd  Belliella baltica
 13/307
       Echinicola (3)
         evi  Echinicola vietnamensis
         est  Echinicola strongylocentroti
         echi  Echinicola sp. LN3S3
  9/307
  9/307
  9/307
       Algoriphagus (1)
         alm  Algoriphagus sanaruensis
  9/307
       Cytophaga (1)
         chu  Cytophaga hutchinsonii
  8/307
       Dyadobacter (1)
         dfe  Dyadobacter fermentans
  9/307
       Spirosoma (6)
         sli  Spirosoma linguale
         srd  Spirosoma radiotolerans
         smon  Spirosoma montaniterrae
         spir  Spirosoma pollinicola
         spik  Spirosoma sp. KCTC 42546
         spib  Spirosoma sp. BT328
  9/307
  9/307
  9/307
  9/307
  9/307
  9/307
       Leadbetterella (1)
         lby  Leadbetterella byssophila
  8/307
       Runella (3)
         rsi  Runella slithyformis
         run  Runella sp. HYN0085
         rup  Runella sp. SP2
 13/307
  9/307
  9/307
       Emticicia (1)
         eol  Emticicia oligotrophica
  9/307
       Fibrella (2)
         fae  Fibrella aestuarina
         fib  Fibrella sp. ES10-3-2-2
  9/307
  9/307
       Allopseudarcicella (1)
         psez  Allopseudarcicella aquatilis
  9/307
       Arcticibacterium (1)
         als  Arcticibacterium luteifluviistationis
 14/307
       Rhodocytophaga (1)
         rhoz  Rhodocytophaga sp. 172606-1
  9/307
       Flexibacter (1)
         fli  Bernardetia litoralis
  6/307
       Hymenobacter (10)
         hsw  Hymenobacter swuensis
         hym  Hymenobacter sp. APR13
         hyd  Hymenobacter sp. DG25B
         hye  Hymenobacter sp. DG25A
         hyg  Hymenobacter sedentarius
         hyp  Hymenobacter sp. PAMC 26554
         hyz  Hymenobacter sp. PAMC 26628
         hnv  Hymenobacter nivis
         hyh  Hymenobacter oligotrophus
         hyj  Hymenobacter jejuensis
  9/307
  9/307
  9/307
  9/307
  9/307
  9/307
  9/307
  9/307
  9/307
  9/307
       Pontibacter (2)
         pko  Pontibacter korlensis
         pact  Pontibacter actiniarum
  9/307
  9/307
       Rufibacter (3)
         ruf  Rufibacter sp. DG31D
         rti  Rufibacter tibetensis
         rud  Rufibacter sp. DG15C
  9/307
  9/307
  9/307
       Nibribacter (1)
         nib  Nibribacter sp. BT10
  9/307
       Marivirga (1)
         mtt  Marivirga tractuosa
 13/307
       Flammeovirga (2)
         flm  Flammeovirga sp. MY04
         fll  Flammeovirga pectinis
 10/307
 10/307
       Fabibacter (1)
         fpf  Fabibacter pacificus
  9/307
       Unclassified Flammeovirgaceae (1)
         fbt  Flammeovirgaceae bacterium 311
  9/307
       Amoebophilus (1)
       Cardinium (3)
       Chryseolinea (1)
         chk  Chryseolinea soli
  9/307
       Gramella (4)
         gfo  Gramella forsetii
         grl  Gramella salexigens
         gfl  Gramella flava
         grs  Gramella fulva
  7/307
  7/307
  7/307
  7/307
       Flavobacterium (25)
         fps  Flavobacterium psychrophilum JIP02/86
         fpc  Flavobacterium psychrophilum CSF259-93
         fpy  Flavobacterium psychrophilum FPG101
         fpo  Flavobacterium psychrophilum FPG3
         fpq  Flavobacterium psychrophilum 950106-1/1
         fpv  Flavobacterium psychrophilum V3-5
         fpw  Flavobacterium psychrophilum V4-24
         fpk  Flavobacterium psychrophilum v4-33
         fpsz  Flavobacterium psychrophilum Z2
         fjo  Flavobacterium johnsoniae UW101
         fjg  Flavobacterium anhuiense
         fbr  Flavobacterium branchiophilum
         fco  Flavobacterium columnare
         fin  Flavobacterium indicum
         fgl  Flavobacterium gilvum
