KEGG Orthology (KO) - Leptothrix cholodnii

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     KO 
 09100 Metabolism

 





   09101 Carbohydrate metabolism





     00010 Glycolysis / Gluconeogenesis [PATH:lch00010]





     00020 Citrate cycle (TCA cycle) [PATH:lch00020]





     00030 Pentose phosphate pathway [PATH:lch00030]





     00040 Pentose and glucuronate interconversions [PATH:lch00040]





     00051 Fructose and mannose metabolism [PATH:lch00051]





     00052 Galactose metabolism [PATH:lch00052]





     00053 Ascorbate and aldarate metabolism [PATH:lch00053]





     00500 Starch and sucrose metabolism [PATH:lch00500]





     00520 Amino sugar and nucleotide sugar metabolism [PATH:lch00520]





     00620 Pyruvate metabolism [PATH:lch00620]





     00630 Glyoxylate and dicarboxylate metabolism [PATH:lch00630]





       Lcho_1744 isocitrate lyase
       Lcho_3063 acetate--CoA ligase
       Lcho_4166 malate synthase G
       Lcho_2708 malate dehydrogenase
       Lcho_2701 citrate synthase I
       Lcho_2711 aconitate hydratase 2
       Lcho_0040 acetyl-CoA acetyltransferase
       Lcho_3854 acetyl-CoA acetyltransferase
       Lcho_4205 acetyl-CoA acetyltransferase
       Lcho_2370 Propanoyl-CoA C-acyltransferase
       Lcho_2086 acetyl-CoA acetyltransferase
       Lcho_2085 acetoacetyl-CoA reductase
       Lcho_3597 MaoC domain protein dehydratase
       Lcho_2693 Carbamoyl-phosphate synthase L chain ATP-binding
       Lcho_2694 carboxyl transferase
       Lcho_2697 methylmalonyl-CoA mutase, large subunit
       Lcho_3260 FAD linked oxidase domain protein
       Lcho_1170 FAD linked oxidase domain protein
       Lcho_1171 FAD linked oxidase domain protein
       Lcho_3259 FAD linked oxidase domain protein
       Lcho_1172 protein of unknown function DUF224 cysteine-rich region domain protein
       Lcho_3258 protein of unknown function DUF224 cysteine-rich region domain protein
       Lcho_4379 Catalase
       Lcho_4179 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
       Lcho_1989 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
       Lcho_0590 HAD-superfamily hydrolase, subfamily IA, variant 1
       Lcho_3752 HAD-superfamily hydrolase, subfamily IA, variant 1
       Lcho_3898 phosphoglycolate phosphatase
       Lcho_3767 Ribulose-bisphosphate carboxylase
       Lcho_3581 glutamine synthetase, type I
       Lcho_0166 glutamine synthetase, type III
       Lcho_1739 Glutamate--putrescine ligase
       Lcho_2927 Glycine hydroxymethyltransferase
       Lcho_1559 glycine dehydrogenase
       Lcho_1561 glycine cleavage system T protein
       Lcho_0173 glycine cleavage T protein (aminomethyl transferase)
       Lcho_0155 glycine cleavage T protein (aminomethyl transferase)
       Lcho_1648 dihydrolipoamide dehydrogenase
       Lcho_2881 dihydrolipoamide dehydrogenase
       Lcho_1560 glycine cleavage system H protein
       Lcho_1135 glyoxylate carboligase
       Lcho_2411 Xylose isomerase domain protein TIM barrel
       Lcho_1134 hydroxypyruvate isomerase
       Lcho_1123 2-hydroxy-3-oxopropionate reductase
       Lcho_1133 2-hydroxy-3-oxopropionate reductase
       Lcho_1132 Hydroxypyruvate reductase
       Lcho_3177 Hydroxypyruvate reductase
       Lcho_2992 tartrate dehydrogenase
       Lcho_3176 tartrate dehydrogenase
       Lcho_2918 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase
       Lcho_2749 hypothetical protein
       Lcho_3728 molybdopterin oxidoreductase
       Lcho_2750 formate dehydrogenase, alpha subunit
       Lcho_3727 4Fe-4S ferredoxin iron-sulfur binding domain protein
       Lcho_2751 NADH dehydrogenase (quinone)
       Lcho_3725 formate dehydrogenase, gamma subunit
       Lcho_2752 NADH dehydrogenase (ubiquinone) 24 kDa subunit
       Lcho_2976 conserved hypothetical protein
       Lcho_0174 formyltetrahydrofolate deformylase
       Lcho_1303 formyltetrahydrofolate deformylase
       Lcho_3290 formyltetrahydrofolate deformylase
       Lcho_0159 N-formylglutamate amidohydrolase



