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09100 Metabolism
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09120 Genetic Information Processing
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:sce03000]
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03021 Transcription machinery [BR:sce03021]
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03019 Messenger RNA biogenesis [BR:sce03019]
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03041 Spliceosome [BR:sce03041]
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03011 Ribosome [BR:sce03011]
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03009 Ribosome biogenesis [BR:sce03009]
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03016 Transfer RNA biogenesis [BR:sce03016]
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YNL221C POP1; ribonuclease P/MRP protein subunit POP1
YNL282W POP3; Pop3p
YBR257W POP4; RNase P/RNase MRP complex subunit
YAL033W POP5; RNA-binding protein POP5
YGR030C POP6; ribonuclease P/MRP protein subunit POP6
YBR167C POP7; ribonuclease P/MRP protein subunit POP7
YBL018C POP8; ribonuclease P
YHR062C RPP1; RNA-binding RNA processing protein RPP1
YIR015W RPR2; ribonuclease P protein subunit RPR2
YML091C RPM2; ribonuclease P
YKR079C TRZ1; tRNase Z
YPL123C RNY1; ribonuclease T2
YER168C CCA1; tRNA adenylyltransferase
YLR105C SEN2; tRNA splicing endonuclease subunit SEN2
YAR008W SEN34; tRNA splicing endonuclease subunit SEN34
YMR059W SEN15; Sen15p
YPL083C SEN54; tRNA splicing endonuclease subunit SEN54
YOL102C TPT1; tRNA 2'-phosphotransferase
YGR247W CPD1; 2',3'-cyclic-nucleotide 3'-phosphodiesterase
YJL087C TRL1; tRNA ligase
YLR293C GSP1; Ran GTPase GSP1
YOR185C GSP2; Ran GTPase GSP2
YKL205W LOS1; Ran GTPase-binding protein LOS1
YGR218W CRM1; exportin CRM1
YDR335W MSN5; karyopherin MSN5
YPR080W TEF1; translation elongation factor EF-1 alpha
YBR118W TEF2; translation elongation factor EF-1 alpha
YGR128C UTP8; Utp8p
YOR112W CEX1; Cex1p
YOR160W MTR10; Mtr10p
YOL033W MSE1; glutamate--tRNA ligase MSE1
YGL245W GUS1; glutamate--tRNA ligase GUS1
YER087W AIM10; putative proline--tRNA ligase AIM10
YHR020W proline--tRNA ligase
YPL040C ISM1; isoleucine--tRNA ligase ISM1
YBL076C ILS1; isoleucine--tRNA ligase ILS1
YPL160W CDC60; leucine--tRNA ligase CDC60
YLR382C NAM2; leucine--tRNA ligase NAM2
YGR264C MES1; methionine--tRNA ligase MES1
YGR171C MSM1; methionine--tRNA ligase MSM1
YOR168W GLN4; glutamine--tRNA ligase
YHR091C MSR1; arginine--tRNA ligase MSR1
YDR341C RRS1; arginine--tRNA ligase
YDR037W KRS1; lysine--tRNA ligase KRS1
YNL073W MSK1; lysine--tRNA ligase MSK1
YLL018C DPS1; aspartate--tRNA ligase DPS1
YPL104W MSD1; aspartate--tRNA ligase MSD1
YGL105W ARC1; Arc1p
YOR335C ALA1; alanine--tRNA ligase
YHR019C DED81; asparagine--tRNA ligase DED81
YCR024C SLM5; asparagine--tRNA ligase SLM5
YPR081C GRS2; putative glycine--tRNA ligase
YBR121C GRS1; glycine--tRNA ligase
YIL078W THS1; threonine--tRNA ligase THS1
YKL194C MST1; threonine--tRNA ligase MST1
YHR011W DIA4; putative serine--tRNA ligase DIA4
YDR023W SES1; serine--tRNA ligase SES1
YNL247W CRS1; cysteine--tRNA ligase
YGR094W VAS1; valine--tRNA ligase
YPR033C HTS1; histidine--tRNA ligase
YPR047W MSF1; phenylalanine--tRNA ligase
YFL022C FRS2; phenylalanine--tRNA ligase subunit alpha
YLR060W FRS1; phenylalanine--tRNA ligase subunit beta
YPL097W MSY1; tyrosine--tRNA ligase MSY1
YGR185C TYS1; tyrosine--tRNA ligase TYS1
YDR268W MSW1; tryptophan--tRNA ligase MSW1
YOL097C WRS1; tryptophan--tRNA ligase WRS1
