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09100 Metabolism
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09120 Genetic Information Processing
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:raf03000]
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03021 Transcription machinery [BR:raf03021]
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03019 Messenger RNA biogenesis [BR:raf03019]
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03041 Spliceosome
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03011 Ribosome [BR:raf03011]
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03009 Ribosome biogenesis [BR:raf03009]
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RAF_ORF0146 rnc; Ribonuclease III
RAF_ORF0147 era; GTP-binding protein Era
RAF_ORF1195 obg; GTP-binding protein
RAF_ORF1158 dksA; DnaK suppressor-like protein
RAF_ORF0745 nusA; N utilization substance protein A, transcription termination factor NusA
RAF_ORF0195 nusB; N utilization substance protein B
RAF_ORF0165 nusG; Transcription antitermination protein NusG
RAF_ORF0928 ksgA; Dimethyladenosine transferase
RAF_ORF0738 N6-adenine-specific methylase
RAF_ORF0201 Unknown
RAF_ORF0080 gidB; Putative S-adenosylmethionine-dependent methyltransferase GidB
RAF_ORF0780 mraW; S-adenosyl-methyltransferase MraW
RAF_ORF1053 Putative methyltransferase
RAF_ORF0749 tlyA; Hemolysin A
RAF_ORF0915 tRNA/rRNA methyltransferase
RAF_ORF0196 rrmJ; Ribosomal RNA large subunit methyltransferase J
RAF_ORF0736 rluA2; Ribosomal large subunit pseudouridine synthase
RAF_ORF0320 rluA1; Ribosomal large subunit pseudouridine synthase
RAF_ORF1198 Ribosomal large subunit pseudouridine synthases RluD subfamily protein
RAF_ORF0440 rimM; 16S rRNA processing protein RimM
RAF_ORF0318 rne; Ribonuclease E
RAF_ORF0423 Putative endonuclease involved in recombination
RAF_ORF0925 rhlE; ATP-dependent RNA helicase RhlE
RAF_ORF0936 GTP-binding protein
RAF_ORF1202 Sua5/YciO/YrdC/YwlC family putative translation factor protein
RAF_ORF0567 rbfA; Ribosome-binding factor A
RAF_ORF0746 Unknown
RAF_ORF1143 Iojap-related protein
RAF_ORF1040 Putative metal-dependent hydrolase
RAF_ORF0841 ychF; GTP-binding protein YchF
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K03685 rnc; ribonuclease III [EC:3.1.26.3]
K03595 era; GTPase
K03979 obgE; GTPase [EC:3.6.5.-]
K06204 dksA; RNA polymerase-binding transcription factor
K02600 nusA; transcription termination/antitermination protein NusA
K03625 nusB; transcription antitermination protein NusB
K02601 nusG; transcription termination/antitermination protein NusG
K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
K02860 rimM; 16S rRNA processing protein RimM
K08300 rne; ribonuclease E [EC:3.1.26.12]
K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
K05592 deaD; ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
K03977 engA; GTPase
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
K02834 rbfA; ribosome-binding factor A
K09748 rimP; ribosome maturation factor RimP
K09710 ybeB; ribosome-associated protein
K07042 ybeY; probable rRNA maturation factor
K06942 ychF; ribosome-binding ATPase
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03016 Transfer RNA biogenesis [BR:raf03016]
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03012 Translation factors [BR:raf03012]
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03110 Chaperones and folding catalysts [BR:raf03110]
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04131 Membrane trafficking [BR:raf04131]
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04121 Ubiquitin system [BR:raf04121]
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03051 Proteasome [BR:raf03051]
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03032 DNA replication proteins [BR:raf03032]
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03036 Chromosome and associated proteins [BR:raf03036]
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03400 DNA repair and recombination proteins [BR:raf03400]
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03029 Mitochondrial biogenesis [BR:raf03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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