KEGG Orthology (KO) - Shigella flexneri 301 (serotype 2a)

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     KO
 09100 Metabolism
 
   09101 Carbohydrate metabolism
     00010 Glycolysis / Gluconeogenesis [PATH:sfl00010]
     00020 Citrate cycle (TCA cycle) [PATH:sfl00020]
     00030 Pentose phosphate pathway [PATH:sfl00030]
     00040 Pentose and glucuronate interconversions [PATH:sfl00040]
     00051 Fructose and mannose metabolism [PATH:sfl00051]
     00052 Galactose metabolism [PATH:sfl00052]
     00053 Ascorbate and aldarate metabolism [PATH:sfl00053]
     00500 Starch and sucrose metabolism [PATH:sfl00500]
     00520 Amino sugar and nucleotide sugar metabolism [PATH:sfl00520]
     00620 Pyruvate metabolism [PATH:sfl00620]
     00630 Glyoxylate and dicarboxylate metabolism [PATH:sfl00630]
     00640 Propanoate metabolism [PATH:sfl00640]
     00650 Butanoate metabolism [PATH:sfl00650]
       SF2854 yqeF; acyltransferase
       SF3922 fadB; multifunctional fatty acid oxidation complex subunit alpha
       SF2419 fadJ; multifunctional fatty acid oxidation complex subunit alpha
       SF1240 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase
       SF0574 sdhA; succinate dehydrogenase flavoprotein subunit
       SF0573 sdhB; succinate dehydrogenase iron-sulfur subunit
       SF0576 sdhC; succinate dehydrogenase cytochrome b556 subunit
       SF0575 sdhD; succinate dehydrogenase cytochrome b556 small membrane subunit
       SF4312 frdA; fumarate reductase flavoprotein subunit
       SF4311 frdB; fumarate reductase iron-sulfur subunit
       SF4310 frdC; fumarate reductase subunit C
       SF4309 frdD; fumarate reductase subunit D
       SF1734 gadB; glutamate decarboxylase
       SF3594 gadA; glutamate decarboxylase
       SF2498 hypothetical protein
       SF1307 goaG; 4-aminobutyrate transaminase
       SF2689 gabT; GABA transaminase
       SF3954 yihU; 3-sulfolactaldehyde reductase
       SF0898 pflB; formate acetyltransferase 1
       SF3154 tdcE; formate acetyltransferase 3
       SF1822 ydbK; oxidoreductase, Fe-S subunit
       SF0072 ilvI; acetolactate synthase III large subunit
       SF3790 ilvB; acetolactate synthase catalytic subunit
       SF3843 ilvG; acetolactate synthase 2 catalytic subunit
       SF0073 ilvH; acetolactate synthase small subunit
       SF3791 ilvN; acetolactate synthase 1 regulatory subunit
       SF3844 ilvM; acetolactate synthase 2 regulatory subunit
K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
K00241 sdhC; succinate dehydrogenase cytochrome b subunit
K00242 sdhD; succinate dehydrogenase membrane anchor subunit
K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
K00246 frdC; succinate dehydrogenase subunit C
K00247 frdD; succinate dehydrogenase subunit D
K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
K08318 yihU; 4-hydroxybutyrate dehydrogenase / sulfolactaldehyde 3-reductase [EC:1.1.1.61 1.1.1.373]
K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
     00660 C5-Branched dibasic acid metabolism [PATH:sfl00660]
     00562 Inositol phosphate metabolism [PATH:sfl00562]
 