         fcm  Flavobacterium commune
         ffa  Flavobacterium faecale
         fat  Flavobacterium arcticum
         fki  Flavobacterium kingsejongi
         fpal  Flavobacterium pallidum
         fmg  Flavobacterium magnum
         falb  Flavobacterium album
         fcr  Flavobacterium crocinum
         fse  Flavobacterium sediminis
  6/307
  6/307
  6/307
  6/307
  6/307
  6/307
  6/307
  6/307
 11/307
 11/307
 11/307
  6/307
  7/307
  6/307
  7/307
  7/307
  6/307
  7/307
  7/307
  6/307
  7/307
 11/307
 10/307
  6/307
       Capnocytophaga (13)
       Robiginitalea (1)
         rbi  Robiginitalea biformata
  5/307
       Zunongwangia (1)
         zpr  Zunongwangia profunda
  7/307
       Croceibacter (1)
         cat  Croceibacter atlanticus
  9/307
       Riemerella (6)
       Maribacter (5)
         fbc  Maribacter sp. HTCC2170
         marm  Maribacter sp. 1_2014MBL_MicDiv
         mart  Maribacter sp. T28
         marb  Maribacter cobaltidurans
         mare  Maribacter sp. MJ134
  6/307
 11/307
 11/307
 11/307
 11/307
       Cellulophaga (5)
         cao  Cellulophaga algicola
         cly  Cellulophaga lytica DSM 7489
         clh  Cellulophaga lytica HI1
         cbal  Cellulophaga baltica NN016038
         cbat  Cellulophaga baltica 18
 13/307
  8/307
  8/307
 13/307
 13/307
       Weeksella (1)
         wvi  Weeksella virosa
  9/307
       Dokdonia (4)
         kdi  Dokdonia sp. 4H-3-7-5
         dok  Dokdonia sp. MED134
         ddo  Dokdonia donghaensis
         dod  Dokdonia sp. Dokd-P16
  9/307
  8/307
  8/307
  8/307
       Lacinutrix (3)
         lan  Lacinutrix sp. 5H-3-7-4
         lvn  Lacinutrix venerupis
         laci  Lacinutrix sp. Bg11-31
  8/307
  8/307
  8/307
       Zobellia (1)
         zga  Zobellia galactanivorans
 11/307
       Muricauda (3)
         mrs  Muricauda ruestringensis
         mut  Muricauda sp. 501str8
 11/307
 11/307
       Aequorivita (2)
         asl  Aequorivita sublithincola
         aev  Aequorivita sp. H23M31
  9/307
  6/307
       Ornithobacterium (2)
       Psychroflexus (1)
         ptq  Psychroflexus torquis
 19/307
       Nonlabens (5)
         ndo  Nonlabens dokdonensis
         nom  Nonlabens sp. MIC269
         nsd  Nonlabens sediminis
         nob  Nonlabens sp. MB-3u-79
         noj  Nonlabens sp. MJ115
 13/307
  6/307
  6/307
  9/307
  6/307
       Polaribacter (5)
         pom  Polaribacter sp. MED152
         pob  Polaribacter vadi
         prn  Polaribacter reichenbachii
         pola  Polaribacter sp. BM10
         poa  Polaribacter sp. ALD11
  7/307
 10/307
  8/307
 10/307
 10/307
       Elizabethkingia (9)
         eao  Elizabethkingia anophelis NUHP1
         emn  Elizabethkingia anophelis FMS-007
         een  Elizabethkingia anophelis JM-87
         elb  Elizabethkingia miricola
         emg  Elizabethkingia meningoseptica
         ego  Elizabethkingia ursingii
         egm  Elizabethkingia bruuniana
         elz  Elizabethkingia sp. 2-6
         elt  Elizabethkingia sp. JS20170427COW
  7/307
  7/307
  7/307
  7/307
  6/307
  6/307
  7/307
  7/307
  6/307
       Myroides (4)
         myr  Myroides sp. A21
         mpw  Myroides profundi
         mod  Myroides odoratimimus
         myz  Myroides sp. ZB35
  6/307
  6/307
  6/307
  6/307
       Chryseobacterium (15)
         chz  Chryseobacterium sp. StRB126
         cgn  Chryseobacterium gallinarum
         cih  Chryseobacterium sp. IHB B 17019
         chh  Chryseobacterium glaciei
         cio  Chryseobacterium indologenes
         chry  Chryseobacterium sp. T16E-39
