DNA Repair and Recombination Proteins - Shigella flexneri 8401 (serotype 5b)

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     KO
 Eukaryotic type
 
 Prokaryotic type
   SSBR (single strand breaks repair)
     Direct repair
     BER (base exicision repair)
     NER (nucleotide excision repair)
     MMR (mismatch excision repair)
       Mismatch and loop recognition factors
       Molecular matchmaker
       Strand discrimination factor
       DNA exonucleases
       DNA polymerase III holoenzyme
         SFV_0167 dnaE; DNA polymerase III, alpha subunit
         SFV_3811 dnaN; DNA polymerase III, beta-subunit
         SFV_4234 holC; DNA polymerase III, chi subunit
         SFV_0686 holA; DNA polymerase III, delta subunit
         SFV_1119 holB; DNA polymerase III, delta prime subunit
         SFV_0198 dnaQ; DNA polymerase III, epsilon subunit
         SFV_0443 dnaX; DNA polymerase III, tau and gamma subunits
         SFV_4406 holD; DNA polymerase III, psi subunit
         SFV_1844 holE; DNA polymerase III, theta subunit
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] 
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] 
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] 
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] 
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] 
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] 
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] 
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] 
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] 
       DNA ligase
       Other MMR factors
   DSBR (double strand breaks repair)
   TLS (translesion DNA synthesis) factors
   Other factors with a suspected DNA repair function

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Last updated: March 29, 2024