KEGG Orthology (KO) - Idiomarina piscisalsi

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:ipi03000]
     03021 Transcription machinery [BR:ipi03021]
     03019 Messenger RNA biogenesis [BR:ipi03019]
     03041 Spliceosome
     03011 Ribosome [BR:ipi03011]
     03009 Ribosome biogenesis [BR:ipi03009]
       CEW91_07380 ribonuclease III
       CEW91_01575 oligoribonuclease
       CEW91_07375 GTPase Era
       CEW91_10215 obgE; GTPase ObgE
       CEW91_01965 dksA; RNA polymerase-binding protein DksA
       CEW91_01875 dksA; RNA polymerase-binding protein DksA
       CEW91_08210 nusA; transcription termination/antitermination protein NusA
       CEW91_02450 nusB; N utilization substance protein B
       CEW91_10955 transcription termination/antitermination protein NusG
       CEW91_02055 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase
       CEW91_12200 16S rRNA (cytosine(967)-C(5))-methyltransferase
       CEW91_10135 16S rRNA methyltransferase
       CEW91_11445 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
       CEW91_02135 16S rRNA (uracil(1498)-N(3))-methyltransferase
       CEW91_00065 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
       CEW91_10525 16S rRNA (cytosine(1402)-N(4))-methyltransferase
       CEW91_10545 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
       CEW91_00680 16S rRNA methyltransferase
       CEW91_00540 rRNA (guanine-N1)-methyltransferase
       CEW91_03365 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
       CEW91_08255 23S rRNA (uridine(2552)-2'-O)-methyltransferase
       CEW91_08125 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
       CEW91_07655 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM
       CEW91_02855 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN
       CEW91_07355 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
       CEW91_02095 RNA pseudouridine synthase
       CEW91_04330 ribosomal large subunit pseudouridine synthase B
       CEW91_05980 23S rRNA pseudouridine(955/2504/2580) synthase
       CEW91_09390 23S rRNA pseudouridine(1911/1915/1917) synthase
       CEW91_06175 pseudouridine synthase
       CEW91_03680 rimI; ribosomal-protein-alanine N-acetyltransferase
       CEW91_10115 30S ribosomal protein S6--L-glutamate ligase
       CEW91_04430 rimM; ribosome maturation factor RimM
       CEW91_02260 OsmC domain/YcaO domain-containing protein
       CEW91_01670 50S ribosomal protein L11 methyltransferase
       CEW91_07820 50S ribosomal protein L3 N(5)-glutamine methyltransferase
       CEW91_06155 cupin
       CEW91_05975 ribonuclease E
       CEW91_10745 ribonuclease E/G
       CEW91_03075 ATP-dependent RNA helicase
       CEW91_02500 ATP-dependent RNA helicase SrmB
       CEW91_01570 ribosome biogenesis GTPase RsgA
       CEW91_02890 der; ribosome biogenesis GTPase Der
       CEW91_11010 GTPase HflX
       CEW91_12170 threonylcarbamoyl-AMP synthase
       CEW91_01170 bifunctional GTP diphosphokinase/guanosine-3'
       CEW91_08200 ribosome-binding factor A
       CEW91_08215 ribosome maturation factor RimP
       CEW91_08120 rsfS; ribosome silencing factor
       CEW91_08080 rRNA maturation RNase YbeY
       CEW91_08260 RNA-binding protein
       CEW91_10725 hypothetical protein
       CEW91_06360 ribosome modulation factor
       CEW91_10695 raiA; ribosomal subunit interface protein
       CEW91_08000 ychF; GTP-binding protein YchF
K03685 rnc; ribonuclease III [EC:3.1.26.3]
K13288 orn; oligoribonuclease [EC:3.1.-.-]
K03595 era; GTPase
K03979 obgE; GTPase [EC:3.6.5.-]
K06204 dksA; DnaK suppressor protein
K06204 dksA; DnaK suppressor protein
K02600 nusA; transcription termination/antitermination protein NusA
K03625 nusB; transcription antitermination protein NusB
K02601 nusG; transcription termination/antitermination protein NusG
K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
K02860 rimM; 16S rRNA processing protein RimM
K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
K08300 rne; ribonuclease E [EC:3.1.26.12]
K08301 rng; ribonuclease G [EC:3.1.26.-]
K05592 deaD; ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
K05590 srmB; ATP-dependent RNA helicase SrmB [EC:3.6.4.13]
K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
K03977 engA; GTPase
K03665 hflX; GTPase
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
K02834 rbfA; ribosome-binding factor A
K09748 rimP; ribosome maturation factor RimP
K09710 ybeB; ribosome-associated protein
K07042 ybeY; probable rRNA maturation factor
K07574 yhbY; RNA-binding protein
K09889 yjgA; ribosome-associated protein
K03812 rmf; ribosome modulation factor
K05808 yhbH; putative sigma-54 modulation protein
K06942 ychF; ribosome-binding ATPase
     03016 Transfer RNA biogenesis [BR:ipi03016]
     03012 Translation factors [BR:ipi03012]
     03110 Chaperones and folding catalysts [BR:ipi03110]
     04131 Membrane trafficking [BR:ipi04131]
     04121 Ubiquitin system
     03051 Proteasome [BR:ipi03051]
     03032 DNA replication proteins [BR:ipi03032]
     03036 Chromosome and associated proteins [BR:ipi03036]
     03400 DNA repair and recombination proteins [BR:ipi03400]
     03029 Mitochondrial biogenesis [BR:ipi03029]
 
   09183 Protein families: signaling and cellular processes
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: January 18, 2020