YDL219W DTD1; D-tyrosyl-tRNA(Tyr) deacylase
YNL040W putative alanine--tRNA ligase
YGL243W TAD1; tRNA-specific adenosine deaminase
YJL035C TAD2; tRNA(adenine34) deaminase
YLR316C TAD3; Tad3p
YML080W DUS1; tRNA dihydrouridine synthase
YNR015W SMM1; tRNA-dihydrouridine(20) synthase (NAD(+))
YLR401C DUS3; tRNA dihydrouridine synthase DUS3
YLR405W DUS4; tRNA dihydrouridine synthase
YDR120C TRM1; tRNA (guanine26-N2)-dimethyltransferase
YKR056W TRM2; tRNA (uracil(54)-C(5))-methyltransferase
YDL112W TRM3; tRNA (guanosine(18)-2'-O)-methyltransferase
YBL024W NCL1; tRNA (cytosine-C5-)-methyltransferase
YHR070W TRM5; tRNA (guanine) methyltransferase
YJL125C GCD14; tRNA 1-methyladenosine methyltransferase subunit GCD14
YNL062C GCD10; tRNA 1-methyladenosine methyltransferase subunit GCD10
YBR061C TRM7; tRNA methyltransferase TRM7
YDL201W TRM8; tRNA (guanine46-N7)-methyltransferase
YML014W TRM9; tRNA (carboxymethyluridine(34)-5-O)-methyltransferase
YOL093W TRM10; tRNA (guanine(9)-N(1))-methyltransferase
YOL124C TRM11; tRNA (guanine-N2-)-methyltransferase
YOL125W TRM13; tRNA:m4X modification enzyme
YPL030W TRM44; tRNA (uracil) methyltransferase
YDR165W TRM82; Trm82p
YNR046W TRM112; RNA methylation protein TRM112
YOR239W ABP140; tRNA(Thr) (cytosine(32)-N(3))-methyltransferase
YPL207W TYW1; putative tRNA 4-demethylwyosine synthase
YML005W TRM12; tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase
YGL050W TYW3; tRNA methyltransferase TYW3
YOL141W PPM2; tRNA methyltransferase PPM2
YPL212C PUS1; pseudouridine synthase PUS1
YGL063W PUS2; pseudouridine synthase PUS2
YFL001W DEG1; pseudouridine synthase DEG1
YNL292W PUS4; pseudouridine synthase PUS4
YGR169C PUS6; pseudouridine synthase PUS6
YOR243C PUS7; pseudouridine synthase PUS7
YOL066C RIB2; bifunctional DRAP deaminase/tRNA pseudouridine synthase RIB2
YDL036C PUS9; pseudouridine synthase PUS9
YDL033C SLM3; tRNA-5-taurinomethyluridine 2-sulfurtransferase
YGL211W NCS6; Ncs6p
YNL119W NCS2; Ncs2p
YCL017C NFS1; cysteine desulfurase
YIL008W URM1; ubiquitin-related modifier URM1
YHR111W UBA4; Uba4p
YGR262C BUD32; serine/threonine protein kinase BUD32
YDL104C QRI7; putative N(6)-L-threonylcarbamoyladenine synthase
YKR038C KAE1; tRNA N6-adenosine threonylcarbamoyltransferase
YML036W CGI121; Cgi121p
YKR095W-A PCC1; chromatin DNA-binding EKC/KEOPS complex subunit PCC1
YJL184W GON7; chromatin DNA-binding EKC/KEOPS complex subunit GON7
YLR384C IKI3; Elongator subunit IKI3
YGR200C ELP2; Elongator subunit ELP2
YPL086C ELP3; Elongator subunit ELP3
YPL101W ELP4; Elongator subunit ELP4
YHR187W IKI1; Elongator subunit IKI1
YMR312W ELP6; Elongator subunit ELP6
YBL071W-A KTI11; Kti11p
YKL110C KTI12; Kti12p
YAL020C ATS1; Ats1p
YPL204W HRR25; serine/threonine protein kinase HRR25
YDL047W SIT4; type 2A-related serine/threonine-protein phosphatase SIT4
YFR040W SAP155; Sap155p
YGL229C SAP4; Sap4p
YJL098W SAP185; Sap185p
YKR028W SAP190; Sap190p
YGL169W SUA5; threonylcarbamoyladenylate synthase
YOR274W MOD5; tRNA dimethylallyltransferase
YMR023C MSS1; Mss1p
YGL236C MTO1; tRNA modification protein MTO1
YMR283C RIT1; tRNA A64-2'-O-ribosylphosphate transferase
YGL232W TAN1; putative tRNA acetyltransferase
YGR024C THG1; tRNA guanylyltransferase
YGL017W ATE1; arginyltransferase
YOL115W PAP2; non-canonical poly(A) polymerase PAP2
YIL079C AIR1; TRAMP complex RNA-binding subunit
YDL175C AIR2; TRAMP complex RNA-binding subunit
YJL050W MTR4; ATP-dependent RNA helicase MTR4
YGL173C XRN1; chromatin-binding exonuclease XRN1
