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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:saus03030]
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03410 Base excision repair [PATH:saus03410]
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03420 Nucleotide excision repair [PATH:saus03420]
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03430 Mismatch repair [PATH:saus03430]
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03440 Homologous recombination [PATH:saus03440]
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 SA40_1505 putative single-stranded-DNA-specific exonuclease
SA40_0324 ssb; putative single-strand DNA-binding protein
SA40_1854 putative single strand DNA-binding protein
SA40_0005 recF; DNA replication and repair protein RecF
SA40_1437 putative recombination protein O
SA40_0418 recR; putative recombination protein
SA40_1158 recA; recombinase A
SA40_1551 polA; DNA polymerase I
SA40_1511 ruvA; Holliday junction DNA helicase RuvA
SA40_1510 ruvB; Holliday junction DNA helicase
SA40_1963 ATP-dependent DNA helicase recG
SA40_1100 recG; ATP-dependent DNA helicase
SA40_1489 hypothetical protein
SA40_1563 dnaE; DNA polymerase III alpha subunit
SA40_1137 polC; DNA polymerase III PolC-type
SA40_0002 dnaN; DNA polymerase III, beta chain
SA40_0416 dnaX; DNA polymerase III, tau subunit
SA40_1457 hypothetical protein
SA40_0422 holB; putative DNA polymerase III, delta' subunit
SA40_1734 putative exonuclease
SA40_1085 priA; primosomal protein n'
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:saus03000]
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03021 Transcription machinery [BR:saus03021]
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03019 Messenger RNA biogenesis [BR:saus03019]
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03041 Spliceosome
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03011 Ribosome [BR:saus03011]
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03009 Ribosome biogenesis [BR:saus03009]
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03016 Transfer RNA biogenesis [BR:saus03016]
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03012 Translation factors [BR:saus03012]
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03110 Chaperones and folding catalysts [BR:saus03110]
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04131 Membrane trafficking [BR:saus04131]
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04121 Ubiquitin system [BR:saus04121]
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03051 Proteasome
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03032 DNA replication proteins [BR:saus03032]
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03036 Chromosome and associated proteins [BR:saus03036]
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03400 DNA repair and recombination proteins [BR:saus03400]
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SA40_2300 putative 6-O-methylguanine DNA methyltransferase
SA40_0631 putative DNA photolyase
SA40_0521 ung; putative uracil-DNA glycosylase
SA40_2089 putative 3-methylpurine glycosylase
SA40_1708 HhH-GPD superfamily base excision DNA repair protein
SA40_1327 putative endonuclease
SA40_2239 hydrolase, MutT/nudix family
SA40_1650 hypothetical protein
SA40_0883 hypothetical protein
SA40_1526 tag; DNA-3-methyladenine glycosylase I
SA40_1550 formamidopyrimidine-DNA glycosylase
SA40_1428 putative endonuclease
SA40_1505 putative single-stranded-DNA-specific exonuclease
SA40_1745 lig; DNA ligase
SA40_1551 polA; DNA polymerase I
SA40_0698 uvrA; excinuclease ABC subunit A
SA40_0697 uvrB; excinuclease ABC subunit B
SA40_1017 uvrC; putative excinuclease ABC subunit C
SA40_1746 pcrA; ATP-dependent DNA helicase
SA40_0482 rpoB; DNA-directed RNA polymerase beta chain protein
SA40_0483 rpoC; DNA-directed RNA polymerase beta' chain protein
SA40_1971 rpoA; DNA-directed RNA polymerase alpha chain
SA40_1887 rpoE; DNA-directed RNA polymerase delta subunit
SA40_1083 rpoZ; DNA-directed RNA polymerase subunit omega
SA40_0442 putative transcription-repair coupling factor
SA40_1168 mutS; DNA mismatch repair protein MutS
SA40_1015 MutS family DNA mismatch repair protein
SA40_1169 mutL; DNA mismatch repair protein MutL
SA40_1395 putative exodeoxyribonuclease VII large subunit
SA40_1394 putative exodeoxyribonuclease VII small subunit
SA40_1563 dnaE; DNA polymerase III alpha subunit
SA40_1137 polC; DNA polymerase III PolC-type
SA40_0002 dnaN; DNA polymerase III, beta chain
SA40_1457 hypothetical protein
SA40_0422 holB; putative DNA polymerase III, delta' subunit
SA40_1734 putative exonuclease
SA40_0416 dnaX; DNA polymerase III, tau subunit
SA40_0324 ssb; putative single-strand DNA-binding protein
SA40_1854 putative single strand DNA-binding protein
SA40_1489 hypothetical protein
SA40_1158 recA; recombinase A
SA40_1511 ruvA; Holliday junction DNA helicase RuvA
SA40_1510 ruvB; Holliday junction DNA helicase
SA40_1085 priA; primosomal protein n'
SA40_1225 putative exonuclease
SA40_1224 putative exonuclease
SA40_0465 radA; putative DNA repair protein
SA40_0005 recF; DNA replication and repair protein RecF
SA40_1963 ATP-dependent DNA helicase recG
SA40_1100 recG; ATP-dependent DNA helicase
SA40_1437 putative recombination protein O
SA40_0418 recR; putative recombination protein
SA40_1391 putative DNA repair protein
SA40_1324 recU; putative recombination protein U
SA40_0834 putative helicase
SA40_0833 hypothetical protein
SA40_0007 gyrA; DNA gyrase subunit A
SA40_0006 gyrB; DNA gyrase subunit B
SA40_1123 topA; DNA topoisomerase I
SA40_1346 hup; DNA-binding protein HU
SA40_1355 DEAD/DEAH box helicase family protein
SA40_0661 putative ATP-dependent DNA helicase
SA40_1735 ImpB/MucB/SamB family protein
SA40_1241 ImpB/MucB/SamB family protein
SA40_1218 dinR; LexA repressor
SA40_1713 putative regulatory protein
SA40_1014 DNA polymerase X family protein
SA40_1330 hypothetical protein
SA40_0671 ribonucleoside-diphosphate reductase, alpha subunit
SA40_0672 rir2; ribonucleoside-diphosphate reductase beta chain
SA40_1564 hypothetical protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03700 recU; recombination protein U
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K02347 polX; DNA polymerase (family X)
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:saus03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Staphylococcus aureus subsp. aureus SA40 (CA-MRSA)