KEGG Orthology (KO) - Streptomyces avermitilis

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
     03020 RNA polymerase [PATH:sma03020]
       SAVERM_440 rpoA2; putative RNA polymerase alpha subunit
       SAVERM_4953 rpoA; RNA polymerase alpha subunit
       SAVERM_4914 rpoB; RNA polymerase beta subunit
       SAVERM_4915 rpoC; RNA polymerase beta prime subunit
       SAVERM_6872 rpoZ; RNA polymerase omega subunit
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
     03022 Basal transcription factors
     03040 Spliceosome
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:sma03000]
     03021 Transcription machinery [BR:sma03021]
       SAVERM_3912 putative ATP-dependent DNA helicase
       SAVERM_440 rpoA2; putative RNA polymerase alpha subunit
       SAVERM_4953 rpoA; RNA polymerase alpha subunit
       SAVERM_4914 rpoB; RNA polymerase beta subunit
       SAVERM_4915 rpoC; RNA polymerase beta prime subunit
       SAVERM_6872 rpoZ; RNA polymerase omega subunit
       SAVERM_2444 rpoD; RNA polymerase major sigma factor, sigma-70 family
       SAVERM_5679 sig47; putative RNA polymerase sigma factor
       SAVERM_3038 sig22; putative RNA polymerase ECF-subfamily sigma factor
       SAVERM_6582 sig53; putative RNA polymerase ECF-subfamily sigma factor
       SAVERM_1195 sig16; putative RNA polymerase ECF-subfamily sigma factor
       SAVERM_5123 sig45; putative RNA polymerase ECF-subfamily sigma factor
       SAVERM_4303 sig37; putative RNA polymerase ECF-subfamily sigma factor
       SAVERM_4427 sig39; putative RNA polymerase ECF-subfamily sigma factor
       SAVERM_3318 sig24; putative RNA polymerase ECF-subfamily sigma factor
       SAVERM_4999 sig44; putative RNA polymerase ECF-subfamily sigma factor
       SAVERM_3363 sig26; putative RNA polymerase ECF-subfamily sigma factor
       SAVERM_5398 sig46; putative RNA polymerase ECF-subfamily sigma factor
       SAVERM_909 sig11; putative RNA polymerase ECF-subfamily sigma factor
       SAVERM_3385 sig27; putative RNA polymerase ECF-subfamily sigma factor
       SAVERM_4735 bds; putative RNA polymerase ECF-subfamily sigma factor (BldN)
       SAVERM_93 sig2; putative RNA polymerase ECF-subfamily sigma factor
       SAVERM_7068 sig55; putative RNA polymerase ECF-subfamily sigma factor
       SAVERM_7292 sig56; putative RNA polymerase ECF-subfamily sigma factor
       SAVERM_614 sig5; putative RNA polymerase ECF-subfamily sigma factor
       SAVERM_898 sig10; putative RNA polymerase ECF-subfamily sigma factor
       SAVERM_3013 sig21; putative RNA polymerase sigma factor, sigH
       SAVERM_1087 sig14; putative RNA polymerase sigma factor
       SAVERM_7400 sig57; putative RNA polymerase sigma factor
       SAVERM_741 sig8; putative RNA polymerase sigma factor
       SAVERM_1873 sig19; putative RNA polymerase sigma factor
       SAVERM_1151 sig15; putative RNA polymerase sigma factor
       SAVERM_4186 sig35; putative RNA polymerase sigma factor
       SAVERM_4185 sig34; putative RNA polymerase sigma factor
       SAVERM_2630 whiG; putative RNA polymerase sigma factor
       SAVERM_2553 nusA; putative transcriptional termination/antitermination factor
       SAVERM_6860 nusB; putative transcription termination protein
       SAVERM_4909 nusG; putative transcription antitermination protein
       SAVERM_1096 rsbT; putative anti-sigma factor
       SAVERM_1095 rsbS; putative anti-sigma factor antagonist
       SAVERM_1094 rsbR; putative positive regulatory protein
       SAVERM_922 prpC3; putative magnesium or manganese-dependent protein phosphatase
       SAVERM_923 putative hydrolase
       SAVERM_4614 rsbV; anti-sigma factor antagonist
       SAVERM_3012 rsbW1; putative anti-sigma factor
       SAVERM_4236 hypothetical protein
       SAVERM_3301 greA; putative transcription elongation factor
       SAVERM_1310 rho2; putative transcription termination factor
       SAVERM_2915 rho1; putative transcription termination factor Rho
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:3.6.4.12]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03086 rpoD; RNA polymerase primary sigma factor
K03086 rpoD; RNA polymerase primary sigma factor
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03090 sigB; RNA polymerase sigma-B factor