K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
K01638 aceB; malate synthase [EC:2.3.3.9]
K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
K01647 CS; citrate synthase [EC:2.3.3.1]
K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3]
K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
K03781 katE; catalase [EC:1.11.1.6]
K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
K01915 glnA; glutamine synthetase [EC:6.3.1.2]
K01915 glnA; glutamine synthetase [EC:6.3.1.2]
K01915 glnA; glutamine synthetase [EC:6.3.1.2]
K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
K02437 gcvH; glycine cleavage system H protein
K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47]
K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
K00124 fdoH; formate dehydrogenase iron-sulfur subunit
K00124 fdoH; formate dehydrogenase iron-sulfur subunit
K00127 fdoI; formate dehydrogenase subunit gamma
K00127 fdoI; formate dehydrogenase subunit gamma
K01432 AFMID; arylformamidase [EC:3.5.1.9]
K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]





     00640 Propanoate metabolism [PATH:lch00640]





     00650 Butanoate metabolism [PATH:lch00650]





     00660 C5-Branched dibasic acid metabolism [PATH:lch00660]





     00562 Inositol phosphate metabolism [PATH:lch00562]





 







   09102 Energy metabolism





 







   09103 Lipid metabolism





 







   09104 Nucleotide metabolism





 







   09105 Amino acid metabolism





     00250 Alanine, aspartate and glutamate metabolism [PATH:lch00250]





     00260 Glycine, serine and threonine metabolism [PATH:lch00260]





       Lcho_1674 aspartate kinase
       Lcho_1678 aspartate-semialdehyde dehydrogenase
       Lcho_2025 Homoserine dehydrogenase
       Lcho_1060 homoserine kinase
       Lcho_2024 threonine synthase
       Lcho_1555 Threonine aldolase
       Lcho_2927 Glycine hydroxymethyltransferase
       Lcho_4179 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
       Lcho_1989 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
       Lcho_1132 Hydroxypyruvate reductase
       Lcho_3177 Hydroxypyruvate reductase
       Lcho_3514 phosphoglycerate mutase 1 family
       Lcho_3955 Phosphoglycerate mutase
       Lcho_3812 Phosphoglycerate mutase
       Lcho_1907 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
       Lcho_3015 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
       Lcho_0717 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
       Lcho_3627 D-isomer specific 2-hydroxyacid dehydrogenase catalytic region
       Lcho_3014 phosphoserine aminotransferase
       Lcho_2007 phosphoserine phosphatase SerB
       Lcho_1418 amine oxidase
       Lcho_1559 glycine dehydrogenase
       Lcho_1561 glycine cleavage system T protein
       Lcho_0173 glycine cleavage T protein (aminomethyl transferase)
       Lcho_0155 glycine cleavage T protein (aminomethyl transferase)
       Lcho_1648 dihydrolipoamide dehydrogenase
       Lcho_2881 dihydrolipoamide dehydrogenase
       Lcho_1560 glycine cleavage system H protein
       Lcho_2890 CDP-diacylglycerol--serine O-phosphatidyltransferase
       Lcho_0329 L-serine dehydratase 1
       Lcho_3416 threonine dehydratase, biosynthetic
       Lcho_0086 D-serine deaminase
       Lcho_1683 tryptophan synthase, alpha subunit
       Lcho_1682 tryptophan synthase, beta subunit



K00928 lysC; aspartate kinase [EC:2.7.2.4]
K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
K01733 thrC; threonine synthase [EC:4.2.3.1]
K01620 ltaE; threonine aldolase [EC:4.1.2.48]
K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
K00274 MAO; monoamine oxidase [EC:1.4.3.4]
K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
K02437 gcvH; glycine cleavage system H protein
K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]





