 Eukaryotic type
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 Basic leucine zipper (bZIP)
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Basic helix-loop-helix (bHLH)
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Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
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Other basic domains
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Zinc finger
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Helix-turn-helix
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Homeo domain ANTP: HOXL
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Homeo domain ANTP: NKL
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Homeo domain Paired-related
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Homeo domain LIM
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Homeo domain POU
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Homeo domain SINE
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Homeo domain ZF
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Homeo domain CUT
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Homeo domain PROS
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Homeo domain TALE
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Homeo domain other
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Fork head/winged helix developmental regulators
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Fork head/winged helix tissue-specific regulators
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Fork head/winged helix cell cycle-controlling factors, E2F
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Fork head/winged helix cell cycle-controlling factors, DP
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Fork head/winged helix other regulators
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Heat shock factors
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Tryptophan clusters Myb, Myb-factors
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Tryptophan clusters Myb, Myb-like factors
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Tryptophan clusters Ets-type
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 K09428 ELF1_2_4; E74-like factor 1/2/4
K09429 K09429, ELF3; E74-like factor 3
K17101 ELF5; E74-like factor 5
K17102 EHF; ETS homologous factor
K04375 ELK1; ETS domain-containing protein Elk-1
K09430 ELK3; ETS domain-containing protein Elk-3 (SRF accessory protein 2)
K04376 ELK4, SAP1; ETS domain-containing protein Elk-4
K09431 ETV1; ets translocation variant 1
K09432 ETV2, ER71; ETS translocation variant 2
K09433 ETV3; ETS translocation variant 3
K15592 ETV4; ets translocation variant 4
K15593 ETV5; ets translocation variant 5
K03211 ETV6_7, yan; ETS translocation variant 6/7
K09434 ERF; ETS domain-containing transcription factor ERF
K02678 ETS1, pnt; C-ets-1
K21932 ETS2; C-ets-2
K09435 ERG; transcriptional regulator ERG
K09436 FLI1; friend leukemia integration 1 transcription factor
K09437 FEV; ETS oncogene family protein FEV
K09438 SPI1; transcription factor PU.1
K09439 SPIB; transcription factor Spi-B
K09440 SPIC; transcription factor Spi-C
K09441 GABPA; GA-binding protein transcription factor, alpha
K09442 SPDEF; SAM pointed domain-containing ETS transcription factor
K09443 K09443; ETS-type family, other
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Tryptophan clusters interferon-regulating factors
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TEA domain
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ARID
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beta-Scaffold factors with minor groove contacts
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Other transcription factors
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Prokaryotic type
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Transcription Factors