Shew_1054 RNAse III
       Shew_0559 Exonuclease, RNase T and DNA polymerase III
       Shew_1055 GTP-binding protein Era
       Shew_0871 GTP1/OBG sub domain protein
       Shew_3129 transcriptional regulator, TraR/DksA family
       Shew_2828 NusA antitermination factor
       Shew_1191 NusB antitermination factor
       Shew_0146 transcription antitermination protein nusG
       Shew_0916 pseudouridine synthase
       Shew_2975 ribosomal small subunit pseudouridine synthase A
       Shew_3180 pseudouridine synthase
       Shew_0879 dimethyladenosine transferase
       Shew_2739 Fmu (Sun) domain protein
       Shew_3738 sun protein
       Shew_1891 Fmu (Sun) domain protein
       Shew_3230 16S rRNA m(2)G 1207 methyltransferase
       Shew_3607 putative methyltransferase
       Shew_3224 protein of unknown function DUF558
       Shew_1583 putative RNA methylase, NOL1/NOP2/sun family
       Shew_3855 methyltransferase GidB
       Shew_3461 S-adenosyl-methyltransferase MraW
       Shew_0228 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
       Shew_3647 protein of unknown function DUF548
       Shew_1005 rRNA (guanine-N(1)-)-methyltransferase
       Shew_1613 rRNA (guanine-N(1)-)-methyltransferase
       Shew_3288 RNA methyltransferase, TrmH family, group 3
       Shew_2835 ribosomal RNA methyltransferase RrmJ/FtsJ
       Shew_3741 protein of unknown function DUF890
       Shew_2886 rRNA (guanine-N(2)-)-methyltransferase
       Shew_2934 protein of unknown function DUF163
       Shew_2397 conserved hypothetical protein
       Shew_3324 conserved hypothetical protein
       Shew_3648 protein of unknown function DUF519
       Shew_1812 putative RNA methylase
       Shew_2761 conserved hypothetical protein
       Shew_1287 radical SAM enzyme, Cfr family
       Shew_1201 23S rRNA (uracil-5-)-methyltransferase RumA
       Shew_0801 23S rRNA (uracil-5-)-methyltransferase RumB
       Shew_2529 pseudouridine synthase
       Shew_0783 ribosomal large subunit pseudouridine synthase A
       Shew_1460 pseudouridine synthase
       Shew_0099 pseudouridine synthase Rlu family protein, TIGR01621
       Shew_2547 pseudouridine synthase
       Shew_3348 pseudouridine synthase
       Shew_2246 ribosomal large subunit pseudouridine synthase B
       Shew_1594 ribosomal large subunit pseudouridine synthase C
       Shew_2950 ribosomal large subunit pseudouridine synthase D
       Shew_0814 pseudouridine synthase
       Shew_1562 ribosomal large subunit pseudouridine synthase E
       Shew_2943 SSU ribosomal protein S18P alanine acetyltransferase
       Shew_0248 GCN5-related N-acetyltransferase
       Shew_3664 SSU ribosomal protein S6P modification protein
       Shew_3037 alpha-L-glutamate ligases, RimK family
       Shew_1064 16S rRNA processing protein RimM
       Shew_3033 uncharacterized domain protein
       Shew_0331 LSU ribosomal protein L11P methyltransferase
       Shew_2417 modification methylase, HemK family
       Shew_1557 Cupin 4 family protein
       Shew_1593 RNAse E
       Shew_0407 RNAse G
       Shew_1143 Holliday junction resolvase YqgF
       Shew_0598 DEAD/DEAH box helicase domain protein
       Shew_0531 DEAD/DEAH box helicase domain protein
       Shew_0767 DEAD/DEAH box helicase domain protein
       Shew_0558 ribosome small subunit-dependent GTPase A
       Shew_1294 small GTP-binding protein
       Shew_1589 GTP-binding protein, HSR1-related
       Shew_0567 GTP-binding protein, HSR1-related
       Shew_3730 translation factor SUA5
       Shew_3499 (p)ppGpp synthetase I, SpoT/RelA
       Shew_2826 ribosome-binding factor A
       Shew_2829 protein of unknown function DUF150
       Shew_2468 RNA-binding S4 domain protein
       Shew_2933 iojap-like protein
       Shew_2925 protein of unknown function UPF0054
       Shew_2836 protein of unknown function UPF0044
       Shew_2447 conserved hypothetical protein
       Shew_0415 protein of unknown function DUF615
       Shew_1816 ribosome modulation factor
       Shew_3312 sigma 54 modulation protein / SSU ribosomal protein S30P
       Shew_1073 sigma 54 modulation protein / SSU ribosomal protein S30P
       Shew_1241 sigma 54 modulation protein/ribosomal protein S30EA
       Shew_2919 GTP-binding protein YchF
       Shew_1598 protein of unknown function DUF177

K03685 rnc; ribonuclease III [EC:3.1.26.3]
K13288 orn; oligoribonuclease [EC:3.1.-.-]
K03595 era; GTPase
K03979 obgE; GTPase [EC:3.6.5.-]
K06204 dksA; RNA polymerase-binding transcription factor
K02600 nusA; transcription termination/antitermination protein NusA
K03625 nusB; transcription antitermination protein NusB
K02601 nusG; transcription termination/antitermination protein NusG
K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
K02860 rimM; 16S rRNA processing protein RimM
K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
K08300 rne; ribonuclease E [EC:3.1.26.12]
K08301 rng; ribonuclease G [EC:3.1.26.-]
K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:3.6.4.13]
K05592 deaD; ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
K05590 srmB; ATP-dependent RNA helicase SrmB [EC:3.6.4.13]
K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
K03977 engA; GTPase
K14540 rbgA; ribosome biogenesis GTPase A
K03665 hflX; GTPase
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
K02834 rbfA; ribosome-binding factor A
K09748 rimP; ribosome maturation factor RimP
K14761 rlbA; ribosome-associated protein
K09710 ybeB; ribosome-associated protein
K07042 ybeY; probable rRNA maturation factor
K07574 yhbY; RNA-binding protein
K14762 yibL; ribosome-associated protein
K09889 yjgA; ribosome-associated protein
K03812 rmf; ribosome modulation factor
K05808 hpf; ribosome hibernation promoting factor
K05809 raiA; ribosome-associated inhibitor A
K05809 raiA; ribosome-associated inhibitor A
K06942 ychF; ribosome-binding ATPase
K07040 yceD; DUF177 domain-containing protein