     00270 Cysteine and methionine metabolism [PATH:lch00270]





     00280 Valine, leucine and isoleucine degradation [PATH:lch00280]





     00290 Valine, leucine and isoleucine biosynthesis [PATH:lch00290]





     00300 Lysine biosynthesis [PATH:lch00300]





     00310 Lysine degradation [PATH:lch00310]





     00220 Arginine biosynthesis [PATH:lch00220]





     00330 Arginine and proline metabolism [PATH:lch00330]





     00340 Histidine metabolism [PATH:lch00340]





     00350 Tyrosine metabolism [PATH:lch00350]





     00360 Phenylalanine metabolism [PATH:lch00360]





     00380 Tryptophan metabolism [PATH:lch00380]





     00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:lch00400]





 







   09106 Metabolism of other amino acids





 







   09107 Glycan biosynthesis and metabolism





 







   09108 Metabolism of cofactors and vitamins





     00730 Thiamine metabolism [PATH:lch00730]





     00740 Riboflavin metabolism [PATH:lch00740]





     00750 Vitamin B6 metabolism [PATH:lch00750]





     00760 Nicotinate and nicotinamide metabolism [PATH:lch00760]





     00770 Pantothenate and CoA biosynthesis [PATH:lch00770]





     00780 Biotin metabolism [PATH:lch00780]





     00785 Lipoic acid metabolism [PATH:lch00785]





       Lcho_0400 lipoate-protein ligase B
       Lcho_0401 lipoic acid synthetase
       Lcho_1648 dihydrolipoamide dehydrogenase
       Lcho_2881 dihydrolipoamide dehydrogenase
       Lcho_1646 2-oxo-acid dehydrogenase E1 subunit, homodimeric type
       Lcho_1647 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
       Lcho_2884 2-oxoglutarate dehydrogenase, E1 subunit
       Lcho_2883 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase
       Lcho_1559 glycine dehydrogenase
       Lcho_1561 glycine cleavage system T protein
       Lcho_0173 glycine cleavage T protein (aminomethyl transferase)
       Lcho_0155 glycine cleavage T protein (aminomethyl transferase)
       Lcho_1560 glycine cleavage system H protein



K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
K03644 lipA; lipoyl synthase [EC:2.8.1.8]
K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
K02437 gcvH; glycine cleavage system H protein





     00790 Folate biosynthesis [PATH:lch00790]





     00670 One carbon pool by folate [PATH:lch00670]





       Lcho_1259 Dihydrofolate reductase
       Lcho_1643 Methenyltetrahydrofolate cyclohydrolase
       Lcho_0175 Methenyltetrahydrofolate cyclohydrolase
       Lcho_2927 Glycine hydroxymethyltransferase
       Lcho_0740 phosphoribosylglycinamide formyltransferase
       Lcho_0532 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
       Lcho_0351 methionyl-tRNA formyltransferase
       Lcho_1561 glycine cleavage system T protein
       Lcho_0173 glycine cleavage T protein (aminomethyl transferase)
       Lcho_0155 glycine cleavage T protein (aminomethyl transferase)
       Lcho_3268 homocysteine S-methyltransferase
       Lcho_3270 methionine synthase
       Lcho_1260 Thymidylate synthase
       Lcho_0174 formyltetrahydrofolate deformylase
       Lcho_1303 formyltetrahydrofolate deformylase
       Lcho_3290 formyltetrahydrofolate deformylase
       Lcho_0117 5,10-methylenetetrahydrofolate reductase
       Lcho_0115 5-formyltetrahydrofolate cyclo-ligase



K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
K00560 thyA; thymidylate synthase [EC:2.1.1.45]
K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]





     00830 Retinol metabolism





     00860 Porphyrin metabolism [PATH:lch00860]





     00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:lch00130]





 







   09109 Metabolism of terpenoids and polyketides





 







   09110 Biosynthesis of other secondary metabolites





 







   09111 Xenobiotics biodegradation and metabolism





 







   09112 Not included in regular maps





 







 09120 Genetic Information Processing





 







 09130 Environmental Information Processing





 







 09140 Cellular Processes





 







 09150 Organismal Systems





 







 09160 Human Diseases





 







 09180 Brite Hierarchies





 







 09190 Not Included in Pathway or Brite













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Last updated: April 21, 2024