K03090 sigB; RNA polymerase sigma-B factor
K03090 sigB; RNA polymerase sigma-B factor
K03090 sigB; RNA polymerase sigma-B factor
K03090 sigB; RNA polymerase sigma-B factor
K03090 sigB; RNA polymerase sigma-B factor
K03090 sigB; RNA polymerase sigma-B factor
K03090 sigB; RNA polymerase sigma-B factor
K02405 fliA; RNA polymerase sigma factor for flagellar operon FliA
K02600 nusA; transcription termination/antitermination protein NusA
K03625 nusB; transcription antitermination protein NusB
K02601 nusG; transcription termination/antitermination protein NusG
K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
K17762 rsbS; rsbT antagonist protein RsbS
K17763 rsbR; rsbT co-antagonist protein RsbR
K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
K19707 rsbQ; sigma-B regulation protein RsbQ
K04749 rsbV; anti-sigma B factor antagonist
K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
K03624 greA; transcription elongation factor GreA
K03628 rho; transcription termination factor Rho
K03628 rho; transcription termination factor Rho
     03019 Messenger RNA biogenesis [BR:sma03019]
     03041 Spliceosome
     03011 Ribosome [BR:sma03011]
     03009 Ribosome biogenesis [BR:sma03009]
     03016 Transfer RNA biogenesis [BR:sma03016]
     03012 Translation factors [BR:sma03012]
     03110 Chaperones and folding catalysts [BR:sma03110]
     04131 Membrane trafficking [BR:sma04131]
     04121 Ubiquitin system [BR:sma04121]
     03051 Proteasome [BR:sma03051]
     03032 DNA replication proteins [BR:sma03032]
     03036 Chromosome and associated proteins [BR:sma03036]
     03400 DNA repair and recombination proteins [BR:sma03400]
       SAVERM_6270 ogt3; putative methylated-DNA--protein-cysteine S-methyltransferase
       SAVERM_2053 ogt2; putative methylated-DNA--protein-cysteine S-methyltransferase
       SAVERM_1933 ogt1; putative methylated-DNA--protein-cysteine S-methyltransferase
       SAVERM_2085 alkA2; putative ADA-like regulatory protein
       SAVERM_1212 phrB; putative deoxyribodipyrimidine photolyase
       SAVERM_1527 ung1; putative uracil-DNA glycosylase
       SAVERM_7011 ung2; putative uracil-DNA glycosylase
       SAVERM_6486 putative 3-methyladenine DNA glycosylase
       SAVERM_4707 mutY; putative A/G-specific adenine glycosylase
       SAVERM_4593 nth; putative endonuclease III
       SAVERM_7136 ligB; putative DNA ligase
       SAVERM_3912 putative ATP-dependent DNA helicase
       SAVERM_3187 putative MutT-like protein
       SAVERM_6513 putative DNA hydrolase
       SAVERM_2447 putative DNA hydrolase
       SAVERM_4071 hypothetical protein
       SAVERM_2399 dut; putative deoxyuridine 5'-triphosphate pyrophosphatase
       SAVERM_1443 putative DNA repair protein
       SAVERM_7076 mug; putative G/U mismatch-specific DNA glycosylase
       SAVERM_6242 hypothetical protein
       SAVERM_1934 alkA1; putative ADA-like regulatory protein
       SAVERM_3121 tagA; putative DNA-3-methyladenine glycosylase I
       SAVERM_2664 mutM1; putative formamidopyrimidine-DNA glycosylase
       SAVERM_7289 mutM2; putative formamidopyrimidine-DNA glycosylase
       SAVERM_2501 nei1; putative endonuclease VIII and DNA N-glycosylase with an AP lyase activity
       SAVERM_5427 nei2; putative endonuclease VIII and DNA N-glycosylase with an AP lyase activity
       SAVERM_3628 exoA; putative exodeoxyribonuclease
       SAVERM_1966 xthA; putative exonuclease
       SAVERM_6091 nfo; putative endonuclease IV
       SAVERM_1684 nfi; putative endonuclease V
       SAVERM_2748 ligA; putative DNA ligase
       SAVERM_6227 polA1; putative DNA polymerase I
       SAVERM_4636 polA2; putative DNA polymerase I
       SAVERM_6286 uvrA1; putative excinuclease ABC subunit A
       SAVERM_6273 uvrB; putative excinuclease ABC subunit B
       SAVERM_6291 uvrC; putative excinuclease ABC subunit C
       SAVERM_3463 uvrD1; putative ATP-dependent DNA helicase
       SAVERM_3072 uvrD4; putative ATP-dependent DNA helicase
       SAVERM_3076 adnB; putative ATP-dependent DNA helicase
       SAVERM_4914 rpoB; RNA polymerase beta subunit
       SAVERM_4915 rpoC; RNA polymerase beta prime subunit
       SAVERM_440 rpoA2; putative RNA polymerase alpha subunit
       SAVERM_4953 rpoA; RNA polymerase alpha subunit