   09102 Energy metabolism
 
   09103 Lipid metabolism
 
   09104 Nucleotide metabolism
 
   09105 Amino acid metabolism
     00250 Alanine, aspartate and glutamate metabolism [PATH:sfl00250]
       SF0925 aspC; aromatic amino acid aminotransferase
       SF1456 ansA; cytoplasmic asparaginase I
       SF2954 ansB; L-asparaginase II
       SF0778 ybiK; isoaspartyl peptidase
       SF3824 asnA; asparagine synthetase AsnA
       SF0619 asnB; asparagine synthetase AsnB
       SF0269 yafV; C-N hydrolase amidase
       SF2366 aminotransferase
       SF4293 aspA; aspartate ammonia-lyase
       SF3213 argG; argininosuccinate synthase
       SF4037 argH; argininosuccinate lyase
       SF4332 purA; adenylosuccinate synthetase
       SF1150 purB; adenylosuccinate lyase
       SF4245 pyrB; aspartate carbamoyltransferase
       SF4246 pyrI; aspartate carbamoyltransferase
       SF1734 gadB; glutamate decarboxylase
       SF3594 gadA; glutamate decarboxylase
       SF2498 hypothetical protein
       SF1307 goaG; 4-aminobutyrate transaminase
       SF2689 gabT; GABA transaminase
       SF3252 gltB; glutamate synthase
       SF3253 gltD; glutamate synthase
       SF1462 gdhA; glutamate dehydrogenase
       SF3940 glnA; glutamine synthetase
       SF0030 carB; carbamoyl phosphate synthase large subunit
       SF0029 carA; carbamoyl phosphate synthase small subunit
       SF1569 yneH; glutaminase
       SF0430 ybaS; glutaminase
       SF3809 glmS; glucosamine--fructose-6-phosphate aminotransferase
       SF2388 purF; amidophosphoribosyltransferase
K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
K13566 NIT2; omega-amidase [EC:3.5.1.3]
K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
K01915 glnA; glutamine synthetase [EC:6.3.1.2]
K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
K01425 glsA; glutaminase [EC:3.5.1.2]
K01425 glsA; glutaminase [EC:3.5.1.2]
K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
     00260 Glycine, serine and threonine metabolism [PATH:sfl00260]
     00270 Cysteine and methionine metabolism [PATH:sfl00270]
     00280 Valine, leucine and isoleucine degradation [PATH:sfl00280]
     00290 Valine, leucine and isoleucine biosynthesis [PATH:sfl00290]
     00300 Lysine biosynthesis [PATH:sfl00300]
     00310 Lysine degradation [PATH:sfl00310]
     00220 Arginine biosynthesis [PATH:sfl00220]
     00330 Arginine and proline metabolism [PATH:sfl00330]
     00340 Histidine metabolism [PATH:sfl00340]
     00350 Tyrosine metabolism [PATH:sfl00350]
     00360 Phenylalanine metabolism [PATH:sfl00360]
     00380 Tryptophan metabolism [PATH:sfl00380]
     00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:sfl00400]
 
   09106 Metabolism of other amino acids
     00410 beta-Alanine metabolism [PATH:sfl00410]
       SF0128 panD; aspartate alpha-decarboxylase
       SF1734 gadB; glutamate decarboxylase
       SF3594 gadA; glutamate decarboxylase
       SF2498 hypothetical protein
       SF1307 goaG; 4-aminobutyrate transaminase
       SF2689 gabT; GABA transaminase
       SF1774 gamma-aminobutyraldehyde dehydrogenase
       SF0130 panC; pantoate--beta-alanine ligase
       SF2231 dihydropyrimidine dehydrogenase subunit A
       SF3922 fadB; multifunctional fatty acid oxidation complex subunit alpha
       SF2419 fadJ; multifunctional fatty acid oxidation complex subunit alpha
K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
     00430 Taurine and hypotaurine metabolism [PATH:sfl00430]
       SF1734 gadB; glutamate decarboxylase
       SF3594 gadA; glutamate decarboxylase
       SF2498 hypothetical protein
       SF3464 ggt; gamma-glutamyltranspeptidase
       SF0250 tauD; taurine dioxygenase
       SF2373 pta; phosphate acetyltransferase
       SF2372 ackA; acetate kinase A/propionate kinase 2
K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
K00925 ackA; acetate kinase [EC:2.7.2.1]
     00440 Phosphonate and phosphinate metabolism
     00450 Selenocompound metabolism [PATH:sfl00450]
     00460 Cyanoamino acid metabolism [PATH:sfl00460]
     00470 D-Amino acid metabolism [PATH:sfl00470]
     00480 Glutathione metabolism [PATH:sfl00480]
 
   09107 Glycan biosynthesis and metabolism
 
   09108 Metabolism of cofactors and vitamins
 
   09109 Metabolism of terpenoids and polyketides
 
   09110 Biosynthesis of other secondary metabolites
 
   09111 Xenobiotics biodegradation and metabolism
 
   09112 Not included in regular maps
 
 09120 Genetic Information Processing
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
   09141 Transport and catabolism
 
