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09100 Metabolism
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09101 Carbohydrate metabolism
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09102 Energy metabolism
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09103 Lipid metabolism
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09104 Nucleotide metabolism
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09105 Amino acid metabolism
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09106 Metabolism of other amino acids
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09107 Glycan biosynthesis and metabolism
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09108 Metabolism of cofactors and vitamins
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00730 Thiamine metabolism [PATH:stm00730]
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00740 Riboflavin metabolism [PATH:stm00740]
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00750 Vitamin B6 metabolism [PATH:stm00750]
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00760 Nicotinate and nicotinamide metabolism [PATH:stm00760]
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00770 Pantothenate and CoA biosynthesis [PATH:stm00770]
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00780 Biotin metabolism [PATH:stm00780]
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00785 Lipoic acid metabolism [PATH:stm00785]
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00790 Folate biosynthesis [PATH:stm00790]
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STM2193 folE; GTP cyclohydrolase I FolE
STM1900 ntpA; dihydroneopterin triphosphate diphosphatase
STM3206 folB; dihydroneopterin aldolase
STM0183 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase
STM3295 folP; dihydropteroate synthase
STM0087 folA; dihydrofolate reductase
STM2365 folC; bifunctional tetrahydrofolate synthase/dihydrofolate synthase
STM1711 ribA; GTP cyclohydrolase II
STM3469 pabA; aminodeoxychorismate synthase component II
STM1824 pabB; p-aminobenzoate synthetase, component I
STM1198 pabC; aminodeoxychorismate lyase
STM2949 ptpS; 6-carboxytetrahydropterin synthase QueD
STM2951 ygcF; 7-carboxy-7-deazaguanine synthase QueE
STM0455 ybaX; 7-cyano-7-deazaguanine synthase QueC
STM2968 yqcD; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF
STM2950 MBL fold metallo-hydrolase
STM0802 moaA; cyclic pyranopterin phosphate synthase
STM0804 moaC; molybdenum cofactor biosynthesis protein C
STM0806 moaE; molybdenum cofactor biosynthesis protein MoaE
STM0008 mog; molybdopterin adenylyltransferase
STM0803 moaB; molybdenum cofactor biosynthesis protein B
STM0846 moeA; molybdopterin biosynthesis protein
STM3994 mobA; molybdenum cofactor guanylyltransferase MobA
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K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
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00670 One carbon pool by folate [PATH:stm00670]
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00830 Retinol metabolism
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00860 Porphyrin metabolism [PATH:stm00860]
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00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:stm00130]
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09109 Metabolism of terpenoids and polyketides
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09110 Biosynthesis of other secondary metabolites
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09111 Xenobiotics biodegradation and metabolism
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09112 Not included in regular maps
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09120 Genetic Information Processing
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:stm03000]
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03021 Transcription machinery [BR:stm03021]
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03019 Messenger RNA biogenesis [BR:stm03019]
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03041 Spliceosome
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03011 Ribosome [BR:stm03011]
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03009 Ribosome biogenesis [BR:stm03009]
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03016 Transfer RNA biogenesis [BR:stm03016]
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STM2313 elaC; ribonuclease Z
STM3204 cca; multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase
STM3519 rtcB; putative cytoplasmic protein
STM2415 gltX; glutamate--tRNA ligase
STM0242 proS; proline--tRNA ligase
STM0046 ileS; isoleucine--tRNA ligase
STM0648 leuS; leucine tRNA synthetase
STM2155 metG; methionine--tRNA ligase
STM0686 glnS; glutamine--tRNA ligase
STM1909 argS; arginine--tRNA ligase
STM3040 lysS; lysine--tRNA ligase
STM1901 aspS; aspartate--tRNA ligase
STM2827 alaS; alanine--tRNA ligase
STM1000 asnS; asparagine--tRNA ligase
STM1333 thrS; threonine--tRNA ligase
STM0963 serS; serine--tRNA ligase
STM0537 cysS; cysteine tRNA synthetase
STM4475 valS; valine--tRNA ligase
STM2522 hisS; histidine--tRNA ligase
STM1337 pheS; phenylalanine--tRNA ligase subunit alpha
STM1338 pheT; phenylalanine--tRNA ligase subunit beta
STM1449 tyrS; tyrosine--tRNA ligase
STM3481 trpS; tryptophan--tRNA ligase
STM4508 trpS2; tryptophan--tRNA ligase
STM4028 yihZ; D-tyrosyl-tRNA(Tyr) deacylase
STM1205 ycfF; histidine triad nucleotide-binding protein
STM3109 yggH; tRNA (guanosine(46)-N7)-methyltransferase TrmB
STM0243 yaeB; tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
STM2368 truA; tRNA pseudouridine(38-40) synthase TruA
STM3284 truB; tRNA pseudouridine(55) synthase TruB
