Transcription Factors - Larimichthys crocea (large yellow croaker)

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     KO
 Eukaryotic type
   Basic leucine zipper (bZIP)
   Basic helix-loop-helix (bHLH)
     Ubiquitous (class A) factors
     Myogenic transcription factors
     Achaete-Scute
     Tal/Twist/Atonal/Hen, Lymphoid factors
     Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
     Tal/Twist/Atonal/Hen, HEN
     Tal/Twist/Atonal/Hen, Mesp
     Tal/Twist/Atonal/Hen, Atonal
     Tal/Twist/Atonal/Hen, Pancreatic factors
     Hairy, Hairy/E(SPL)
     Hairy, Fungal regulators
     Factors with PAS domain
       104924856 aryl hydrocarbon receptor
       104927405 aryl hydrocarbon receptor
       104938135 aryl hydrocarbon receptor
       104924857 aryl hydrocarbon receptor
       104927411 aryl hydrocarbon receptor
       104929264 ahrr; aryl hydrocarbon receptor repressor isoform X1
       104922402 epas1; endothelial PAS domain-containing protein 1
       104921576 hif1a; hypoxia-inducible factor 1-alpha
       104931226 hypoxia-inducible factor 1-alpha isoform X1
       104936228 endothelial PAS domain-containing protein 1 isoform X1
       104920544 aryl hydrocarbon receptor nuclear translocator isoform X1
       104925525 arnt2; aryl hydrocarbon receptor nuclear translocator 2 isoform X1
       104937207 npas1; neuronal PAS domain-containing protein 1
       104924826 npas3; neuronal PAS domain-containing protein 3 isoform X1
       104934254 neuronal PAS domain-containing protein 2 isoform X1
       104939547 circadian locomoter output cycles protein kaput isoform X1
       104919094 clock; circadian locomoter output cycles protein kaput isoform X1
       104922642 aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform X2
       104930110 aryl hydrocarbon receptor nuclear translocator-like protein 1
       104939173 aryl hydrocarbon receptor nuclear translocator-like protein 1
       104937695 aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform X1
       104937131 sim2; single-minded homolog 2 isoform X1
       104926745 single-minded homolog 1 isoform X1
K09093 AHR; aryl hydrocarbon receptor 
K09093 AHR; aryl hydrocarbon receptor 
K09093 AHR; aryl hydrocarbon receptor 
K09093 AHR; aryl hydrocarbon receptor 
K09093 AHR; aryl hydrocarbon receptor 
K09094 AHRR; aryl hydrocarbon receptor repressor 
K08268 HIF1A; hypoxia-inducible factor 1 alpha 
K08268 HIF1A; hypoxia-inducible factor 1 alpha 
K08268 HIF1A; hypoxia-inducible factor 1 alpha 
K09095 HIF2A; hypoxia-inducible factor 2 alpha 
K09097 ARNT; aryl hydrocarbon receptor nuclear translocator 
K15589 ARNT2; aryl hydrocarbon receptor nuclear translocator 2 
K09098 NPAS1_3; neuronal PAS domain-containing protein 1/3 
K09098 NPAS1_3; neuronal PAS domain-containing protein 1/3 
K09026 NPAS2; neuronal PAS domain-containing protein 2 
K02223 CLOCK; circadian locomoter output cycles kaput protein [EC:2.3.1.48] 
K02223 CLOCK; circadian locomoter output cycles kaput protein [EC:2.3.1.48] 
K02296 ARNTL; aryl hydrocarbon receptor nuclear translocator-like protein 1 
K02296 ARNTL; aryl hydrocarbon receptor nuclear translocator-like protein 1 
K02296 ARNTL; aryl hydrocarbon receptor nuclear translocator-like protein 1 
K09099 ARNTL2; aryl hydrocarbon receptor nuclear translocator-like protein 2 
K09100 SIM; single-minded 
K09100 SIM; single-minded 
     INO
     HLH domain only
   Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
   Other basic domains
   Zinc finger
   Helix-turn-helix
   beta-Scaffold factors with minor groove contacts
   Other transcription factors
 
 Prokaryotic type

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Last updated: June 1, 2020
Classification taken and modified from TRANSFAC 7.0