   09143 Cell growth and death
 
   09144 Cellular community - eukaryotes
 
   09145 Cellular community - prokaryotes
     02024 Quorum sensing [PATH:sfl02024]
       SF2714 ygaG; S-ribosylhomocysteinase
       SF4327 hfq; RNA-binding protein Hfq
       SF1267 trpE; anthranilate synthase component I
       SF2099 rfbF; dTDP-rhamnosyl transferase
       SF0550 aroG; 3-deoxy-7-phosphoheptulonate synthase
       SF1526 aroH; phospho-2-dehydro-3-deoxyheptonate aldolase
       SF2661 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase
       SF3067 ygiY; sensor protein QseC
       SF3066 ygiX; DNA-binding transcriptional regulator QseB
       SF2603 yfhK; 2-component sensor protein
       SF2601 yfhA; response regulator GlrR
       SF1940 flhC; transcriptional activator FlhC
       SF1959 sdiA; ftsQAZ gene cluster transcriptional regulator
       SF1734 gadB; glutamate decarboxylase
       SF3594 gadA; glutamate decarboxylase
       SF2498 hypothetical protein
       SF1735 xasA; acid sensitivity protein transporter
       SF2499 amino acid antiporter
       SF1584 ydeY; autoinducer 2 ABC transporter permease LsrC
       SF1585 ydeZ; autoinducer 2 import system permease LsrD
       SF1583 autoinducer 2 ABC transporter ATP-binding protein LsrA
       SF1582 ydeW; transcriptional regulator LsrR
       SF1578 autoinducer 2 aldolase
       SF1577 autoinducer-2 (AI-2) modifying protein LsrG
       SF1775 ABC transporter permease
       SF3476 livK; leucine ABC transporter substrate-binding protein LivK
       SF3478 livJ; leucine ABC transporter substrate-binding protein LivK
       SF3475 livH; branched-chain amino acid ABC transporter permease
       SF3474 livM; leucine/isoleucine/valine ABC transporter permease
       SF3473 livG; ABC transporter ATP-binding protein
       SF3472 livF; ABC transporter ATP-binding protein
       SF1996 rcsA; colanic acid capsular biosynthesis activation protein A
       SF1423 fadD; long-chain-fatty-acid--CoA ligase
       SF3376 crp; DNA-binding transcriptional dual regulator Crp
       SF4159 yjbK; regulator
       SF1281 ribA; GTP cyclohydrolase II
       SF0351 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase
       SF1770 hypothetical protein
       SF1841 transport protein
       SF1244 oppA; oligopeptide ABC transporter substrate-binding protein OppA
       SF1245 oppB; oligopeptide ABC transporter permease OppB
       SF1246 oppC; oligopeptide ABC transporter permease OppC
       SF1247 oppD; oligopeptide ABC transporter ATP-binding protein OppD
       SF1248 oppF; oligopeptide ABC transporter ATP-binding protein OppF
       SF1741 ABC transporter ATP-binding protein
       SF1742 peptide ABC transporter ATP-binding protein
       SF3759 yidC; insertase
       SF4054 secE; preprotein translocase subunit SecE
       SF3215 secG; preprotein translocase subunit SecG
       SF3332 secY; preprotein translocase subunit SecY
       SF0344 yajC; preprotein translocase subunit YajC
       SF0095 secA; preprotein translocase subunit SecA
       SF3482 ftsY; signal recognition particle-docking protein FtsY
       SF3648 secB; preprotein translocase subunit SecB
       SF2670 ffh; signal recognition particle protein
K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
K03666 hfq; host factor-I protein
K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
K07666 qseB; two-component system, OmpR family, response regulator QseB
K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
K07715 glrR; two-component system, NtrC family, response regulator GlrR
K02402 flhC; flagellar transcriptional activator FlhC
K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
K20265 gadC; glutamate:GABA antiporter
K20265 gadC; glutamate:GABA antiporter
K10556 lsrC; AI-2 transport system permease protein
K10557 lsrD; AI-2 transport system permease protein
K10558 lsrA; AI-2 transport system ATP-binding protein
K11531 lsrR; lsr operon transcriptional repressor
K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245]
K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32]
K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
K01999 livK; branched-chain amino acid transport system substrate-binding protein
K01999 livK; branched-chain amino acid transport system substrate-binding protein
K01997 livH; branched-chain amino acid transport system permease protein
K01998 livM; branched-chain amino acid transport system permease protein
K01995 livG; branched-chain amino acid transport system ATP-binding protein
K01996 livF; branched-chain amino acid transport system ATP-binding protein
K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
K15580 oppA; oligopeptide transport system substrate-binding protein
K15580 oppA; oligopeptide transport system substrate-binding protein
K15581 oppB; oligopeptide transport system permease protein
K15582 oppC; oligopeptide transport system permease protein
K15583 oppD; oligopeptide transport system ATP-binding protein
K10823 oppF; oligopeptide transport system ATP-binding protein
K02031 ddpD; peptide/nickel transport system ATP-binding protein
K02032 ddpF; peptide/nickel transport system ATP-binding protein
K03217 yidC; YidC/Oxa1 family membrane protein insertase
K03073 secE; preprotein translocase subunit SecE
K03075 secG; preprotein translocase subunit SecG
K03076 secY; preprotein translocase subunit SecY
K03210 yajC; preprotein translocase subunit YajC
K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
K03110 ftsY; fused signal recognition particle receptor
K03071 secB; preprotein translocase subunit SecB
K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
     05111 Biofilm formation - Vibrio cholerae
     02025 Biofilm formation - Pseudomonas aeruginosa
     02026 Biofilm formation - Escherichia coli
 
   09142 Cell motility
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
 09190 Not Included in Pathway or Brite

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Last updated: March 27, 2024