YOR048C RAT1; ssRNA exonuclease RAT1
YOL064C MET22; 3'(2'),5'-bisphosphate nucleotidase
YKL027W TCD2; tRNA threonylcarbamoyladenosine dehydratase
YHR003C TCD1; tRNA threonylcarbamoyladenosine dehydratase
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K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
K14522 POP3; ribonuclease P/MRP protein subunit POP3 [EC:3.1.26.5]
K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
K14524 POP6; ribonuclease P/MRP protein subunit POP6 [EC:3.1.26.5]
K14526 POP7; ribonuclease P/MRP protein subunit POP7 [EC:3.1.26.5]
K14528 POP8; ribonuclease P/MRP protein subunit POP8 [EC:3.1.26.5]
K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
K03540 RPR2; ribonuclease P protein subunit RPR2 [EC:3.1.26.5]
K14533 RPM2; ribonuclease P protein component, mitochondrial [EC:3.1.26.5]
K00784 rnz; ribonuclease Z [EC:3.1.26.11]
K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
K15322 TSEN2; tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
K15323 TSEN34; tRNA-splicing endonuclease subunit Sen34 [EC:4.6.1.16]
K15325 SEN15; tRNA-splicing endonuclease subunit Sen15, fungi type
K15326 TSEN54; tRNA-splicing endonuclease subunit Sen54
K10669 TRPT1; 2'-phosphotransferase [EC:2.7.1.160]
K15435 CPD1; 2',3'-cyclic-nucleotide 3'-phosphodiesterase [EC:3.1.4.37]
K14679 TRL1; tRNA ligase [EC:6.5.1.3]
K07936 RAN; GTP-binding nuclear protein Ran
K07936 RAN; GTP-binding nuclear protein Ran
K14288 XPOT; exportin-T
K14290 XPO1; exportin-1
K14289 XPO5; exportin-5
K03231 EEF1A; elongation factor 1-alpha
K03231 EEF1A; elongation factor 1-alpha
K14547 UTP8; U3 small nucleolar RNA-associated protein 8
K08876 SCYL1; SCY1-like protein 1
K15436 TRPO3; transportin-3
K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12]
K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
K15437 AIMP1; aminoacyl tRNA synthase complex-interacting multifunctional protein 1
K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
K15440 TAD1; tRNA-specific adenosine deaminase 1 [EC:3.5.4.34]
K15441 TAD2; tRNA-specific adenosine deaminase 2 [EC:3.5.4.-]
K15442 TAD3; tRNA-specific adenosine deaminase 3
K05542 DUS1; tRNA-dihydrouridine synthase 1 [EC:1.3.1.88]
K05543 DUS2; tRNA-dihydrouridine synthase 2 [EC:1.3.1.91]
K05544 DUS3; tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
K05545 DUS4; tRNA-dihydrouridine synthase 4 [EC:1.3.1.90]
K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]
K15331 TRMT2B; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
K15333 TRM3; tRNA guanosine-2'-O-methyltransferase [EC:2.1.1.34]
K15334 NCL1; multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:2.1.1.202]
K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
K03256 TRM6; tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
K14864 FTSJ1; tRNA (cytidine32/guanosine34-2'-O)-methyltransferase [EC:2.1.1.205]
K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
K15444 TRM9; tRNA (uracil-5-)-methyltransferase TRM9 [EC:2.1.1.229]
K15445 TRMT10; tRNA (guanine9-N1)-methyltransferase [EC:2.1.1.221]
K15430 TRM11; tRNA (guanine10-N2)-methyltransferase [EC:2.1.1.214]
K15446 TRM13; tRNA:m4X modification enzyme [EC:2.1.1.225]
K15447 TRM44; tRNASer (uridine44-2'-O)-methyltransferase [EC:2.1.1.211]
K15443 TRM82; tRNA (guanine-N(7)-)-methyltransferase subunit TRM82
K15448 TRM112; multifunctional methyltransferase subunit TRM112
K17053 ABP140; tRNAThr (cytosine32-N3)-methyltransferase [EC:2.1.1.268]
K15449 TYW1; tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]
