KEGG Orthology (KO) - Mycobacterium sp. JLS

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     KO
 09100 Metabolism
 
   09101 Carbohydrate metabolism
 
   09102 Energy metabolism
 
   09103 Lipid metabolism
 
   09104 Nucleotide metabolism
 
   09105 Amino acid metabolism
 
   09106 Metabolism of other amino acids
 
   09107 Glycan biosynthesis and metabolism
 
   09108 Metabolism of cofactors and vitamins
     00730 Thiamine metabolism [PATH:mjl00730]
     00740 Riboflavin metabolism [PATH:mjl00740]
     00750 Vitamin B6 metabolism [PATH:mjl00750]
     00760 Nicotinate and nicotinamide metabolism [PATH:mjl00760]
     00770 Pantothenate and CoA biosynthesis [PATH:mjl00770]
     00780 Biotin metabolism [PATH:mjl00780]
     00785 Lipoic acid metabolism [PATH:mjl00785]
     00790 Folate biosynthesis [PATH:mjl00790]
     00670 One carbon pool by folate [PATH:mjl00670]
     00830 Retinol metabolism
     00860 Porphyrin and chlorophyll metabolism [PATH:mjl00860]
       Mjls_1899 glutamyl-tRNA synthetase
       Mjls_5322 Glutamate--tRNA ligase
       Mjls_0669 glutamyl-tRNA reductase
       Mjls_0683 glutamate-1-semialdehyde 2
       Mjls_0672 porphobilinogen synthase
       Mjls_0670 hydroxymethylbilane synthase
       Mjls_0253 Uroporphyrinogen III synthase HEM4
       Mjls_2201 uroporphyrinogen decarboxylase
       Mjls_2202 protoporphyrinogen oxidase
       Mjls_2495 Ferrochelatase
       Mjls_0671 uroporphyrinogen-III C-methyltransferase
       Mjls_2057 uroporphyrinogen-III C-methyltransferase
       Mjls_2455 protoheme IX farnesyltransferase
       Mjls_2467 cytochrome oxidase assembly
       Mjls_2524 precorrin-2 C20-methyltransferase / cobalt-factor II C20-methyltransferase
       Mjls_2526 precorrin-3B synthase
       Mjls_2521 precorrin-4 C11-methyltransferase
       Mjls_4718 precorrin-6A synthase (deacetylating)
       Mjls_2522 precorrin-6A reductase
       Mjls_2520 precorrin-6Y C5
       Mjls_2525 precorrin-8X methylmutase
       Mjls_2056 hydrogenobyrinic acid a
       Mjls_2533 cobaltochelatase CobN subunit
       Mjls_3859 ATP:cob(I)alamin adenosyltransferase
       Mjls_2055 cob(I)yrinic acid a
       Mjls_2034 adenosylcobyric acid synthase (glutamine-hydrolysing)
       Mjls_3360 adenosylcobinamide-phosphate synthase
       Mjls_3315 adenosylcobinamide kinase
       Mjls_3317 cobalamin-5'-phosphate synthase
       Mjls_3316 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
       Mjls_3353 Phosphoglycerate mutase
       Mjls_2054 protoporphyrin IX magnesium-chelatase
       Mjls_4694 putative magnesium chelatase
       Mjls_1438 cell division protein SufI
       Mjls_1440 cell division protein SufI
       Mjls_2787 bacterioferritin
       Mjls_5419 Ferritin
       Mjls_4521 multicopper oxidase
K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.99.1.1 4.99.1.9]
K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
K02257 COX10; heme o synthase [EC:2.5.1.141]
K02259 COX15; cytochrome c oxidase assembly protein subunit 15
K13540 cobIJ; precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase [EC:2.1.1.130 2.1.1.131]
K02229 cobG; precorrin-3B synthase [EC:1.14.13.83]
K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
K00595 cobL; precorrin-6Y C5,15-methyltransferase (decarboxylating) [EC:2.1.1.132]
K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
K08100 E1.3.3.5; bilirubin oxidase [EC:1.3.3.5]
K08100 E1.3.3.5; bilirubin oxidase [EC:1.3.3.5]
K03594 bfr; bacterioferritin [EC:1.16.3.1]
K22336 bfrB; bacterioferritin B [EC:1.16.3.1]
K22552 mmcO; multicopper oxidase [EC:1.16.3.1]
     00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:mjl00130]
 
