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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:lmg03030]
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03410 Base excision repair [PATH:lmg03410]
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03420 Nucleotide excision repair [PATH:lmg03420]
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03430 Mismatch repair [PATH:lmg03430]
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03440 Homologous recombination [PATH:lmg03440]
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 LMKG_00686 single-stranded-DNA-specific exonuclease RecJ
LMKG_02284 single-stranded DNA-binding protein 1
LMKG_00006 single-stranded DNA-binding protein 3
LMKG_02512 single-strand binding protein
LMKG_02329 recombination protein F
LMKG_00755 DNA repair protein recO
LMKG_02137 recombination protein recR
LMKG_00817 recombination protein recA
LMKG_00643 DNA polymerase I
LMKG_00678 Holliday junction DNA helicase RuvA
LMKG_00679 Holliday junction DNA helicase RuvB
LMKG_00527 ATP-dependent DNA helicase RecG
LMKG_00702 RecD/TraA family helicase
LMKG_03183 DNA polymerase III alpha subunit
LMKG_00899 DNA polymerase III alpha subunit
LMKG_02332 DNA polymerase subunit III
LMKG_02135 DNA polymerase III subunits gamma and Tau
LMKG_00732 DNA polymerase III subunit delta
LMKG_03059 DNA polymerase III subunit delta'
LMKG_00514 primosome assembly protein PriA
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:lmg03000]
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03021 Transcription machinery [BR:lmg03021]
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03019 Messenger RNA biogenesis [BR:lmg03019]
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03041 Spliceosome
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03011 Ribosome [BR:lmg03011]
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03009 Ribosome biogenesis [BR:lmg03009]
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03016 Transfer RNA biogenesis [BR:lmg03016]
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03012 Translation factors [BR:lmg03012]
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03110 Chaperones and folding catalysts [BR:lmg03110]
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04131 Membrane trafficking [BR:lmg04131]
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04121 Ubiquitin system [BR:lmg04121]
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03051 Proteasome [BR:lmg03051]
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03032 DNA replication proteins [BR:lmg03032]
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03036 Chromosome and associated proteins [BR:lmg03036]
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03400 DNA repair and recombination proteins [BR:lmg03400]
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LMKG_01928 methylated-DNA-protein-cysteine methyltransferase
LMKG_01304 deoxyribodipyrimidine photolyase
LMKG_01700 uracil-DNA glycosylase 2
LMKG_01521 uracil-DNA glycosylase 1
LMKG_02364 DNA-3-methyladenine glycosylase
LMKG_03186 A/G-specific adenine glycosylase
LMKG_00441 endonuclease III
LMKG_03064 conserved hypothetical protein
LMKG_00978 MutT/nudix family protein
LMKG_00579 MutT/nudix family protein
LMKG_03047 MutT/nudix family protein
LMKG_02968 MutT/nudix family protein
LMKG_02665 deoxyuridine 5'-triphosphate nucleotidohydrolase
LMKG_02250 ADA regulatory protein
LMKG_00064 conserved hypothetical protein
LMKG_00065 methylated-DNA-protein-cysteine methyltransferase family
LMKG_00561 DNA-3-methyladenine glycosylase I
LMKG_00644 formamidopyrimidine-DNA glycosylase
LMKG_03095 exodeoxyribonuclease
LMKG_00766 endonuclease IV
LMKG_00686 single-stranded-DNA-specific exonuclease RecJ
LMKG_02595 NAD-dependent DNA ligase LigA
LMKG_00643 DNA polymerase I
LMKG_02550 excinuclease ABC uvrA
LMKG_02549 excinuclease ABC subunit B
LMKG_03119 excinuclease ABC subunit C
LMKG_02594 ATP-dependent DNA helicase PcrA
LMKG_01666 RNA polymerase
LMKG_01665 RNA polymerase
LMKG_02900 DNA-directed RNA polymerase subunit alpha
LMKG_02953 DNA-directed RNA polymerase
LMKG_00512 DNA-directed RNA polymerase
LMKG_02759 transcription-repair coupling factor
LMKG_00812 DNA mismatch repair protein mutS
LMKG_03121 recombination and DNA strand exchange inhibitor protein
LMKG_00811 DNA mismatch repair protein mutL
LMKG_00857 exodeoxyribonuclease VII large subunit
LMKG_00856 exodeoxyribonuclease VII
LMKG_03183 DNA polymerase III alpha subunit
LMKG_00899 DNA polymerase III alpha subunit
LMKG_02332 DNA polymerase subunit III
LMKG_00732 DNA polymerase III subunit delta
LMKG_03059 DNA polymerase III subunit delta'
LMKG_02135 DNA polymerase III subunits gamma and Tau
LMKG_02284 single-stranded DNA-binding protein 1
LMKG_00006 single-stranded DNA-binding protein 3
LMKG_02512 single-strand binding protein
LMKG_01820 DNA-methyltransferase
LMKG_00702 RecD/TraA family helicase
LMKG_00817 recombination protein recA
LMKG_00678 Holliday junction DNA helicase RuvA
LMKG_00679 Holliday junction DNA helicase RuvB
LMKG_00514 primosome assembly protein PriA
LMKG_00555 exonuclease
LMKG_00554 conserved hypothetical protein
LMKG_01694 DNA repair protein RadA
LMKG_02329 recombination protein F
LMKG_00527 ATP-dependent DNA helicase RecG
LMKG_00755 DNA repair protein recO
LMKG_02137 recombination protein recR
LMKG_00850 DNA repair protein RecN
LMKG_00444 recombination protein U
LMKG_00008 recombination protein U
LMKG_00039 ATP-dependent nuclease
LMKG_00038 ATP-dependent nuclease, subunit B
LMKG_02327 DNA gyrase subunit A
LMKG_02328 DNA gyrase subunit B
LMKG_00947 DNA topoisomerase I
LMKG_00400 conserved hypothetical protein
LMKG_00391 ATP-dependent DNA helicase, RecQ family protein
LMKG_02081 ATP-dependent DNA helicase RecQ
LMKG_00354 DNA polymerase IV
LMKG_02980 ImpB/MucB/SamB family protein
LMKG_02172 nucleotidyltransferase/DNA polymerase
LMKG_00918 LexA repressor
LMKG_02663 regulatory protein recX
LMKG_03177 PHP domain-containing protein
LMKG_00436 bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon
LMKG_03197 ribonucleotide-diphosphate reductase subunit alpha
LMKG_00160 ribonucleotide-diphosphate reductase subunit beta
LMKG_00631 DHH subfamily 1 protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03700 recU; recombination protein U
K03700 recU; recombination protein U
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K03502 umuC; DNA polymerase V
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K02347 polX; DNA polymerase (family X)
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:lmg03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Listeria monocytogenes FSL R2-561