Chromosome and Associated Proteins - Rattus norvegicus (rat)

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     KO
 Eukaryotic type
   Sister chromatid cohesion proteins
   Meiosis-specific proteins
   Nucleosome assembly factors
   Histone modification proteins
     HATs (histone acetyltransferases)
     HAT complexes
     HDACs (histone deacetylases)
     HDAC complexes
       Sin3A-HDAC complex
         297893 Hdac1; histone deacetylase 1
         84576 Hdac1l; histone deacetylase 1-like
         84577 Hdac2; histone deacetylase 2
         363067 Sin3a; paired amphipathic helix protein Sin3a
         313048 Rbbp4; histone-binding protein RBBP4
         310511 Rbbp4l1; histone-binding protein RBBP4
         83712 Rbbp7; histone-binding protein RBBP7
         360819 Suds3; sin3 histone deacetylase corepressor complex component SDS3 isoform X2
         680122 Sap30; histone deacetylase complex subunit SAP30
         360531 Sap30l; histone deacetylase complex subunit SAP30L
         290284 Sap18; histone deacetylase complex subunit SAP18
         307527 Sap130; histone deacetylase complex subunit SAP130
         288559 Sap25; histone deacetylase complex subunit SAP25
         84481 Arid4b; AT-rich interactive domain-containing protein 4B isoform 2
         293668 Brms1; breast cancer metastasis-suppressor 1 homolog
         299053 Brms1l; breast cancer metastasis-suppressor 1-like protein 
         306626 Ing1; inhibitor of growth protein 1
         290744 Ing2; inhibitor of growth protein 2
         686611 Sinhcaf; SIN3-HDAC complex-associated factor
K06067 HDAC1_2; histone deacetylase 1/2 [EC:3.5.1.98] 
K06067 HDAC1_2; histone deacetylase 1/2 [EC:3.5.1.98] 
K06067 HDAC1_2; histone deacetylase 1/2 [EC:3.5.1.98] 
K11644 SIN3A; paired amphipathic helix protein Sin3a 
K10752 RBBP4; histone-binding protein RBBP4 
K10752 RBBP4; histone-binding protein RBBP4 
K11659 RBBP7; histone-binding protein RBBP7 
K19201 SUDS3; Sin3 histone deacetylase corepressor complex component SDS3 
K19202 SAP30; histone deacetylase complex subunit SAP30 
K19202 SAP30; histone deacetylase complex subunit SAP30 
K14324 SAP18; histone deacetylase complex subunit SAP18 
K19192 SAP130; histone deacetylase complex subunit SAP130 
K19193 SAP25; histone deacetylase complex subunit SAP25 
K19195 ARID4B; AT-rich interactive domain-containing protein 4B 
K19196 BRMS1; breast cancer metastasis-suppressor 1 and related proteins 
 
