KEGG Orthology (KO) - Listeria monocytogenes Finland 1998

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:lms03000]
     03021 Transcription machinery [BR:lms03021]
     03019 Messenger RNA biogenesis [BR:lms03019]
     03041 Spliceosome
     03011 Ribosome [BR:lms03011]
     03009 Ribosome biogenesis [BR:lms03009]
       LMLG_2047 ribonuclease III
       LMLG_2567 GTP-binding protein Era
       LMLG_1793 GTPase ObgE
       LMLG_1904 transcription termination factor NusA
       LMLG_1944 transcription antitermination factor NusB
       LMLG_0812 transcription termination/antitermination factor NusG
       LMLG_0941 ribosomal small subunit pseudouridine synthase A
       LMLG_2397 dimethyladenosine transferase
       LMLG_2065 ribosomal RNA small subunit methyltransferase B
       LMLG_0805 conserved hypothetical protein
       LMLG_0376 RsmD family RNA methyltransferase
       LMLG_2558 conserved hypothetical protein
       LMLG_0223 16S rRNA methyltransferase GidB
       LMLG_0389 methylase MraW
       LMLG_2872 conserved hypothetical protein
       LMLG_1951 hemolysin A
       LMLG_2243 conserved hypothetical protein
       LMLG_0817 RNA methyltransferase
       LMLG_0756 conserved hypothetical protein
       LMLG_0545 conserved hypothetical protein
       LMLG_2748 cfr family radical SAM enzyme
       LMLG_1486 23S rRNA (uracil-5-)-methyltransferase RumA
       LMLG_3000 ribosomal large subunit pseudouridine synthase B
       LMLG_0904 ribosomal large subunit pseudouridine synthase D
       LMLG_2085 ribosomal large subunit pseudouridine synthase
       LMLG_2957 ribosomal large subunit pseudouridine synthase
       LMLG_0351 ribosomal-protein-alanine acetyltransferase
       LMLG_1543 acetyltransferase
       LMLG_3026 acetyltransferase
       LMLG_2851 16S rRNA processing protein RimM
       LMLG_2557 50S ribosomal protein L11 methyltransferase
       LMLG_1787 ribonuclease
       LMLG_0818 ribonuclease III
       LMLG_1351 ATP-dependent RNA helicase DeaD
       LMLG_1011 ATP-dependent RNA helicase DbpA
       LMLG_1672 dead/deah box ATP dependent helicase
       LMLG_2062 ribosome small subunit-dependent GTPase A
       LMLG_1915 conserved hypothetical protein
       LMLG_0496 ribosome-associated GTPase EngA
       LMLG_0980 ribosome biogenesis GTP-binding protein YlqF
       LMLG_1597 GTP-binding protein HflX
       LMLG_2672 GTP-binding protein HflX
       LMLG_2536 ribosome biogenesis GTPase YqeH
       LMLG_2772 Sua5/YciO/YrdC/YwlC family protein
       LMLG_1909 ribosome-binding factor A
       LMLG_1903 UPF0090 protein
       LMLG_2541 conserved hypothetical protein
       LMLG_2564 conserved hypothetical protein
       LMLG_2538 conserved hypothetical protein
       LMLG_0246 GTP-binding protein YchF
K03685 rnc; ribonuclease III [EC:3.1.26.3]
K03595 era; GTPase
K03979 obgE; GTPase [EC:3.6.5.-]
K02600 nusA; transcription termination/antitermination protein NusA
K03625 nusB; transcription antitermination protein NusB
K02601 nusG; transcription termination/antitermination protein NusG
K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
K02860 rimM; 16S rRNA processing protein RimM
K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
K08301 rng; ribonuclease G [EC:3.1.26.-]
K11145 K11145; ribonuclease III family protein [EC:3.1.26.-]
K05592 deaD; ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
K05592 deaD; ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
K18692 cshB; ATP-dependent RNA helicase CshB [EC:3.6.4.13]
K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
K03977 engA; GTPase
K14540 rbgA; ribosome biogenesis GTPase A
K03665 hflX; GTPase
K03665 hflX; GTPase
K06948 yqeH; 30S ribosome assembly GTPase
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
K02834 rbfA; ribosome-binding factor A
K09748 rimP; ribosome maturation factor RimP
K09710 ybeB; ribosome-associated protein
K07042 ybeY; probable rRNA maturation factor
K07574 yhbY; RNA-binding protein
K06942 ychF; ribosome-binding ATPase
     03016 Transfer RNA biogenesis [BR:lms03016]
     03012 Translation factors [BR:lms03012]
     03110 Chaperones and folding catalysts [BR:lms03110]
     04131 Membrane trafficking [BR:lms04131]
     04121 Ubiquitin system [BR:lms04121]
     03051 Proteasome [BR:lms03051]
     03032 DNA replication proteins [BR:lms03032]
     03036 Chromosome and associated proteins [BR:lms03036]
     03400 DNA repair and recombination proteins [BR:lms03400]
     03029 Mitochondrial biogenesis [BR:lms03029]
 
   09183 Protein families: signaling and cellular processes
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: January 17, 2020