| |
KO |
 09100 Metabolism
|
|
|
 09120 Genetic Information Processing
|
|
|
09121 Transcription
|
|
|
09122 Translation
|
|
|
09123 Folding, sorting and degradation
|
|
|
09124 Replication and repair
|
03030 DNA replication [PATH:nda03030]
|
03410 Base excision repair [PATH:nda03410]
|
 Ndas_5316 endonuclease III
Ndas_1403 uracil-DNA glycosylase
Ndas_4995 HhH-GPD family protein
Ndas_0213 formamidopyrimidine-DNA glycosylase
Ndas_3660 DNA-(apurinic or apyrimidinic site) lyase
Ndas_0057 transcriptional regulator, AraC family
Ndas_4683 DNA-3-methyladenine glycosylase I
Ndas_1812 Uracil-DNA glycosylase superfamily
Ndas_4159 exodeoxyribonuclease III Xth
Ndas_2193 exodeoxyribonuclease III Xth
Ndas_2908 apurinic endonuclease Apn1
Ndas_0160 DNA ligase, NAD-dependent
|
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
|
03420 Nucleotide excision repair [PATH:nda03420]
|
03430 Mismatch repair [PATH:nda03430]
|
03440 Homologous recombination [PATH:nda03440]
|
03450 Non-homologous end-joining [PATH:nda03450]
|
03460 Fanconi anemia pathway
|
|
|
09126 Chromosome
|
|
|
09125 Information processing in viruses
|
|
|
09130 Environmental Information Processing
|
|
|
09140 Cellular Processes
|
|
|
09150 Organismal Systems
|
|
|
09160 Human Diseases
|
|
|
09180 Brite Hierarchies
|
|
|
09181 Protein families: metabolism
|
|
|
09182 Protein families: genetic information processing
|
03000 Transcription factors [BR:nda03000]
|
03021 Transcription machinery [BR:nda03021]
|
03019 Messenger RNA biogenesis [BR:nda03019]
|
03041 Spliceosome
|
03011 Ribosome [BR:nda03011]
|
03009 Ribosome biogenesis [BR:nda03009]
|
03016 Transfer RNA biogenesis [BR:nda03016]
|
03012 Translation factors [BR:nda03012]
|
03110 Chaperones and folding catalysts [BR:nda03110]
|
04131 Membrane trafficking [BR:nda04131]
|
04121 Ubiquitin system [BR:nda04121]
|
03051 Proteasome [BR:nda03051]
|
03032 DNA replication proteins [BR:nda03032]
|
03036 Chromosome and associated proteins [BR:nda03036]
|
03400 DNA repair and recombination proteins [BR:nda03400]
|
Ndas_0056 methylated-DNA/protein-cysteinemethyltransferase
Ndas_4333 Deoxyribodipyrimidine photo-lyase
Ndas_1403 uracil-DNA glycosylase
Ndas_4995 HhH-GPD family protein
Ndas_5316 endonuclease III
Ndas_4190 helicase domain protein
Ndas_4031 NUDIX hydrolase
Ndas_3838 NUDIX hydrolase
Ndas_0836 NUDIX hydrolase
Ndas_3038 NUDIX hydrolase
Ndas_5298 NUDIX hydrolase
Ndas_0589 NUDIX hydrolase
Ndas_2666 NUDIX hydrolase
Ndas_4195 NUDIX hydrolase
Ndas_2880 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
Ndas_2539 2OG-Fe(II) oxygenase
Ndas_1812 Uracil-DNA glycosylase superfamily
Ndas_0057 transcriptional regulator, AraC family
Ndas_4683 DNA-3-methyladenine glycosylase I
Ndas_0213 formamidopyrimidine-DNA glycosylase
Ndas_3660 DNA-(apurinic or apyrimidinic site) lyase
Ndas_4159 exodeoxyribonuclease III Xth
Ndas_2193 exodeoxyribonuclease III Xth
Ndas_2908 apurinic endonuclease Apn1
Ndas_0284 Deoxyribonuclease V
Ndas_0160 DNA ligase, NAD-dependent
Ndas_3018 excinuclease ABC, A subunit
Ndas_1887 excinuclease ABC, A subunit
