 Eukaryotic type
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 Basic leucine zipper (bZIP)
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Basic helix-loop-helix (bHLH)
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Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
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Other basic domains
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Zinc finger
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Cys4 thyroid hormone receptor-like
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Cys4 hepatocyte nuclear factor 4-like
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Cys4 estrogen receptor-like
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 K08550 ESR1, NR3A1; estrogen receptor alpha
K08551 ESR2, NR3A2; estrogen receptor beta
K08552 NR3B1, ESRRA; estrogen-related receptor alpha
K08553 NR3B2, ESRRB; estrogen-related receptor beta
K08554 NR3B3, ESRRG; estrogen-related receptor gamma
K08703 NR3BN, ERR; estrogen-related receptor ERR
K05771 NR3C1, GR; glucocorticoid receptor
K08555 NR3C2, MR; mineralocorticoid receptor
K08556 PGR, NR3C3; progesterone receptor
K08557 AR, NR3C4; androgen receptor
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Cys4 nerve growth factor IB-like
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Cys4 Fushi tarazu-F1-like
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Cys4 germ cell nuclear factor
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Cys4 Knirps/DAX1-like
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Cys4 GATA-factors
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Cys2His2 SP/KLF family and related proteins
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Cys2His2 GLI-like
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Cys2His2 Snail
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Cys2His2 BTB-ZF factors
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Cys2His2 BED
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Cys2His2 PRDM
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Cys2His2 metabolic regulators in fungi
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Cys2His2 others
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Cys2HisCys zinc factors
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Cys3His zinc factors
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Cys2CysHis zinc factors
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CXXC CpG-binding proteins
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Cys6 metabolic regulators in fungi
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Other zinc fingers
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Helix-turn-helix
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beta-Scaffold factors with minor groove contacts
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Other transcription factors
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Prokaryotic type
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Transcription Factors