         cpip  Chryseobacterium piperi
         ctak  Chryseobacterium taklimakanense
         chrs  Chryseobacterium sp. 3008163
         chrz  Chryseobacterium sp. 6424
         carh  Chryseobacterium arthrosphaerae
         csha  Chryseobacterium shandongense
         cnk  Chryseobacterium nakagawai
         cjt  Chryseobacterium joostei
         clac  Chryseobacterium lactis
  7/307
  7/307
  6/307
  7/307
  7/307
  7/307
  7/307
  8/307
  7/307
  8/307
  7/307
  7/307
  7/307
  7/307
  7/307
       Winogradskyella (2)
         win  Winogradskyella sp. PG-2
  7/307
       Siansivirga (1)
         sze  Siansivirga zeaxanthinifaciens
  7/307
       Algibacter (1)
         ahz  Algibacter alginicilyticus
 10/307
       Sediminicola (1)
         syi  Sediminicola sp. YIK13
 10/307
       Tenacibaculum (5)
         tdi  Tenacibaculum dicentrarchi
         ten  Tenacibaculum sp. LPB0136
         tje  Tenacibaculum jejuense
         tmar  Tenacibaculum maritimum
         tmp  Tenacibaculum mesophilum
  9/307
  8/307
  7/307
  9/307
  7/307
       Lutibacter (1)
         lut  Lutibacter profundi
  6/307
       Urechidicola (1)
         lul  Urechidicola croceus
  6/307
       Wenyingzhuangia (1)
       Formosa (3)
         fop  Formosa sediminum
 10/307
       Salegentibacter (1)
         salt  Salegentibacter sp. T436
  7/307
       Seonamhaeicola (1)
         seon  Seonamhaeicola sp. S2-3
  7/307
       Arenibacter (1)
         aalg  Arenibacter algicola
 12/307
       Olleya (2)
         oll  Olleya sp. Bg11-27
         oaq  Olleya aquimaris
  8/307
  8/307
       Flavivirga (1)
         fek  Flavivirga eckloniae
  6/307
       Tamlana (1)
         taj  Tamlana sp. UJ94
  7/307
       Aureitalea (1)
       Spongiibacterium (1)
         spon  Flagellimonas maritima
 10/307
       Kordia (2)
         kos  Kordia sp. SMS9
         kan  Kordia antarctica
  6/307
  6/307
       Mariniflexile (1)
         marf  Mariniflexile sp. TRM1-10
  7/307
       Aquimarina (3)
         aqb  Aquimarina sp. BL5
         aqa  Aquimarina sp. AD1
         aqd  Aquimarina sp. AD10
 12/307
 13/307
 12/307
       Euzebyella (1)
         emar  Euzebyella marina
 11/307
       Cloacibacterium (1)
         cnr  Cloacibacterium normanense
  8/307
       Muriicola (1)
         mur  Muriicola sp. MMS17-SY002
  7/307
       Psychroserpens (1)
         psyn  Psychroserpens sp. NJDZ02
  8/307
       Antarcticibacterium (2)
         afla  Antarcticibacterium flavum
         anp  Antarcticibacterium sp. PAMC 28998
  7/307
  7/307
       Empedobacter (1)
         ebv  Empedobacter brevis
  9/307
       Oceanihabitans (1)
         oci  Oceanihabitans sp. IOP_32
  7/307
       Bergeyella (1)
       Marinirhabdus (1)
       Apibacter (1)
       Mesoflavibacter (1)
       Unclassified Flavobacteriaceae (3)
         fba  Flavobacteriaceae bacterium 3519-10
         fbe  Flavobacteriaceae bacterium 10Alg115
  8/307
  9/307
       Sulcia (9)
       Blattabacterium (9)
       Fluviicola (2)
         flu  Candidatus Fluviicola riflensis
  9/307
       Owenweeksia (1)
         oho  Owenweeksia hongkongensis
  6/307
       Ichthyobacterium (1)
       Walczuchella (1)
       Uzinura (1)
       Unclassified Bacteroidetes (1)
         bbau  Bacteroidetes bacterium
  8/307
     Chlorobi (17)
       Chlorobaculum (3)
       Chlorobium (5)
       Pelodictyon (2)
       Prosthecochloris (4)
       Chloroherpeton (1)
       Ignavibacterium (1)
         ial  Ignavibacterium album
  6/307
       Melioribacter (1)
     Balneolaeota (1)
       Cyclonatronum (1)
 
