Transcription Factors - Sus scrofa (pig)

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     KO
 Eukaryotic type
   Basic leucine zipper (bZIP)
   Basic helix-loop-helix (bHLH)
     Ubiquitous (class A) factors
     Myogenic transcription factors
     Achaete-Scute
     Tal/Twist/Atonal/Hen, Lymphoid factors
     Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
     Tal/Twist/Atonal/Hen, HEN
     Tal/Twist/Atonal/Hen, Mesp
     Tal/Twist/Atonal/Hen, Atonal
     Tal/Twist/Atonal/Hen, Pancreatic factors
     Hairy, Hairy/E(SPL)
     Hairy, Fungal regulators
     Factors with PAS domain
       396654 AHR; aryl hydrocarbon receptor
       100624847 AHRR; aryl hydrocarbon receptor repressor isoform X1
       396696 HIF1A; hypoxia-inducible factor 1-alpha
       100037272 EPAS1; endothelial PAS domain-containing protein 1
       100621574 HIF3A; hypoxia-inducible factor 3-alpha isoform X1
       396653 ARNT; aryl hydrocarbon receptor nuclear translocator
       100157219 ARNT2; aryl hydrocarbon receptor nuclear translocator 2 isoform X3
       100517221 NPAS1; neuronal PAS domain-containing protein 1 isoform X1
       100621114 NPAS3; LOW QUALITY PROTEIN: neuronal PAS domain-containing protein 3
       100521893 NPAS2; neuronal PAS domain-containing protein 2
       100628097 CLOCK; circadian locomoter output cycles protein kaput isoform X1
       100037286 ARNTL; aryl hydrocarbon receptor nuclear translocator-like protein 1
       100625791 ARNTL2; aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform X1
       100154026 SIM1; single-minded homolog 1
       100623917 SIM2; single-minded homolog 2 isoform X1
K09093 AHR; aryl hydrocarbon receptor 
K09094 AHRR; aryl hydrocarbon receptor repressor 
K08268 HIF1A; hypoxia-inducible factor 1 alpha 
K09095 HIF2A; hypoxia-inducible factor 2 alpha 
K09096 HIF3A; hypoxia-inducible factor 3 alpha 
K09097 ARNT; aryl hydrocarbon receptor nuclear translocator 
K15589 ARNT2; aryl hydrocarbon receptor nuclear translocator 2 
K09098 NPAS1_3; neuronal PAS domain-containing protein 1/3 
K09098 NPAS1_3; neuronal PAS domain-containing protein 1/3 
K09026 NPAS2; neuronal PAS domain-containing protein 2 
K02223 CLOCK; circadian locomoter output cycles kaput protein [EC:2.3.1.48] 
K02296 ARNTL; aryl hydrocarbon receptor nuclear translocator-like protein 1 
K09099 ARNTL2; aryl hydrocarbon receptor nuclear translocator-like protein 2 
K09100 SIM; single-minded 
K09100 SIM; single-minded 
     INO
     HLH domain only
   Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
   Other basic domains
   Zinc finger
   Helix-turn-helix
   beta-Scaffold factors with minor groove contacts
   Other transcription factors
 
 Prokaryotic type

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Last updated: June 1, 2020
Classification taken and modified from TRANSFAC 7.0