KEGG Orthology (KO) - Serratia plymuthica 4Rx13

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     KO
 09100 Metabolism
 
   09101 Carbohydrate metabolism
 
   09102 Energy metabolism
 
   09103 Lipid metabolism
 
   09104 Nucleotide metabolism
     00230 Purine metabolism [PATH:srl00230]
       SOD_c40810 nudF; ADp-ribose pyrophosphatase NudF
       SOD_c44110 nudE; ADp compounds hydrolase NudE
       SOD_c05330 deoB; phosphopentomutase DeoB
       SOD_c11120 pgm; phosphoglucomutase Pgm
       SOD_c18180 prs; ribose-phosphate pyrophosphokinase Prs
       SOD_c32440 purF; amidophosphoribosyltransferase PurF
       SOD_c02530 purD; phosphoribosylamine--glycine ligase PurD
       SOD_c34540 purN; phosphoribosylglycinamide formyltransferase PurN
       SOD_c26480 purT; phosphoribosylglycinamide formyltransferase 2
       SOD_c35840 purL; phosphoribosylformylglycinamidine synthase PurL
       SOD_c34530 purM; phosphoribosylformylglycinamidine cyclo-ligase PurM
       SOD_c09940 purK; N5-carboxyaminoimidazole ribonucleotide synthase PurK
       SOD_c09950 purE; N5-carboxyaminoimidazole ribonucleotide mutase PurE
       SOD_c34260 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase PurC
       SOD_c18520 purB; adenylosuccinate lyase PurB
       SOD_c02540 purH; bifunctional purine biosynthesis protein PurH
       SOD_c09690 apt; adenine phosphoribosyltransferase Apt
       SOD_c09790 ushA; protein UshA
       SOD_c06920 surE; 5'/3'-nucleotidase SurE
       SOD_c44130 yrfG; GMp/IMp nucleotidase YrfG
       SOD_c09760 gsk; inosine-guanosine kinase Gsk
       SOD_c05340 deoD; purine nucleoside phosphorylase DeoD-type
       SOD_c08770 UpF0345 protein
       SOD_c42040 rihB1; pyrimidine-specific ribonucleoside hydrolase RihB
       SOD_c39510 hpt; hypoxanthine phosphoribosyltransferase Hpt
       SOD_c35300 guaB; inosine-5'-monophosphate dehydrogenase GuaB
       SOD_c35470 ndk; nucleoside diphosphate kinase Ndk
       SOD_c39840 Non-canonical purine NTp pyrophosphatase
       SOD_c08180 gpt; xanthine phosphoribosyltransferase Gpt
       SOD_c21280 xdhB; xanthine dehydrogenase FAD-binding subunit XdhB
       SOD_c21290 xdhA1; xanthine dehydrogenase molybdenum-binding subunit XdhA
       SOD_c41210 glutamine amidotransferase class-I
       SOD_c24290 yfeJ; glutamine amidotransferase-like protein YfeJ
       SOD_c35290 guaA; GMp synthase [glutamine-hydrolyzing] GuaA
       SOD_c06410 guaC; GMp reductase GuaC
       SOD_c21270 guaD; guanine deaminase GuaD
       SOD_c46670 gmk; guanylate kinase Gmk
       SOD_c20010 pykF; pyruvate kinase I
       SOD_c26110 pykA; pyruvate kinase II
       SOD_c36930 nrdE2; ribonucleoside-diphosphate reductase subunit alpha 2
       SOD_c31880 nrdA; ribonucleoside-diphosphate reductase 1 subunit alpha
       SOD_c31890 nrdB; ribonucleoside-diphosphate reductase 1 subunit beta
       SOD_c36940 nrdF; ribonucleoside-diphosphate reductase 2 subunit beta
       SOD_c04060 nrdD; anaerobic ribonucleoside-triphosphate reductase NrdD
       SOD_c06540 dgt1; deoxyguanosinetriphosphate triphosphohydrolase Dgt
       SOD_c46690 spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
       SOD_c01130 gppA; guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase
       SOD_c34650 ppx; exopolyphosphatase Ppx
       SOD_c06660 relA; GTp pyrophosphokinase RelA
       SOD_c01380 cya; adenylate cyclase Cya
       SOD_c11230 cpdP; putative 3',5'-cyclic-nucleotide phosphodiesterase
       SOD_c03090 purA; adenylosuccinate synthetase PurA
       SOD_c20810 add; adenosine deaminase Add
       SOD_c29480 amn; AMp nucleosidase Amn
       SOD_c37660 ygdH; LOG family protein YgdH
       SOD_c03270 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase
       SOD_c11410 yfkN; trifunctional nucleotide phosphoesterase protein YfkN
       SOD_c09740 adk; adenylate kinase Adk
       SOD_c40790 cpdA; 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA
       SOD_c05880 apaH; Bis(5'-nucleosyl)-tetraphosphatase, symmetrical
       SOD_c06860 cysC; adenylyl-sulfate kinase CysC
       SOD_c06670 mazG; nucleoside triphosphate pyrophosphohydrolase MazG
       SOD_c06850 cysN; sulfate adenylyltransferase subunit 1
       SOD_c06840 cysD; sulfate adenylyltransferase subunit 2
       SOD_c21490 hpxO; FAD-dependent urate hydroxylase HpxO
       SOD_c07930 hiuH; 5-hydroxyisourate hydrolase HiuH
       SOD_c07920 putative urate oxidase subunit
       SOD_c07720 hyuE; hydantoin racemase HyuE
       SOD_c07730 hypothetical protein
       SOD_c07910 hyuC; hydantoin utilization protein C
       SOD_c07900 pucG; purine catabolism protein PucG
       SOD_c07820 atzE; biuret hydrolase AtzE
       SOD_c07840 ywrD; gamma-glutamyltransferase YwrD
K01515 nudF; ADP-ribose pyrophosphatase [EC:3.6.1.13]
K08312 nudE; ADP-ribose diphosphatase [EC:3.6.1.-]
K01839 deoB; phosphopentomutase [EC:5.4.2.7]
K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:2.1.2.2]
K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
K03787 surE; 5'-nucleotidase [EC:3.1.3.5]
K20881 yrfG; 5'-nucleotidase [EC:3.1.3.5]
K00892 gsk; inosine kinase [EC:2.7.1.73]
K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
K01239 iunH; purine nucleosidase [EC:3.2.2.1]
K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
K02428 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
K00364 E1.7.1.7; GMP reductase [EC:1.7.1.7]
K01487 E3.5.4.3; guanine deaminase [EC:3.5.4.3]