Ndas_0965 excinuclease ABC, B subunit
Ndas_3014 excinuclease ABC, C subunit
Ndas_3807 UvrD/REP helicase
Ndas_3821 UvrD/REP helicase
Ndas_5235 ATP-dependent DNA helicase PcrA
Ndas_5116 DNA-directed RNA polymerase, beta subunit
Ndas_5152 DNA-directed RNA polymerase, alpha subunit
Ndas_3096 DNA-directed RNA polymerase, omega subunit
Ndas_0064 transcription-repair coupling factor
Ndas_0127 exodeoxyribonuclease VII, large subunit
Ndas_0128 exodeoxyribonuclease VII, small subunit
Ndas_3200 DNA polymerase III, alpha subunit
Ndas_0002 DNA polymerase III, beta subunit
Ndas_5295 DNA polymerase III, beta subunit
Ndas_0686 DNA polymerase III, delta subunit
Ndas_4955 DNA-directed DNA polymerase
Ndas_3141 DNA polymerase III, epsilon subunit
Ndas_4959 Exonuclease RNase T and DNA polymerase III
Ndas_2129 Exonuclease RNase T and DNA polymerase III
Ndas_0436 Exonuclease RNase T and DNA polymerase III
Ndas_0314 Exonuclease RNase T and DNA polymerase III
Ndas_4819 DNA polymerase III, subunits gamma and tau
Ndas_4843 single-strand binding protein
Ndas_3035 single-strand binding protein/Primosomal replication protein n
Ndas_3839 helicase, RecD/TraA family
Ndas_0666 recA protein
Ndas_0838 Holliday junction DNA helicase RuvA
Ndas_0839 Holliday junction DNA helicase RuvB
Ndas_0837 crossover junction endodeoxyribonuclease RuvC
Ndas_0853 Primosomal protein N' (replication factor Y) - superfamily II helicase
Ndas_0627 exonuclease
Ndas_0628 nuclease SbcCD, D subunit
Ndas_4999 DNA repair protein RadA
Ndas_0004 DNA replication and repair protein RecF
Ndas_0207 DEAD/DEAH box helicase domain protein
Ndas_0729 DNA repair protein RecO
Ndas_4814 recombination protein RecR
Ndas_3025 DNA repair protein RecN
Ndas_1286 CRISPR-associated protein Cas1
Ndas_2246 Ku protein
Ndas_0258 DNA polymerase LigD, polymerase domain protein
Ndas_3303 DNA topoisomerase (ATP-hydrolyzing)
Ndas_0007 DNA gyrase, A subunit
Ndas_3307 DNA topoisomerase (ATP-hydrolyzing)
Ndas_0006 DNA gyrase, B subunit
Ndas_4953 DNA topoisomerase I
Ndas_4311 DNA topoisomerase
Ndas_0187 histone family protein DNA-binding protein
Ndas_3301 ATP-dependent DNA helicase, RecQ family
Ndas_0882 DNA-directed DNA polymerase
Ndas_3328 transcriptional repressor, LexA family
Ndas_0667 regulatory protein RecX
Ndas_3345 DEAD/DEAH box helicase domain protein
Ndas_0664 DEAD/H associated domain protein
Ndas_5221 NUDIX hydrolase
Ndas_0970 NUDIX hydrolase
Ndas_3326 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
Ndas_4610 ribonucleoside-diphosphate reductase, alpha subunit
Ndas_4192 ribonucleotide-diphosphate reductase subunit beta
Ndas_4609 Ribonucleoside-diphosphate reductase
|
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K15342 cas1; CRISP-associated protein Cas1
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
|
03029 Mitochondrial biogenesis [BR:nda03029]
|
|
|
09183 Protein families: signaling and cellular processes
|
|
|
09185 Viral protein families
|
|
|
09184 RNA family
|
|
|
09190 Not Included in Pathway or Brite
|
KEGG Orthology (KO) - Nocardiopsis dassonvillei