STM2928 ygbO; tRNA pseudouridine(13) synthase TruD
STM2543 nifS; IscS subfamily cysteine desulfurase
STM3402 yrdC; L-threonylcarbamoyladenylate synthase type 1 TsaC
STM4360 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
STM3843 trmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
STM3874 gidA; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
STM1297 selD; selenophosphate synthase
STM4404 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ
STM3840 rnpA; ribonuclease P protein component
STM3246 rnpB; regulatory RNA
STM1434 rnt; ribonuclease T
STM3734 rph; ribonuclease PH
STM0617 rna; ribonuclease I
STM1702 rnb; exoribonuclease II
STM1817 rnd; RNase D
STM0188 ligT; 2'-5' RNA ligase
STM4581 yjjK; energy-dependent translational throttle protein EttA
STM3656 glyQ; glycine--tRNA ligase subunit alpha
STM3655 glyS; glycine--tRNA ligase subunit beta
STM0185 yadB; putative glutamyl t-RNA synthetase
STM0495 ybaK; aminoacyl-tRNA deacylase
STM1282 yeaK; putative cytoplasmic protein
STM2568 yfhC; tRNA adenosine(34) deaminase TadA
STM4243 yjbN; tRNA dihydrouridine(20/20a) synthase DusA
STM3384 yhdG; tRNA dihydrouridine synthase DusB
STM2174 yohI; tRNA dihydrouridine(16) synthase DusC
STM0670 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
STM1905 yecO; carboxy-S-adenosyl-L-methionine synthase CmoA
STM1906 yecP; tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
STM0991 smtA; tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM
STM4600 lasT; tRNA/rRNA methyltransferase
STM4129 trmA; tRNA (uridine(54)-C5)-methyltransferase TrmA
STM2674 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD
STM2648 yfiF; putative tRNA/rRNA methyltransferase
STM3743 spoU; tRNA (guanosine(18)-2'-O)-methyltransferase TrmH
STM2545 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ
STM3695 yibK; tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL
STM2642 yfiC; tRNA (adenosine(37)-N6)-methyltransferase TrmM
STM2964 yqcB; tRNA pseudouridine(65) synthase TruC
STM0095 rluA; bifunctional tRNA pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase RluA
STM1234 trmU; tRNA 2-thiouridine(34) synthase MnmA
STM1654 ydaO; tRNA 2-thiocytidine(32) synthetase TtcA
STM3578 yhhP; sulfurtransferase TusA
STM3449 yheL; sulfurtransferase TusB
STM3450 yheM; sulfurtransferase TusC
STM3451 yheN; sulfurtransferase TusD
STM1084 yccK; sulfurtransferase TusE
STM2541 yfhF; iron-sulfur cluster assembly protein IscA
STM3048 ygfZ; tRNA-modifying protein YgfZ
STM4471 miaE; tRNA 2-methylthio-N6-isopentenyl adenosine(37) hydroxylase MiaE
STM2379 putative peptidase
STM0404 queA; S-adenosylmethionine-tRNA ribosyltransferase-isomerase
STM0455 ybaX; 7-cyano-7-deazaguanine synthase QueC
STM2949 ptpS; 6-carboxytetrahydropterin synthase QueD
STM2951 ygcF; 7-carboxy-7-deazaguanine synthase QueE
STM2968 yqcD; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF
STM4355 yjeS; putative Fe-S protein
STM0513 ybbB; tRNA 2-selenouridine(34) synthase MnmH
STM0405 tgt; tRNA guanosine(34) transglycosylase Tgt
STM0425 thiI; tRNA 4-thiouridine(8) synthase ThiI
STM0236 mesJ; tRNA lysidine(34) synthetase TilS
STM2485 ypfI; tRNA cytosine(34) acetyltransferase TmcA
STM1820 yeaZ; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
STM3208 gcp; tRNA threonylcarbamoyl adenosine modification protein TsaD
STM4357 yjeE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
STM2987 ygdL; tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
STM4368 vacB; ribonuclease R
STM3282 pnp; polyribonucleotide nucleotidyltransferase
PSLT106 homologue of mvpA, Shigella flexneri
STM3033 VapC toxin family PIN domain ribonuclease
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K00784 rnz; ribonuclease Z [EC:3.1.26.11]
K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
K01008 selD; selenide, water dikinase [EC:2.7.9.3]
K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
K01978 rnpB; M1 RNA
K03683 rnt; ribonuclease T [EC:3.1.13.-]
K00989 rph; ribonuclease PH [EC:2.7.7.56]
K01169 rna; ribonuclease I (enterobacter ribonuclease) [EC:4.6.1.21]
K01147 rnb; exoribonuclease II [EC:3.1.13.1]
K03684 rnd; ribonuclease D [EC:3.1.13.5]
K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
K06020 ettA; energy-dependent translational throttle protein EttA
K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
K07237 tusB; tRNA 2-thiouridine synthesizing protein B
K07236 tusC; tRNA 2-thiouridine synthesizing protein C
K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
K13628 iscA; iron-sulfur cluster assembly protein
K06980 ygfZ; tRNA-modifying protein YgfZ
K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
K12573 rnr; ribonuclease R [EC:3.1.13.1]
K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
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03012 Translation factors [BR:stm03012]
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03110 Chaperones and folding catalysts [BR:stm03110]
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04131 Membrane trafficking [BR:stm04131]
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04121 Ubiquitin system [BR:stm04121]
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03051 Proteasome [BR:stm03051]
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03032 DNA replication proteins [BR:stm03032]
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03036 Chromosome and associated proteins [BR:stm03036]
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03400 DNA repair and recombination proteins [BR:stm03400]
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03029 Mitochondrial biogenesis [BR:stm03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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