K00942 E2.7.4.8; guanylate kinase [EC:2.7.4.8]
K00873 PK; pyruvate kinase [EC:2.7.1.40]
K00873 PK; pyruvate kinase [EC:2.7.1.40]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
K01129 dgt; dGTPase [EC:3.1.5.1]
K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
K01120 cpdP; 3',5'-cyclic-nucleotide phosphodiesterase [EC:3.1.4.17]
K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
K01488 add; adenosine deaminase [EC:3.5.4.4]
K01241 amn; AMP nucleosidase [EC:3.2.2.4]
K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
K00939 adk; adenylate kinase [EC:2.7.4.3]
K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
K16839 hpxO; FAD-dependent urate hydroxylase [EC:1.14.13.113]
K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
K16840 hpxQ; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]
K16841 hpxA; allantoin racemase [EC:5.1.99.3]
K16842 hpxB; allantoinase [EC:3.5.2.5]
K02083 allC; allantoate deiminase [EC:3.5.3.9]
K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
K22601 hpxY; oxamate carbamoyltransferase [EC:2.1.3.5]
K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
     00240 Pyrimidine metabolism [PATH:srl00240]
       SOD_c05800 carB; carbamoyl-phosphate synthase large chain
       SOD_c05790 carA; carbamoyl-phosphate synthase small chain
       SOD_c04280 pyrB; aspartate carbamoyltransferase PyrB
       SOD_c04270 pyrI; aspartate carbamoyltransferase regulatory chain
       SOD_c17230 pyrC; dihydroorotase PyrC
       SOD_c41840 dihydroorotase
       SOD_c16050 pyrD; dihydroorotate dehydrogenase PyrD
       SOD_c46580 pyrE; orotate phosphoribosyltransferase PyrE
       SOD_c24990 pyrF; orotidine 5'-phosphate decarboxylase PyrF
       SOD_c37530 pyrH; uridylate kinase PyrH
       SOD_c35470 ndk; nucleoside diphosphate kinase Ndk
       SOD_c06680 pyrG1; CTp synthase PyrG
       SOD_c15740 cmk; cytidylate kinase Cmk
       SOD_c14460 dcd; deoxycytidine triphosphate deaminase Dcd
       SOD_c14450 udk; uridine kinase Udk
       SOD_c09790 ushA; protein UshA
       SOD_c06920 surE; 5'/3'-nucleotidase SurE
       SOD_c44130 yrfG; GMp/IMp nucleotidase YrfG
       SOD_c01960 udp; uridine phosphorylase Udp
       SOD_c34520 upp; uracil phosphoribosyltransferase Upp
       SOD_c24190 amaB; N-carbamoyl-L-amino acid hydrolase AmaB
       SOD_c16480 rutA; pyrimidine monooxygenase RutA
       SOD_c16440 rutF; FMN reductase (NADH) RutF
       SOD_c16470 rutB; peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
       SOD_c16460 rutC; aminoacrylate peracid reductase RutC
       SOD_c16450 rutD; aminoacrylate hydrolase RutD
       SOD_c21150 ydfG1; NADp-dependent L-serine/L-allo-threonine dehydrogenase YdfG
       SOD_c08770 UpF0345 protein
       SOD_c37660 ygdH; LOG family protein YgdH
       SOD_c43940 codA; cytosine deaminase CodA
       SOD_c30640 codA1; cytosine deaminase CodA
       SOD_c06670 mazG; nucleoside triphosphate pyrophosphohydrolase MazG
       SOD_c04060 nrdD; anaerobic ribonucleoside-triphosphate reductase NrdD
       SOD_c36930 nrdE2; ribonucleoside-diphosphate reductase subunit alpha 2
       SOD_c31880 nrdA; ribonucleoside-diphosphate reductase 1 subunit alpha
       SOD_c31890 nrdB; ribonucleoside-diphosphate reductase 1 subunit beta
       SOD_c36940 nrdF; ribonucleoside-diphosphate reductase 2 subunit beta
       SOD_c46560 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
       SOD_c37870 thyA; thymidylate synthase ThyA
       SOD_c14370 cdd; cytidine deaminase Cdd
       SOD_c05320 deoA; thymidine phosphorylase DeoA
       SOD_c05340 deoD; purine nucleoside phosphorylase DeoD-type
       SOD_c32270 UpF0207 protein
       SOD_c25460 tdk; thymidine kinase Tdk
       SOD_c17390 tmk; thymidylate kinase Tmk
       SOD_c03270 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase
       SOD_c11410 yfkN; trifunctional nucleotide phosphoesterase protein YfkN
       SOD_c18070 psuK; pseudouridine kinase PsuK
       SOD_c18080 psuG2; pseudouridine-5'-phosphate glycosidase 2
K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
K01465 URA4; dihydroorotase [EC:3.5.2.3]
K01465 URA4; dihydroorotase [EC:3.5.2.3]
K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
K09903 pyrH; uridylate kinase [EC:2.7.4.22]
K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
K01937 pyrG; CTP synthase [EC:6.3.4.2]
K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
K01494 dcd; dCTP deaminase [EC:3.5.4.13]
K00876 udk; uridine kinase [EC:2.7.1.48]
K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
K03787 surE; 5'-nucleotidase [EC:3.1.3.5]
K20881 yrfG; 5'-nucleotidase [EC:3.1.3.5]
K00757 udp; uridine phosphorylase [EC:2.4.2.3]
K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
K09018 rutA; pyrimidine oxygenase [EC:1.14.99.46]
K09024 rutF; flavin reductase [EC:1.5.1.-]
K09020 rutB; ureidoacrylate peracid hydrolase [EC:3.5.1.110]
K09021 rutC; aminoacrylate peracid reductase
K09023 rutD; aminoacrylate hydrolase [EC:3.5.1.-]
K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K01520 dut; dUTP pyrophosphatase [EC:3.6.1.23]
K00560 thyA; thymidylate synthase [EC:2.1.1.45]
K01489 cdd; cytidine deaminase [EC:3.5.4.5]
K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
K00857 tdk; thymidine kinase [EC:2.7.1.21]
K00943 tmk; dTMP kinase [EC:2.7.4.9]
K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
K16328 psuK; pseudouridine kinase [EC:2.7.1.83]
K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
 