K19197 ING1; inhibitor of growth protein 1 
K19198 ING2; inhibitor of growth protein 2 
K26090 SINHCAF; SIN3-HDAC complex-associated factor 
       BRAF-HDAC complex
       REST complex
       SHIP complex
       MiDAC complex
       SMART complex
       Other HDAC associated proteins
     HMTs (histone methyltransferases)
     HMT complexes
     Histone demethylases
     Polycomb repressive complex (PRC) and associated proteins
       Canonical PRC1 (PRC1.2/1.4)
       Noncanonical PRC1 (PRC1.1)
       Noncanonical PRC1 (PRC1.3/1.5)
       Noncanonical PRC1 (PRC1.6)
       PRC2.1
         303547 Ezh1; histone-lysine N-methyltransferase EZH1
         312299 Ezh2; histone-lysine N-methyltransferase EZH2
         293104 Eed; polycomb protein EED
         688041 Suz12; polycomb protein SUZ12 isoform X1
         313048 Rbbp4; histone-binding protein RBBP4
         310511 Rbbp4l1; histone-binding protein RBBP4
         83712 Rbbp7; histone-binding protein RBBP7
         294287 Phf1; PHD finger protein 1
         360905 Mtf2; metal-response element-binding transcription factor 2
         296653 Phf19; PHD finger protein 19
         691153 Epop; elongin BC and Polycomb repressive complex 2-associated protein
         365462 Lcor; ligand-dependent corepressor isoform 1
K17451 EZH1; [histone H3]-lysine27 N-trimethyltransferase EZH1 [EC:2.1.1.356] 
K11430 EZH2; [histone H3]-lysine27 N-trimethyltransferase EZH2 [EC:2.1.1.356] 
K11462 EED; polycomb protein EED 
K11463 SUZ12; polycomb protein SUZ12 
K10752 RBBP4; histone-binding protein RBBP4 
K10752 RBBP4; histone-binding protein RBBP4 
K11659 RBBP7; histone-binding protein RBBP7 
K11467 PHF1; PHD finger protein 1 
K11485 MTF2; metal regulatory transcription factor 2 
K11486 PHF19; PHD finger protein 19 
K26259 EPOP; elongin BC and Polycomb repressive complex 2-associated protein 
K26260 LCOR; ligand-dependent corepressor 
       PRC2.2
         303547 Ezh1; histone-lysine N-methyltransferase EZH1
         312299 Ezh2; histone-lysine N-methyltransferase EZH2
         293104 Eed; polycomb protein EED
         688041 Suz12; polycomb protein SUZ12 isoform X1
         313048 Rbbp4; histone-binding protein RBBP4
         310511 Rbbp4l1; histone-binding protein RBBP4
         83712 Rbbp7; histone-binding protein RBBP7
         681740 Jarid2; jumonji and AT-rich interaction domain containing 2
K17451 EZH1; [histone H3]-lysine27 N-trimethyltransferase EZH1 [EC:2.1.1.356] 
K11430 EZH2; [histone H3]-lysine27 N-trimethyltransferase EZH2 [EC:2.1.1.356] 
K11462 EED; polycomb protein EED 
K11463 SUZ12; polycomb protein SUZ12 
K10752 RBBP4; histone-binding protein RBBP4 
K10752 RBBP4; histone-binding protein RBBP4 
K11659 RBBP7; histone-binding protein RBBP7 
K11478 JARID2; protein Jumonji 
       PR-DUB complex
       Other PRC associated proteins
     Sir proteins
     Other histone modification proteins
   Chromosome condensation proteins
   Centromeric chromatin formation proteins
   Heterochromatin formation proteins
   Gene silencing
   Centrosome formation proteins
   Sister chromatid separation proteins
   Chromatin remodeling factors
     BAF complex
     PBAF complex
     GBAF(ncBAF) complex
     CHRAC complex
     RSF complex
     WICH complex
     B-WICH complex
     NORC complex
     BRF complex
     NuRD complex
       297893 Hdac1; histone deacetylase 1
       84576 Hdac1l; histone deacetylase 1-like
       84577 Hdac2; histone deacetylase 2
       303241 Chd3; chromodomain-helicase-DNA-binding protein 3
       117535 Chd4; chromodomain-helicase-DNA-binding protein 4
       313048 Rbbp4; histone-binding protein RBBP4
       310511 Rbbp4l1; histone-binding protein RBBP4
       83712 Rbbp7; histone-binding protein RBBP7
       361724 Mta2; metastasis-associated protein MTA2
       64520 Mta1; metastasis-associated protein MTA1
       100362346 Mta3; metastasis-associated protein MTA3
       362834 Mbd3; methyl-CpG-binding domain protein 3
       290669 Gatad2a; transcriptional repressor p66-alpha
       310614 Gatad2b; transcriptional repressor p66-beta
       100359714 Phf6; PHD finger protein 6
       360804 Cdk2ap1; cyclin-dependent kinase 2-associated protein 1 isoform 1
       688405 Cdk2ap2; cyclin-dependent kinase 2-associated protein 2
K06067 HDAC1_2; histone deacetylase 1/2 [EC:3.5.1.98] 
K06067 HDAC1_2; histone deacetylase 1/2 [EC:3.5.1.98] 
K06067 HDAC1_2; histone deacetylase 1/2 [EC:3.5.1.98] 
K11642 CHD3; chromodomain-helicase-DNA-binding protein 3 [EC:5.6.2.-] 
K11643 CHD4; chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-] 
K10752 RBBP4; histone-binding protein RBBP4 
K10752 RBBP4; histone-binding protein RBBP4 
K11659 RBBP7; histone-binding protein RBBP7 
K11660 MTA; metastasis-associated protein MTA 
K11660 MTA; metastasis-associated protein MTA 
K11660 MTA; metastasis-associated protein MTA 
K11591 MBD3; methyl-CpG-binding domain protein 3 
K23194 GATAD2; transcriptional repressor p66 
K23194 GATAD2; transcriptional repressor p66 
K23310 PHF6; PHD finger protein 6 
K26454 CDK2AP1; cyclin-dependent kinase 2-associated protein 1 
K26455 CDK2AP2; cyclin-dependent kinase 2-associated protein 2 
     NuRF complex
       317575 Smarca1; probable global transcription activator SNF2L1
       303617 Bptf; nucleosome-remodeling factor subunit BPTF isoform X1
       313048 Rbbp4; histone-binding protein RBBP4
       310511 Rbbp4l1; histone-binding protein RBBP4
       83712 Rbbp7; histone-binding protein RBBP7
       287452 C10h17orf49; chromatin complexes subunit BAP18 isoform 1
K11727 SMARCA1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1 [EC:5.6.2.-] 
K11728 BPTF; nucleosome-remodeling factor subunit BPTF 
K10752 RBBP4; histone-binding protein RBBP4 
K10752 RBBP4; histone-binding protein RBBP4 
K11659 RBBP7; histone-binding protein RBBP7 
K23406 BAP18; chromatin complexes subunit BAP18 
     NuRF complex (fruit fly)
     CERF complex
     SRCAP complex
     INO80 complex
     INO80 complex (yeast)
     RSC complex
     SWI/SNF complex
     SWR1 complex
     ASTRA complex
     Other chromatin remodeling factors
 
 Prokaryotic type

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Last updated: April 10, 2024