       SAVERM_6872 rpoZ; RNA polymerase omega subunit
       SAVERM_3549 mfd; putative transcriptional-repair coupling factor
       SAVERM_3211 xseA; putative exoribonuclease large subunit
       SAVERM_3212 xseB; putative exoribonuclease small subunit
       SAVERM_6143 dnaE1; putative DNA polymerase III alpha subunit
       SAVERM_4317 dnaN1; putative DNA polymerase III beta subunit
       SAVERM_3362 dnaN2; putative DNA polymerase III beta subunit
       SAVERM_2004 putative siderophore biosynthesis protein/iron transport protein
       SAVERM_5558 holA; putative DNA polymerase III delta subunit
       SAVERM_4623 holB; putative DNA polymerase III delta prime subunit
       SAVERM_6439 dnaQ1; putative DNA polymerase III epsilon subunit
       SAVERM_2147 dnaQ3; putative DNA polymerase III epsilon subunit
       SAVERM_4150 dnaZX; putative DNA polymerase III gamma and tau subunit
       SAVERM_4288 ssb1; putative single-stranded DNA-binding protein
       SAVERM_5365 ssb2; putative single-strand DNA-binding protein
       SAVERM_5329 recD; putative exodeoxyribonuclease V
       SAVERM_2492 recA; putative recombination protein RecA
       SAVERM_6834 ruvA; putative Holliday junction DNA helicase subunit B
       SAVERM_6835 ruvB; putative Holliday junction DNA helicase subunit A
       SAVERM_6833 ruvC; putative Holliday junction nuclease
       SAVERM_6875 priA; putative primosomal protein
       SAVERM_7056 sbcC; putative ATP-dependent dsDNA exonuclease
       SAVERM_7055 sbcD; putative ATP-dependent dsDNA exonuclease
       SAVERM_4710 radA; putative DNA repair protein
       SAVERM_4319 recF; putative DNA recombination and repair protein
       SAVERM_2671 recG; putative ATP-dependent DNA helicase
       SAVERM_5628 recO; putative DNA recombination and repair protein
       SAVERM_4557 recR; putative recombination and repair protein
       SAVERM_6499 recN; putative DNA recombination and repair protein
       SAVERM_7537 cas1; cas1
       SAVERM_2945 ku1; putative Ku70/Ku80 protein
       SAVERM_2946 ligD; putative DNA ligase
       SAVERM_2423 parC; putative subunit of topoisomerase IV
       SAVERM_4322 gyrA; putative DNA gyrase subunit A
       SAVERM_2442 parE; putative subunit of topoisomerase IV
       SAVERM_4321 gyrB; putative DNA gyrase subunit B
       SAVERM_4621 topA; putative DNA topoisomerase I
       SAVERM_2684 hupB; putative histone-like DNA-binding protein
       SAVERM_5127 hup; putative DNA-binding protein Hu 1
       SAVERM_4851 recQ; putative ATP-dependent DNA helicase
       SAVERM_2450 putative ATP-dependent DNA helicase
       SAVERM_6985 dinB; putative DNA polymerase IV, DNA damage inducible protein
       SAVERM_2463 lexA; putative SOS regulatory protein LexA
       SAVERM_6555 dnaE2; putative DNA polymerase III alpha subunit
       SAVERM_2491 recX; putative regulatory protein RecX
       SAVERM_2464 dinG; putative ATP-dependent helicase
       SAVERM_2500 lhr; putative ATP-dependent DNA helicase
       SAVERM_6505 nudF; putative ADP-ribose pyrophosphatase
       SAVERM_3026 nrdL; putative ribonucleoside-diphosphate reductase alpha chain
       SAVERM_2461 nrdA; putative vitamin B12-dependent ribonucleotide reductase
       SAVERM_3027 nrdM; putative ribonucleoside-diphosphate reductase beta chain
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phrB; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTH; endonuclease III [EC:4.2.99.18]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:3.6.4.12]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP pyrophosphatase [EC:3.6.1.23]
K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA [EC:3.6.4.12]
K03551 ruvB; holliday junction DNA helicase RuvB [EC:3.6.4.12]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:3.6.4.12]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K15342 cas1; CRISP-associated protein Cas1
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:3.6.4.12]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-]
K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
     03029 Mitochondrial biogenesis [BR:sma03029]
 
   09183 Protein families: signaling and cellular processes
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

[ KO | BRITE | KEGG2 | KEGG ]
Last updated: July 5, 2020