Messenger RNA Biogenesis - Mus musculus (mouse)

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     KO
 Eukaryotic type
   mRNA processing factors
   mRNA surveillance and transport factors
     Transport factors
       EJC complex
       TREX complex
       TREX-2 complex
       Nuclear pore complex
       Ran-mediated transport factors
       eIF4F and regulatory proteins
         13684 Eif4e; eukaryotic translation initiation factor 4E
         26987 Eif4e2; eukaryotic translation initiation factor 4E member 2
         218268 Eif4e1b; eukaryotic translation initiation factor 4E family member 1B
         13682 Eif4a2; eukaryotic translation initiation factor 4A2
         13681 Eif4a1; eukaryotic translation initiation factor 4A1
         13690 Eif4g2; eukaryotic translation initiation factor 4, gamma 2
         230861 Eif4g3; eukaryotic translation initiation factor 4 gamma, 3
         208643 Eif4g1; eukaryotic translation initiation factor 4, gamma 1
         75705 Eif4b; eukaryotic translation initiation factor 4B
         22384 Eif4h; eukaryotic translation initiation factor 4H
         13685 Eif4ebp1; eukaryotic translation initiation factor 4E binding protein 1
         13688 Eif4ebp2; eukaryotic translation initiation factor 4E binding protein 2
         108112 Eif4ebp3; eukaryotic translation initiation factor 4E binding protein 3
         74203 Eif4enif1; eukaryotic translation initiation factor 4E nuclear import factor 1
         52477 Angel2; angel homolog 2
         68737 Angel1; angel homolog 1
         14265 Fmr1; FMRP translational regulator 1
         14359 Fxr1; fragile X mental retardation gene 1, autosomal homolog
         23879 Fxr2; fragile X mental retardation, autosomal homolog 2
         20430 Cyfip1; cytoplasmic FMR1 interacting protein 1
         76884 Cyfip2; cytoplasmic FMR1 interacting protein 2
         216766 Gemin5; gem nuclear organelle associated protein 5
         21335 Tacc3; transforming, acidic coiled-coil containing protein 3
         12877 Cpeb1; cytoplasmic polyadenylation element binding protein 1
         208922 Cpeb3; cytoplasmic polyadenylation element binding protein 3
         231207 Cpeb2; cytoplasmic polyadenylation element binding protein 2
         67579 Cpeb4; cytoplasmic polyadenylation element binding protein 4
         13205 Ddx3x; DEAD box helicase 3, X-linked
         110957 D1Pas1; DNA segment, Chr 1, Pasteur Institute 1
         227331 Gigyf2; GRB10 interacting GYF protein 2
         57330 Gigyf1; GRB10 interacting GYF protein 1
         18458 Pabpc1; poly(A) binding protein, cytoplasmic 1
         93728 Pabpc5; poly(A) binding protein, cytoplasmic 5
         230721 Pabpc4; poly(A) binding protein, cytoplasmic 4
         381404 Pabpc1l; poly(A) binding protein, cytoplasmic 1-like
         67543 Pabpc6; poly(A) binding protein, cytoplasmic 6
         241989 Pabpc4l; poly(A) binding protein, cytoplasmic 4-like
         18459 Pabpc2; poly(A) binding protein, cytoplasmic 2
         245545 Pabpc1l2a; poly(A) binding protein, cytoplasmic 1-like 2A
         668382 Pabpc1l2b; poly(A) binding protein, cytoplasmic 1-like 2B
         218693 Paip1; polyadenylate binding protein-interacting protein 1
         108077 Skiv2l; superkiller viralicidic activity 2-like (S. cerevisiae)
         54006 Deaf1; DEAF1, transcription factor
         68995 Mcts1; malignant T cell amplified sequence 1
         66405 Mcts2; malignant T cell amplified sequence 2
         68184 Denr; density-regulated protein
K03259 EIF4E; translation initiation factor 4E 
