Transcription Factors

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1st Level  2nd Level  3rd Level  4th Level 

 Eukaryotic type
   Basic leucine zipper (bZIP)
   Basic helix-loop-helix (bHLH)
     Ubiquitous (class A) factors
     Myogenic transcription factors
     Achaete-Scute
     Tal/Twist/Atonal/Hen, Lymphoid factors
     Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
     Tal/Twist/Atonal/Hen, HEN
     Tal/Twist/Atonal/Hen, Mesp
     Tal/Twist/Atonal/Hen, Atonal
     Tal/Twist/Atonal/Hen, Pancreatic factors
     Hairy, Hairy/E(SPL)
     Hairy, Fungal regulators
     Factors with PAS domain
       K09093  AHR; aryl hydrocarbon receptor
       K09094  AHRR, AHH; aryl hydrocarbon receptor repressor
       K08268  HIF1A; hypoxia-inducible factor 1 alpha
       K09095  HIF2A, EPAS1; hypoxia-inducible factor 2 alpha
       K09096  HIF3A; hypoxia-inducible factor 3 alpha
       K09097  ARNT; aryl hydrocarbon receptor nuclear translocator
       K15589  ARNT2; aryl hydrocarbon receptor nuclear translocator 2
       K09098  NPAS1_3; neuronal PAS domain-containing protein 1/3
       K09026  NPAS2; neuronal PAS domain-containing protein 2
       K02223  CLOCK, KAT13D; circadian locomoter output cycles kaput protein [EC:2.3.1.48]
       K02296  ARNTL, BMAL1, CYC; aryl hydrocarbon receptor nuclear translocator-like protein 1
       K09099  ARNTL2, BMAL2; aryl hydrocarbon receptor nuclear translocator-like protein 2
       K09100  SIM; single-minded
     INO
     HLH domain only
   Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
   Other basic domains
   Zinc finger
   Helix-turn-helix
   beta-Scaffold factors with minor groove contacts
   Other transcription factors
 
 Prokaryotic type

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Last updated: June 1, 2020
Classification taken and modified from TRANSFAC 7.0