K07055 TRM12; tRNA wybutosine-synthesizing protein 2 [EC:2.5.1.114]
K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282]
K15451 PPM2; tRNA wybutosine-synthesizing protein 4 [EC:2.1.1.290 2.3.1.231]
K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
K15452 PUS2; mitochondrial tRNA pseudouridine27/28 synthase [EC:5.4.99.44]
K01855 PUS3; tRNA pseudouridine38/39 synthase [EC:5.4.99.45]
K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
K15453 PUS6; tRNA pseudouridine31 synthase [EC:5.4.99.42]
K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
K14655 RIB2; tRNA pseudouridine32 synthase / 2,5-diamino-6-(5-phospho-D-ribitylamino)-pyrimidin-4(3H)-one deaminase [EC:5.4.99.28]
K15454 PUS9; tRNA pseudouridine32 synthase [EC:5.4.99.28]
K21027 TRMU; tRNA-5-taurinomethyluridine 2-sulfurtransferase [EC:2.8.1.14]
K14168 CTU1; cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-]
K14169 CTU2; cytoplasmic tRNA 2-thiolation protein 2
K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
K12161 URM1; ubiquitin related modifier 1
K11996 MOCS3; adenylyltransferase and sulfurtransferase [EC:2.7.7.80 2.8.1.11]
K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
K15901 TPRKB; EKC/KEOPS complex subunit TPRKB/CGI121
K15902 LAGE3; EKC/KEOPS complex subunit LAGE3/PCC1
K15903 GON7; EKC/KEOPS complex subunit GON7
K11373 ELP1; elongator complex protein 1
K11374 ELP2; elongator complex protein 2
K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
K11375 ELP4; elongator complex protein 4
K11376 ELP5; elongator complex protein 5
K11377 ELP6; elongator complex protein 6
K15455 DPH3; diphthamide biosynthesis protein 3
K15456 KTI12; protein KTI12
K15462 KTI13; protein ATS1
K14758 HRR25; casein kinase I homolog HRR25 [EC:2.7.11.1]
K15427 SIT4; serine/threonine-protein phosphatase PP1-1 [EC:3.1.3.16]
K15457 SAP155; SIT4-associating protein SAP155
K15457 SAP155; SIT4-associating protein SAP155
K15458 SAP185_190; SIT4-associating protein SAP185/190
K15458 SAP185_190; SIT4-associating protein SAP185/190
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
K15463 RIT1; tRNA A64-2'-O-ribosylphosphate transferase [EC:2.4.2.-]
K06963 TAN1; tRNA acetyltransferase TAN1
K10761 THG1; tRNA(His) guanylyltransferase [EC:2.7.7.79]
K00685 ATE1; arginyl-tRNA---protein transferase [EC:2.3.2.8]
K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
K12597 AIR1_2; protein AIR1/2
K12597 AIR1_2; protein AIR1/2
K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:3.6.4.13]
K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
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03012 Translation factors [BR:sce03012]
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03110 Chaperones and folding catalysts [BR:sce03110]
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04131 Membrane trafficking [BR:sce04131]
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04121 Ubiquitin system [BR:sce04121]
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03051 Proteasome [BR:sce03051]
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03032 DNA replication proteins [BR:sce03032]
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03036 Chromosome and associated proteins [BR:sce03036]
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03400 DNA repair and recombination proteins [BR:sce03400]
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03029 Mitochondrial biogenesis [BR:sce03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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