   09105 Amino acid metabolism
 
   09106 Metabolism of other amino acids
 
   09107 Glycan biosynthesis and metabolism
 
   09108 Metabolism of cofactors and vitamins
 
   09109 Metabolism of terpenoids and polyketides
 
   09110 Biosynthesis of other secondary metabolites
 
   09111 Xenobiotics biodegradation and metabolism
 
   09112 Not included in regular maps
 
 09120 Genetic Information Processing
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:srl03000]
     03021 Transcription machinery [BR:srl03021]
     03019 Messenger RNA biogenesis [BR:srl03019]
     03041 Spliceosome
     03011 Ribosome [BR:srl03011]
     03009 Ribosome biogenesis [BR:srl03009]
     03016 Transfer RNA biogenesis [BR:srl03016]
     03012 Translation factors [BR:srl03012]
     03110 Chaperones and folding catalysts [BR:srl03110]
     04131 Membrane trafficking [BR:srl04131]
       SOD_c35470 ndk; nucleoside diphosphate kinase Ndk
       SOD_c25690 gapA; glyceraldehyde-3-phosphate dehydrogenase GapA
       SOD_c29380 gap1; glyceraldehyde-3-phosphate dehydrogenase 1
       SOD_c11630 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
       SOD_c20010 pykF; pyruvate kinase I
       SOD_c26110 pykA; pyruvate kinase II
       SOD_c09730 htpG; chaperone protein HtpG
K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]
K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]
K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
K00873 PK; pyruvate kinase [EC:2.7.1.40]
K00873 PK; pyruvate kinase [EC:2.7.1.40]
K04079 HSP90A; molecular chaperone HtpG
     04121 Ubiquitin system [BR:srl04121]
     03051 Proteasome [BR:srl03051]
     03032 DNA replication proteins [BR:srl03032]
     03036 Chromosome and associated proteins [BR:srl03036]
     03400 DNA repair and recombination proteins [BR:srl03400]
     03029 Mitochondrial biogenesis [BR:srl03029]
 
   09183 Protein families: signaling and cellular processes
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: January 25, 2020