   09109 Metabolism of terpenoids and polyketides
 
   09110 Biosynthesis of other secondary metabolites
 
   09111 Xenobiotics biodegradation and metabolism
 
   09112 Not included in regular maps
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
     03030 DNA replication [PATH:mjl03030]
       Mjls_3300 DNA polymerase III
       Mjls_5268 DNA polymerase III
       Mjls_3107 error-prone DNA polymerase
       Mjls_5277 DNA polymerase III
       Mjls_5180 DNA polymerase III
       Mjls_3523 DNA polymerase III
       Mjls_0002 DNA polymerase III
       Mjls_5742 primary replicative DNA helicase
       Mjls_3453 DNA primase
       Mjls_5745 single-strand binding protein
       Mjls_3621 single-strand binding protein
       Mjls_4730 ribonuclease H
       Mjls_3353 Phosphoglycerate mutase
       Mjls_1952 RNase HII
       Mjls_3026 DNA polymerase I
       Mjls_1861 DNA ligase
       Mjls_1780 DNA ligase I
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02314 dnaB; replicative DNA helicase [EC:3.6.4.12]
K02316 dnaG; DNA primase [EC:2.7.7.101]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
     03410 Base excision repair [PATH:mjl03410]
     03420 Nucleotide excision repair [PATH:mjl03420]
     03430 Mismatch repair [PATH:mjl03430]
     03440 Homologous recombination [PATH:mjl03440]
     03450 Non-homologous end-joining [PATH:mjl03450]
     03460 Fanconi anemia pathway
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:mjl03000]
     03021 Transcription machinery [BR:mjl03021]
     03019 Messenger RNA biogenesis [BR:mjl03019]
     03041 Spliceosome
     03011 Ribosome [BR:mjl03011]
     03009 Ribosome biogenesis [BR:mjl03009]
     03016 Transfer RNA biogenesis [BR:mjl03016]
     03012 Translation factors [BR:mjl03012]
     03110 Chaperones and folding catalysts [BR:mjl03110]
     04131 Membrane trafficking [BR:mjl04131]
     04121 Ubiquitin system [BR:mjl04121]
     03051 Proteasome [BR:mjl03051]
     03032 DNA replication proteins [BR:mjl03032]
       Mjls_4730 ribonuclease H
       Mjls_1780 DNA ligase I
       Mjls_0824 DNA-cytosine methyltransferase
       Mjls_1903 bacterial nucleoid protein Hbs
       Mjls_0001 chromosomal replication initiator protein DnaA
       Mjls_5742 primary replicative DNA helicase
       Mjls_3453 DNA primase
       Mjls_5745 single-strand binding protein
       Mjls_3621 single-strand binding protein
       Mjls_3107 error-prone DNA polymerase
       Mjls_0002 DNA polymerase III
       Mjls_3523 DNA polymerase III
       Mjls_5180 DNA polymerase III
       Mjls_3300 DNA polymerase III
       Mjls_5268 DNA polymerase III
       Mjls_5277 DNA polymerase III
       Mjls_3353 Phosphoglycerate mutase
       Mjls_1952 RNase HII
       Mjls_3026 DNA polymerase I
       Mjls_1861 DNA ligase
       Mjls_5722 DNA gyrase/topoisomerase IV
       Mjls_0007 DNA gyrase subunit A
       Mjls_5721 DNA topoisomerase (ATP-hydrolyzing)
       Mjls_0006 DNA gyrase subunit B
       Mjls_5182 DNA topoisomerase I
       Mjls_1308 conserved hypothetical protein
K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
K03530 hupB; DNA-binding protein HU-beta
K02313 dnaA; chromosomal replication initiator protein
K02314 dnaB; replicative DNA helicase [EC:3.6.4.12]
K02316 dnaG; DNA primase [EC:2.7.7.101]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
     03036 Chromosome and associated proteins [BR:mjl03036]
     03400 DNA repair and recombination proteins [BR:mjl03400]
     03029 Mitochondrial biogenesis [BR:mjl03029]
 
   09183 Protein families: signaling and cellular processes
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: July 18, 2019