K03259 EIF4E; translation initiation factor 4E 
K03259 EIF4E; translation initiation factor 4E 
K03257 EIF4A; translation initiation factor 4A 
K03257 EIF4A; translation initiation factor 4A 
K03260 EIF4G; translation initiation factor 4G 
K03260 EIF4G; translation initiation factor 4G 
K03260 EIF4G; translation initiation factor 4G 
K03258 EIF4B; translation initiation factor 4B 
K24086 EIF4H; translation initiation factor 4H 
K07205 EIF4EBP1; eukaryotic translation initiation factor 4E binding protein 1 
K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2 
K18645 EIF4EBP3; eukaryotic translation initiation factor 4E binding protein 3 
K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter 
K18729 ANGEL; protein angel 
K18729 ANGEL; protein angel 
K15516 FMR; fragile X mental retardation protein 
K15516 FMR; fragile X mental retardation protein 
K15516 FMR; fragile X mental retardation protein 
K05749 CYFIP; cytoplasmic FMR1 interacting protein 
K05749 CYFIP; cytoplasmic FMR1 interacting protein 
K13133 GEMIN5; gem associated protein 5 
K14283 TACC3; transforming acidic coiled-coil-containing protein 3 
K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:3.6.4.13] 
K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:3.6.4.13] 
K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
K13126 PABPC; polyadenylate-binding protein 
K13126 PABPC; polyadenylate-binding protein 
K13126 PABPC; polyadenylate-binding protein 
K13126 PABPC; polyadenylate-binding protein 
K13126 PABPC; polyadenylate-binding protein 
K13126 PABPC; polyadenylate-binding protein 
K13126 PABPC; polyadenylate-binding protein 
K13126 PABPC; polyadenylate-binding protein 
K13126 PABPC; polyadenylate-binding protein 
K14322 PAIP1; polyadenylate-binding protein-interacting protein 1 
K12599 SKI2; antiviral helicase SKI2 [EC:3.6.4.-] 
K23041 DEAF1; deformed epidermal autoregulatory factor 1 
K07575 MCTS; malignant T-cell-amplified sequence 
K07575 MCTS; malignant T-cell-amplified sequence 
K24272 DENR; density-regulated protein 
       Other transport factors
     Surveillance factors
     Factors involved in mRNA localization
       Cargo complex
       Factors that have mRNA localization signals
       Trans-acting binding proteins
       Other mRNA localization factors
         14265 Fmr1; FMRP translational regulator 1
         14359 Fxr1; fragile X mental retardation gene 1, autosomal homolog
         23879 Fxr2; fragile X mental retardation, autosomal homolog 2
         20430 Cyfip1; cytoplasmic FMR1 interacting protein 1
         76884 Cyfip2; cytoplasmic FMR1 interacting protein 2
         18521 Pcbp2; poly(rC) binding protein 2
         59093 Pcbp3; poly(rC) binding protein 3
         59092 Pcbp4; poly(rC) binding protein 4
         53872 Caprin1; cell cycle associated protein 1
         232560 Caprin2; caprin family member 2
         22608 Ybx1; Y box protein 1
K15516 FMR; fragile X mental retardation protein 
K15516 FMR; fragile X mental retardation protein 
K15516 FMR; fragile X mental retardation protein 
K05749 CYFIP; cytoplasmic FMR1 interacting protein 
K05749 CYFIP; cytoplasmic FMR1 interacting protein 
K13162 PCBP2; poly(rC)-binding protein 2 
K21444 PCBP3_4; poly(rC)-binding protein 3/4 
K21444 PCBP3_4; poly(rC)-binding protein 3/4 
K18743 CAPRIN1; caprin-1 
K18744 CAPRIN2; caprin-2 
K09276 YBX1; Y-box-binding protein 1 
     mRNA cycle factors
   mRNA degradation factors
 
 Prokaryotic type

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Last updated: September 2, 2020