Ribosome Biogenesis - Rattus norvegicus (rat)

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     KO
 Eukaryotic type
   Sno RNPs
   90S particles
   Pre-40S particles
   Pre-60S particles
     Helicases
     GTPases
     RNases
     Kinases
     Export and cytoplasmic maturation factors
     5-FMC complex
     Other pre-60S particles
       294799 Brix1; ribosome biogenesis protein BRX1 homolog
       298546 Zfp593; zinc finger protein 593
       293738 Ccdc86; coiled-coil domain-containing protein 86
       114021 Ebna1bp2; probable rRNA-processing protein EBP2
       300050 Bop1; ribosome biogenesis protein BOP1
       289883 Tmed5; transmembrane emp24 domain-containing protein 5 precursor
       361232 Pak1ip1; p21-activated protein kinase-interacting protein 1
       306526 Mak16; protein MAK16 homolog
       362686 Cebpz; CCAAT/enhancer-binding protein zeta
       362498 Mdn1; midasin isoform X1
       192180 Nip7; 60S ribosome subunit biogenesis protein NIP7 homolog
       313777 Noc2l; nucleolar complex protein 2 homolog precursor
       361753 Noc3l; nucleolar complex protein 3 homolog
       314969 Nop2; probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
       312182 Rbm28; RNA-binding protein 28
       361221 Nol8; nucleolar protein 8
       307956 Rbm34; RNA-binding protein 34
       246042 Nifk; MKI67 FHA domain-interacting nucleolar phosphoprotein
       292624 Nop53; glioma tumor suppressor candidate region gene 2 protein
       690229 Wdr74; WD repeat-containing protein 74
       171456 Nsa2; ribosome biogenesis protein NSA2 homolog
       289740 Pes1; pescadillo homolog
       499339 Pum3; pumilio homolog 3
       362856 Pwp1; periodic tryptophan protein 1 homolog
       361799 Dxo; decapping and exoribonuclease protein
       314300 Riox1; ribosomal oxygenase 1
       266670 Riox2; ribosomal oxygenase 2
       289323 Nvl; nuclear valosin-containing protein-like
       499725 Rpf1; ribosome production factor 1
       294436 Rpf2; ribosome production factor 2 homolog
       308592 Grwd1; glutamate-rich WD repeat-containing protein 1
       309674 Rrp1; ribosomal RNA processing protein 1 homolog A
       309673 Rrp1b; ribosomal RNA processing protein 1 homolog B isoform X2
       308911 Rrp8; ribosomal RNA-processing protein 8
       679127 Rrp12; RRP12-like protein
       362955 Nol12; nucleolar protein 12
       297784 Rrs1; ribosome biogenesis regulatory protein homolog
       303372 Nle1; notchless protein homolog 1
       289504 Sdad1; protein SDA1 homolog
       303608 Ftsj3; pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3
       298699 Ppan; suppressor of SWI4 1 homolog
       290686 Tma16; translation machinery-associated protein 16
       304104 Urb1; nucleolar pre-ribosomal-associated protein 1
       292087 Urb2; unhealthy ribosome biogenesis protein 2 homolog
       363237 Wdr12; ribosome biogenesis protein WDR12
       364430 Nufip1; nuclear fragile X mental retardation-interacting protein 1
       497975 Znhit3; zinc finger HIT domain-containing protein 3 isoform X1
K14820 BRX1; ribosome biogenesis protein BRX1 
K14821 BUD20; bud site selection protein 20 
K14822 CGR1; rRNA-processing protein CGR1 
K14823 EBP2; rRNA-processing protein EBP2 
K14824 ERB1; ribosome biogenesis protein ERB1 
K14825 TMED5; p24 family protein gamma-2 
K14830 MAK11; protein MAK11 
K14831 MAK16; protein MAK16 
K14832 MAK21; ribosome biogenesis protein MAK21 
K14572 MDN1; midasin 
K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 
K14833 NOC2; nucleolar complex protein 2 
K14834 NOC3; nucleolar complex protein 3 
K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310] 
K14573 NOP4; nucleolar protein 4 
K14836 NOP8; nucleolar protein 8 
K14837 NOP12; nucleolar protein 12 
K14838 NOP15; nucleolar protein 15 
K14840 NOP53; nucleolar protein 53 
K14841 NSA1; ribosome biogenesis protein NSA1 
K14842 NSA2; ribosome biogenesis protein NSA2 
K14843 PES1; pescadillo 
K14844 PUF6; pumilio homology domain family member 6 
K14791 PWP1; periodic tryptophan protein 1 
K14845 RAI1; RAT1-interacting protein 
K16914 RIOX1; bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 [EC:1.14.11.- 1.14.11.27] 
K21760 RIOX2; bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA [EC:1.14.11.-] 
K14571 RIX7; ribosome biogenesis ATPase 
K14846 RPF1; ribosome production factor 1 
K14847 RPF2; ribosome production factor 2 
K14848 RRB1; ribosome assembly protein RRB1 
K14849 RRP1; ribosomal RNA-processing protein 1 
K14849 RRP1; ribosomal RNA-processing protein 1 
K14850 RRP8; ribosomal RNA-processing protein 8 [EC:2.1.1.287] 
K14794 RRP12; ribosomal RNA-processing protein 12 
K14851 RRP17; ribosomal RNA-processing protein 17 
K14852 RRS1; regulator of ribosome biosynthesis 
K14855 RSA4; ribosome assembly protein 4 
K14856 SDA1; protein SDA1 
K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-] 
K14859 SSF1_2; ribosome biogenesis protein SSF1/2 
K14860 TMA16; translation machinery-associated protein 16 
K14861 URB1; nucleolar pre-ribosomal-associated protein 1 
K14862 URB2; nucleolar pre-ribosomal-associated protein 2 
K14863 WDR12; ribosome biogenesis protein 
K23308 NUFIP1; nuclear fragile X mental retardation-interacting protein 1 
K23309 ZNHIT3; zinc finger HIT domain-containing protein 3 
   Other ribosome biogenesis factors
 
 Prokaryotic type
 
 Related small nucleolar RNAs

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Last updated: October 8, 2020