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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:ssut03030]
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03410 Base excision repair [PATH:ssut03410]
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 TL13_1000 nth; Endonuclease III
TL13_0919 ung; Uracil-DNA glycosylase, family 1
TL13_0888 mutY; A/G-specific adenine glycosylase
TL13_0581 Formamidopyrimidine-DNA glycosylase
TL13_0075 tag; DNA-3-methyladenine glycosylase
TL13_1107 exoC; Exodeoxyribonuclease III
TL13_0621 polA; DNA polymerase I
TL13_0687 recJ; Single-stranded-DNA-specific exonuclease RecJ
TL13_0786 ligA; DNA ligase
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K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03420 Nucleotide excision repair [PATH:ssut03420]
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03430 Mismatch repair [PATH:ssut03430]
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03440 Homologous recombination [PATH:ssut03440]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:ssut03000]
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03021 Transcription machinery [BR:ssut03021]
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03019 Messenger RNA biogenesis [BR:ssut03019]
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03041 Spliceosome
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03011 Ribosome [BR:ssut03011]
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03009 Ribosome biogenesis [BR:ssut03009]
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03016 Transfer RNA biogenesis [BR:ssut03016]
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03012 Translation factors [BR:ssut03012]
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03110 Chaperones and folding catalysts [BR:ssut03110]
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04131 Membrane trafficking [BR:ssut04131]
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04121 Ubiquitin system
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03051 Proteasome
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03032 DNA replication proteins [BR:ssut03032]
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03036 Chromosome and associated proteins [BR:ssut03036]
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03400 DNA repair and recombination proteins [BR:ssut03400]
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TL13_1110 ogt; Methylated-DNA--protein-cysteine methyltransferase
TL13_0919 ung; Uracil-DNA glycosylase, family 1
TL13_0888 mutY; A/G-specific adenine glycosylase
TL13_1000 nth; Endonuclease III
TL13_0905 NTP pyrophosphohydrolase
TL13_0818 mutT; Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase)
TL13_1813 NTP pyrophosphohydrolase
TL13_0516 mutT; Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase)
TL13_1837 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase
TL13_0075 tag; DNA-3-methyladenine glycosylase
TL13_0581 Formamidopyrimidine-DNA glycosylase
TL13_1107 exoC; Exodeoxyribonuclease III
TL13_0687 recJ; Single-stranded-DNA-specific exonuclease RecJ
TL13_0786 ligA; DNA ligase
TL13_0621 polA; DNA polymerase I
TL13_1614 uvrA; Excinuclease ABC subunit A
TL13_0897 uvrB; Excinuclease ABC subunit B
TL13_1061 uvrD; ATP-dependent DNA helicase UvrD/PcrA
TL13_0151 rpoB; DNA-directed RNA polymerase beta subunit
TL13_0152 rpoC; DNA-directed RNA polymerase beta' subunit
TL13_0110 rpoA; DNA-directed RNA polymerase alpha subunit
TL13_0370 rpoE; DNA-directed RNA polymerase delta subunit
TL13_0446 rpoZ; DNA-directed RNA polymerase omega subunit
TL13_0008 trcF; Transcription-repair coupling factor
TL13_1923 mutS; DNA mismatch repair protein MutS
TL13_0265 mutS; Recombination inhibitory protein MutS2
TL13_0073 mutL; DNA mismatch repair protein MutL
TL13_1452 xseA; Exodeoxyribonuclease VII large subunit
TL13_1451 xseB; Exodeoxyribonuclease VII small subunit
TL13_1229 dnaE; DNA polymerase III alpha subunit
TL13_1758 polC; DNA polymerase III alpha subunit
TL13_0002 dnaN; DNA polymerase III beta subunit
TL13_1349 holA; DNA polymerase III delta subunit
TL13_1117 holB; DNA polymerase III delta prime subunit
TL13_1429 dnaH; DNA polymerase III subunits gamma and tau
TL13_1622 ssb; Single-stranded DNA-binding protein
TL13_0189 ssb; Single-stranded DNA-binding protein
TL13_0254 yrrC; RecD-like DNA helicase YrrC
TL13_0077 recA; RecA protein
TL13_0074 ruvA; Holliday junction DNA helicase RuvA
TL13_0066 ruvB; Holliday junction DNA helicase RuvB
TL13_0447 priA; Helicase PriA essential for oriC/DnaA-independent DNA replication
TL13_1835 sms; DNA repair protein RadA
TL13_1984 recF; DNA recombination and repair protein RecF
TL13_0381 recG; ATP-dependent DNA helicase RecG
TL13_0177 divergent AAA domain protein
TL13_0042 recO; DNA recombination and repair protein RecO
TL13_0645 recR; Recombination protein RecR
TL13_1447 recN; DNA repair protein RecN
TL13_0437 recU; Recombination protein RecU
TL13_1047 addA; ATP-dependent nuclease, subunit A
TL13_1048 addB; ATP-dependent nuclease, subunit B
TL13_0296 ATPase
TL13_0871 gyrA; DNA gyrase subunit A
TL13_1336 gyrB; DNA gyrase subunit B
TL13_0932 topA; DNA topoisomerase I
TL13_1443 DNA-binding protein HBsu
TL13_0249 dinB; DNA polymerase IV
TL13_0476 recX; Regulatory protein recX
TL13_1216 yoaA; DinG family ATP-dependent helicase YoaA
TL13_0763 Ribonucleotide reductase of class Ib (aerobic), alpha subunit
TL13_0762 nrdF; Ribonucleotide reductase of class Ib (aerobic), beta subunit
TL13_1341 3'-to-5' oligoribonuclease A
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03700 recU; recombination protein U
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:ssut03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Streptococcus suis TL13 (serotype 16)