     Cloacimonetes (1)
       Cloacimonas (1)
 
     Aquificae (14)
       Aquifex (1)
       Hydrogenobaculum (3)
       Hydrogenobacter (2)
       Thermocrinis (2)
       Sulfurihydrogenibium (2)
       Persephonella (1)
       Thermosulfidibacter (1)
       Thermovibrio (1)
       Desulfurobacterium (1)
 
 
 
 
 
 
 
 
 
     Thermotogae (32)
       Thermotoga (13)
       Pseudothermotoga (3)
       Thermosipho (4)
       Fervidobacterium (3)
       Petrotoga (1)
       Marinitoga (2)
       Defluviitoga (1)
       Kosmotoga (2)
       Mesotoga (2)
         minf  Mesotoga infera
 11/307
       Athalassotoga (1)
     Coprothermobacterota (1)
       Coprothermobacter (1)
 
     Caldiserica (1)
       Caldisericum (1)
 
     Chrysiogenetes (1)
       Desulfurispirillum (1)
 
     Deferribacteres (5)
       Deferribacter (1)
       Denitrovibrio (1)
       Calditerrivibrio (1)
       Flexistipes (1)
       Geovibrio (1)
 
 
 
 
 
     Calditrichaeota (1)
       Caldithrix (1)
 
     Dictyoglomi (2)
       Dictyoglomus (2)
 
     Nitrospirae (9)
       Thermodesulfovibrio (1)
       Nitrospira (4)
         nde  Nitrospira defluvii
         nmv  Nitrospira moscoviensis
         nio  Candidatus Nitrospira inopinata
         nja  Nitrospira japonica
  9/307
  9/307
  9/307
  9/307
       Leptospirillum (4)
         lfc  Leptospirillum ferrooxidans
         lfi  Leptospirillum ferriphilum ML-04
         lfp  Leptospirillum ferriphilum YSK
         leg  Leptospirillum sp. Group II
  6/307
  6/307
  6/307
  6/307
     Thermodesulfobacteria (7)
       Thermodesulfatator (1)
       Thermodesulfobacterium (3)
       Caldimicrobium (1)
       Thermosulfuriphilus (1)
       Thermosulfurimonas (1)
 
 
 
 
 
     Saccharibacteria (4)
       Saccharimonas (4)
 
     Peregrinibacteria (1)
       Peribacter (1)
 
     Bipolaricaulota (2)
       Bipolaricaulis (2)
 
     Other (4)
       Vampirococcus (1)
       Methylomirabilis (1)
       Chazhemtobacterium (1)
       Babela (1)
 
 
 
 
     Unclassified Bacteria (11)
 
   Archaea (323)
     Euryarchaeota (223)
       Methanocaldococcus (6)
       Methanotorris (1)
       Methanococcus (11)
       Methanothermococcus (1)
       Methanofervidicoccus (1)
       Methanothermobacter (8)
       Methanosphaera (2)
       Methanobrevibacter (6)
       Methanobacterium (10)
       Methanothermus (1)
       Methanopyrus (1)
       Archaeoglobus (5)
       Ferroglobus (1)
       Geoglobus (2)
       Thermoplasma (2)
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       Ferroplasma (2)
       Cuniculiplasma (1)
       Unclassified Thermoplasmatales (1)
       Methanomethylophilus (1)
       Methanomassiliicoccus (1)
       Methanoplasma (1)
       Unclassified Thermoplasmata (1)
       Aciduliprofundum (2)
       Pyrococcus (8)
       Thermococcus (27)
       Palaeococcus (1)
       Methanosarcina (23)
       Methanococcoides (2)
       Methanohalophilus (2)
       Methanohalobium (1)
       Methanosalsum (1)
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       Methanosaeta (3)
       Methanospirillum (1)
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       Methanocella (3)
       Halobacterium (4)
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       Halodesulfurarchaeum (2)
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       Haloarcula (6)
         halj  Haloarcula sp. JP-L23
 11/307
       Natronomonas (2)
       Halorhabdus (3)
         hut  Halorhabdus utahensis
 11/307
       Halomicrobium (3)
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         hsn  Halapricum salinum
 11/307
       Unclassified Haloarculaceae (1)
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       Haloterrigena (3)
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       Halovivax (1)
         hru  Halovivax ruber
 11/307
       Natronococcus (1)
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       Halobiforma (1)
       Natronolimnobius (3)
       Natronorubrum (2)
       Natrialbaceae (1)
         nax  Natrialbaceae archaeon XQ-INN 246
  3/307
       Unclassified Nanohaloarchaea (1)
     Crenarchaeota (71)
       Aeropyrum (2)
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       Thermofilum (4)
       Acidilobus (2)
       Caldisphaera (1)
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     Thaumarchaeota (18)
       Nitrosopumilus (6)
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     Korarchaeota (1)
       Korarchaeum (1)
 
     Bathyarchaeota (2)
       Unclassified Bathyarchaeota (2)
 
     Geothermarchaeota (1)
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     Nanoarchaeota (2)
       Nanoarchaeum (1)
       Nanopusillus (1)
 
 
     Micrarchaeota (1)
       Candidatus Mancarchaeum (1)
 
     Lokiarchaeota (2)
       Lokiarchaeum (1)
       Prometheoarchaeum (1)
 
 
     Unclassified Archaea (2)

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Last updated: July 6, 2020

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