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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:rmi03030]
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03410 Base excision repair [PATH:rmi03410]
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03420 Nucleotide excision repair [PATH:rmi03420]
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03430 Mismatch repair [PATH:rmi03430]
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03440 Homologous recombination [PATH:rmi03440]
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 RMB_04505 single-stranded-DNA-specific exonuclease RecJ
RMB_06930 single-stranded DNA-binding protein
RMB_00375 recF; recombination protein F
RMB_03885 recO; DNA repair protein RecO
RMB_04980 recR; recombination protein RecR
RMB_02000 recA; recombinase A
RMB_05370 ruvA; Holliday junction DNA helicase RuvA
RMB_05350 ruvB; Holliday junction DNA helicase RuvB
RMB_00935 ruvC; Holliday junction resolvase
RMB_03465 ATP-dependent DNA helicase RecG
RMB_01870 dnaE; DNA polymerase III subunit alpha
RMB_05115 DNA polymerase III subunit beta
RMB_01370 holA; DNA polymerase III subunit delta
RMB_01210 DNA polymerase III subunit delta'
RMB_02325 DNA polymerase III subunit epsilon
RMB_07185 DNA polymerase III subunit chi
RMB_03945 primosome assembly protein PriA
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:rmi03000]
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03021 Transcription machinery [BR:rmi03021]
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03019 Messenger RNA biogenesis [BR:rmi03019]
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03041 Spliceosome
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03011 Ribosome [BR:rmi03011]
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03009 Ribosome biogenesis [BR:rmi03009]
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03016 Transfer RNA biogenesis [BR:rmi03016]
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03012 Translation factors [BR:rmi03012]
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03110 Chaperones and folding catalysts [BR:rmi03110]
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04131 Membrane trafficking [BR:rmi04131]
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04121 Ubiquitin system
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03051 Proteasome [BR:rmi03051]
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03032 DNA replication proteins [BR:rmi03032]
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03036 Chromosome and associated proteins [BR:rmi03036]
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03400 DNA repair and recombination proteins [BR:rmi03400]
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RMB_03625 Methylated-DNA--protein-cysteine methyltransferase
RMB_05640 3-methyladenine DNA glycosylase
RMB_02155 endonuclease III
RMB_05400 ADP-ribose pyrophosphatase MutT
RMB_05285 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
RMB_07000 uracil-DNA glycosylase
RMB_02740 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
RMB_06415 exodeoxyribonuclease III
RMB_02795 exodeoxyribonuclease III
RMB_04505 single-stranded-DNA-specific exonuclease RecJ
RMB_02430 ligA; NAD-dependent DNA ligase LigA
RMB_06925 uvrA; excinuclease ABC subunit A
RMB_01470 excinuclease ABC subunit B
RMB_03640 uvrC; excinuclease ABC subunit C
RMB_04905 DNA helicase II
RMB_01040 rpoB; DNA-directed RNA polymerase subunit beta
RMB_01045 DNA-directed RNA polymerase subunit beta'
RMB_03040 DNA-directed RNA polymerase subunit alpha
RMB_03560 rpoZ; DNA-directed RNA polymerase subunit omega
RMB_03400 transcription-repair coupling factor
RMB_06080 DNA mismatch repair protein MutS
RMB_07105 mutL; DNA mismatch repair protein
RMB_02815 xseA; exodeoxyribonuclease VII large subunit
RMB_05670 exodeoxyribonuclease VII small subunit
RMB_01870 dnaE; DNA polymerase III subunit alpha
RMB_05115 DNA polymerase III subunit beta
RMB_07185 DNA polymerase III subunit chi
RMB_01370 holA; DNA polymerase III subunit delta
RMB_01210 DNA polymerase III subunit delta'
RMB_02325 DNA polymerase III subunit epsilon
RMB_06930 single-stranded DNA-binding protein
RMB_02000 recA; recombinase A
RMB_05370 ruvA; Holliday junction DNA helicase RuvA
RMB_05350 ruvB; Holliday junction DNA helicase RuvB
RMB_00935 ruvC; Holliday junction resolvase
RMB_03945 primosome assembly protein PriA
RMB_03895 DNA repair protein RadA
RMB_00375 recF; recombination protein F
RMB_03465 ATP-dependent DNA helicase RecG
RMB_03885 recO; DNA repair protein RecO
RMB_04980 recR; recombination protein RecR
RMB_01325 DNA repair protein RecN
RMB_02315 ATP-dependent helicase
RMB_05260 endonuclease
RMB_01485 DNA gyrase subunit A
RMB_03550 gyrB; DNA gyrase subunit B
RMB_05830 DNA topoisomerase I
RMB_01205 DNA-binding protein HU
RMB_02465 Integration host factor alpha-subunit
RMB_04485 integration host factor beta-subunit
RMB_04785 ribonucleotide-diphosphate reductase subunit alpha
RMB_04760 nrdF; ribonucleotide-diphosphate reductase subunit beta
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:rmi03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Rickettsia massiliae AZT80