Transcription Factors - Rattus norvegicus (rat)

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     KO 
 Eukaryotic type

   Basic leucine zipper (bZIP)

   Basic helix-loop-helix (bHLH)

   Basic helix-loop-helix/leucine zipper (bHLH-ZIP)

   Other basic domains

   Zinc finger

   Helix-turn-helix

     Homeo domain only, AbdB

     Homeo domain only, Antp

     Homeo domain only, Cad

     Homeo domain only, Cut

     Homeo domain only, Dll

     Homeo domain only, Ems

     Homeo domain only, En

     Homeo domain only, Eve

     Homeo domain only, Prd

     Homeo domain only, HD-ZIP

     Homeo domain only, H2.0

     Homeo domain only, HNF1

     Homeo domain only, Msh

     Homeo domain only, NK-2

     Homeo domain only, XANF

     Homeo domain only, PBC

     Homeo domain only, MEIS

     Homeo domain only, SIM

     Homeo domain only, TGIF

     Homeo domain only, not assigned

     POU domain factors

     Homeo domain with LIM region

     Homeo domain with LIM region, LIM-only transcription (co-)factors

     Homeo domain plus zinc finger motifs

     Homeo domain with Prospero motifs

     Paired box plus homeo domain

     Paired box domain only

     Fork head/winged helix developmental regulators

       25099 Foxa2; hepatocyte nuclear factor 3-beta
       171356 Foxc2; forkhead box protein C2
       364706 Foxc1; forkhead box protein C1
       24370 Foxg1; forkhead box protein G1
       301676 Foxn2; forkhead box protein N2
       314374 Foxn3; forkhead box protein N3
       288736 Foxn4; forkhead box protein N4
       287469 Foxn1; forkhead box protein N1

K08035 FOXA2; forkhead box protein A2, hepatocyte nuclear factor 3-beta 
K09396 FOXC; forkhead box protein C 
K09396 FOXC; forkhead box protein C 
K09385 FOXG; forkhead box protein G 
K09407 FOXN; forkhead box protein N 
K09407 FOXN; forkhead box protein N 
K09407 FOXN; forkhead box protein N 
K09407 FOXN; forkhead box protein N 

     Fork head/winged helix tissue-specific regulators

     Fork head/winged helix cell cycle-controlling factors, E2F

     Fork head/winged helix cell cycle-controlling factors, DP

     Fork head/winged helix other regulators

     Heat shock factors

     Tryptophan clusters Myb, Myb-factors

     Tryptophan clusters Myb, Myb-like factors

     Tryptophan clusters Ets-type

     Tryptophan clusters interferon-regulating factors

     TEA domain

   beta-Scaffold factors with minor groove contacts

   Other transcription factors

 





 Prokaryotic type













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Last updated: February 18, 2021
Classification taken and modified from TRANSFAC 7.0