KEGG Orthology (KO) - Treponema succinifaciens

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:tsu03000]
     03021 Transcription machinery [BR:tsu03021]
     03019 Messenger RNA biogenesis [BR:tsu03019]
     03041 Spliceosome [BR:tsu03041]
     03011 Ribosome [BR:tsu03011]
     03009 Ribosome biogenesis [BR:tsu03009]
       Tresu_0151 ribonuclease III
       Tresu_1215 Ribonuclease 3
       Tresu_2134 GTP-binding protein Era-like-protein
       Tresu_0894 GTPase obg
       Tresu_2416 transcriptional regulator, TraR/DksA family
       Tresu_2092 NusA antitermination factor
       Tresu_0463 NusB antitermination factor
       Tresu_2466 NusG antitermination factor
       Tresu_0446 pseudouridine synthase Rsu
       Tresu_0827 pseudouridine synthase Rsu
       Tresu_1274 Ribosomal RNA small subunit methyltransferase A
       Tresu_1363 methyltransferase
       Tresu_0065 Ribosomal RNA small subunit methyltransferase E
       Tresu_2503 Ribosomal RNA small subunit methyltransferase E
       Tresu_0060 Ribosomal RNA small subunit methyltransferase G
       Tresu_1598 Ribosomal RNA small subunit methyltransferase H
       Tresu_2408 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
       Tresu_2522 Ribosomal RNA small subunit methyltransferase I
       Tresu_2396 RNA methyltransferase, TrmH family, group 3
       Tresu_2210 Ribosomal RNA large subunit methyltransferase E
       Tresu_1660 protein of unknown function Met10
       Tresu_1802 protein of unknown function DUF519
       Tresu_1228 rRNA (guanine-N(2)-)-methyltransferase
       Tresu_2053 hypothetical protein
       Tresu_1936 radical SAM enzyme, Cfr family
       Tresu_1366 Ribosomal RNA large subunit methyltransferase N
       Tresu_1224 (Uracil-5)-methyltransferase
       Tresu_2136 pseudouridine synthase
       Tresu_1807 RNA-binding S4 domain protein
       Tresu_1605 pseudouridine synthase
       Tresu_2507 pseudouridine synthase
       Tresu_1270 pseudouridine synthase
       Tresu_1271 pseudouridine synthase, RluA family
       Tresu_1797 pseudouridine synthase, RluA family
       Tresu_0011 GCN5-related N-acetyltransferase
       Tresu_0993 Ribosome maturation factor rimM
       Tresu_0296 RNA modification enzyme, MiaB family
       Tresu_1883 DEAD/DEAH box helicase domain protein
       Tresu_1301 DEAD/DEAH box helicase domain protein
       Tresu_1798 ribosome biogenesis GTPase RsgA
       Tresu_2214 GTP-binding protein engA
       Tresu_0234 GTP-binding proten HflX
       Tresu_1145 Sua5/YciO/YrdC/YwlC family protein
       Tresu_2140 (p)ppGpp synthetase I, SpoT/RelA
       Tresu_2090 Ribosome-binding factor A
       Tresu_2093 protein of unknown function DUF150
       Tresu_0898 iojap-like protein
       Tresu_1664 metalloprotease ybeY
       Tresu_0015 protein of unknown function UPF0044
       Tresu_2135 GTP-binding protein YchF
K03685 rnc; ribonuclease III [EC:3.1.26.3]
K03685 rnc; ribonuclease III [EC:3.1.26.3]
K03595 era; GTPase
K03979 obgE; GTPase [EC:3.6.5.-]
K06204 dksA; RNA polymerase-binding transcription factor
K02600 nusA; transcription termination/antitermination protein NusA
K03625 nusB; transcription antitermination protein NusB
K02601 nusG; transcription termination/antitermination protein NusG
K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
K25136 rlmK; 23S rRNA (guanine2069-N7)-methyltransferase [EC:2.1.1.264]
K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
K02860 rimM; 16S rRNA processing protein RimM
K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
K05592 deaD; ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
K05592 deaD; ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
K03977 engA; GTPase
K03665 hflX; GTPase
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
K02834 rbfA; ribosome-binding factor A
K09748 rimP; ribosome maturation factor RimP
K09710 ybeB; ribosome-associated protein
K07042 ybeY; probable rRNA maturation factor
K07574 yhbY; RNA-binding protein
K06942 ychF; ribosome-binding ATPase
     03016 Transfer RNA biogenesis [BR:tsu03016]
     03012 Translation factors [BR:tsu03012]
     03110 Chaperones and folding catalysts [BR:tsu03110]
     04131 Membrane trafficking [BR:tsu04131]
     04121 Ubiquitin system
     03051 Proteasome [BR:tsu03051]
     03032 DNA replication proteins [BR:tsu03032]
     03036 Chromosome and associated proteins [BR:tsu03036]
     03400 DNA repair and recombination proteins [BR:tsu03400]
     03029 Mitochondrial biogenesis [BR:tsu03029]
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: April 22, 2024