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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:msv03030]
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03410 Base excision repair [PATH:msv03410]
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03420 Nucleotide excision repair [PATH:msv03420]
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03430 Mismatch repair [PATH:msv03430]
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03440 Homologous recombination [PATH:msv03440]
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 Mesil_2554 single-stranded-DNA-specific exonuclease RecJ
Mesil_0828 single-strand binding protein
Mesil_2840 single-strand binding protein
Mesil_3562 single-strand binding protein/Primosomal replication protein n
Mesil_0053 DNA replication and repair protein RecF
Mesil_1721 DNA repair protein RecO
Mesil_1378 recombination protein RecR
Mesil_0858 recA protein
Mesil_2224 DNA polymerase I
Mesil_1706 Holliday junction DNA helicase RuvA
Mesil_2576 Holliday junction DNA helicase RuvB
Mesil_1666 crossover junction endodeoxyribonuclease RuvC
Mesil_1459 ATP-dependent DNA helicase RecG
Mesil_1191 Helix-hairpin-helix DNA-binding class 1
Mesil_3656 AAA ATPase
Mesil_0842 DNA polymerase III, alpha subunit
Mesil_0002 DNA polymerase III, beta subunit
Mesil_0389 DNA polymerase III, subunits gamma and tau
Mesil_2524 DNA polymerase III, delta subunit
Mesil_2204 DNA polymerase III, epsilon subunit
Mesil_1583 Exonuclease RNase T and DNA polymerase III
Mesil_0035 primosomal protein N'
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:msv03000]
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03021 Transcription machinery [BR:msv03021]
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03019 Messenger RNA biogenesis [BR:msv03019]
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03041 Spliceosome
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03011 Ribosome [BR:msv03011]
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03009 Ribosome biogenesis [BR:msv03009]
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03016 Transfer RNA biogenesis [BR:msv03016]
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03012 Translation factors [BR:msv03012]
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03110 Chaperones and folding catalysts [BR:msv03110]
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04131 Membrane trafficking [BR:msv04131]
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04121 Ubiquitin system [BR:msv04121]
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03051 Proteasome
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03032 DNA replication proteins [BR:msv03032]
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03036 Chromosome and associated proteins [BR:msv03036]
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03400 DNA repair and recombination proteins [BR:msv03400]
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Mesil_1386 Deoxyribodipyrimidine photo-lyase
Mesil_0270 HhH-GPD family protein
Mesil_0091 endonuclease III
Mesil_1070 NUDIX hydrolase
Mesil_2756 NUDIX hydrolase
Mesil_3106 NUDIX hydrolase
Mesil_2549 NUDIX hydrolase
Mesil_0991 methylated-DNA/protein-cysteinemethyltransferase
Mesil_2187 phage SPO1 DNA polymerase-related protein
Mesil_3164 Uracil-DNA glycosylase superfamily
Mesil_1125 HhH-GPD family protein
Mesil_1478 formamidopyrimidine-DNA glycosylase
Mesil_2033 apurinic endonuclease Apn1
Mesil_3033 Deoxyribonuclease V
Mesil_2554 single-stranded-DNA-specific exonuclease RecJ
Mesil_2086 DNA ligase, NAD-dependent
Mesil_2224 DNA polymerase I
Mesil_2823 excinuclease ABC, A subunit
Mesil_0110 excinuclease ABC, B subunit
Mesil_1509 excinuclease ABC, C subunit
Mesil_1937 UvrD/REP helicase
Mesil_3574 UvrD/REP helicase
Mesil_0821 DNA-directed RNA polymerase, beta subunit
Mesil_0822 DNA-directed RNA polymerase, beta' subunit
Mesil_2879 DNA-directed RNA polymerase, alpha subunit
Mesil_1320 DNA-directed RNA polymerase, omega subunit
Mesil_1974 transcription factor CarD
Mesil_1520 DNA mismatch repair protein MutS
Mesil_2772 DNA mismatch repair protein MutS domain protein
Mesil_1166 MutS2 family protein
Mesil_1521 DNA mismatch repair protein MutL
Mesil_3609 Exonuclease VII, large subunit
Mesil_0842 DNA polymerase III, alpha subunit
Mesil_0002 DNA polymerase III, beta subunit
Mesil_2524 DNA polymerase III, delta subunit
Mesil_2204 DNA polymerase III, epsilon subunit
Mesil_1583 Exonuclease RNase T and DNA polymerase III
Mesil_0389 DNA polymerase III, subunits gamma and tau
Mesil_0828 single-strand binding protein
Mesil_2840 single-strand binding protein
Mesil_3562 single-strand binding protein/Primosomal replication protein n
Mesil_3649 D12 class N6 adenine-specific DNA methyltransferase
Mesil_1191 Helix-hairpin-helix DNA-binding class 1
Mesil_3656 AAA ATPase
Mesil_0858 recA protein
Mesil_1706 Holliday junction DNA helicase RuvA
Mesil_2576 Holliday junction DNA helicase RuvB
Mesil_1666 crossover junction endodeoxyribonuclease RuvC
Mesil_3595 endodeoxyribonuclease RusA
Mesil_0035 primosomal protein N'
Mesil_1882 SMC domain protein
Mesil_1881 nuclease SbcCD, D subunit
Mesil_2176 DNA repair protein RadA
Mesil_0053 DNA replication and repair protein RecF
Mesil_1459 ATP-dependent DNA helicase RecG
Mesil_1721 DNA repair protein RecO
Mesil_1378 recombination protein RecR
Mesil_1325 DNA repair protein RecN
Mesil_1403 UvrD/REP helicase
Mesil_0708 CRISPR-associated protein Cas1
Mesil_3506 hypothetical protein
Mesil_1236 CRISPR-associated protein Cas1
Mesil_3371 hypothetical protein
Mesil_2474 DNA gyrase, A subunit
Mesil_0335 DNA gyrase, B subunit
Mesil_2658 DNA topoisomerase I
Mesil_0431 histone family protein DNA-binding protein
Mesil_3363 hypothetical protein
Mesil_0324 DNA-directed DNA polymerase
Mesil_1183 Peptidase S24/S26A/S26B, conserved region
Mesil_2836 Peptidase S24/S26A/S26B, conserved region
Mesil_1743 putative phage repressor
Mesil_1693 hypothetical protein
Mesil_1131 PHP domain protein
Mesil_1948 PHP domain protein
Mesil_2029 NUDIX hydrolase
Mesil_1317 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
Mesil_3233 hypothetical protein
Mesil_3415 NrdI protein
Mesil_3232 hypothetical protein
Mesil_3416 hypothetical protein
Mesil_0126 phosphoesterase RecJ domain protein
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K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K15342 cas1; CRISP-associated protein Cas1
K15342 cas1; CRISP-associated protein Cas1
K15342 cas1; CRISP-associated protein Cas1
K15342 cas1; CRISP-associated protein Cas1
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K02347 polX; DNA polymerase (family X)
K02347 polX; DNA polymerase (family X)
K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:msv03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Allomeiothermus silvanus