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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:xcv03030]
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03410 Base excision repair [PATH:xcv03410]
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03420 Nucleotide excision repair [PATH:xcv03420]
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03430 Mismatch repair [PATH:xcv03430]
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 XCV1352 mutS; DNA mismatch repair protein
XCV2602 mutL; DNA mismatch repair protein MutL
XCV4248 uvrD; DNA helicase II
XCV0225 hypothetical protein
XCV1640 sbcB; exodeoxyribonuclease I
XCV2607 xseA; exodeoxyribonuclease VII large subunit
XCV2915 xseB; exodeoxyribonuclease VII small subunit
XCV1912 putative single-stranded-DNA-specific exonuclease
XCV3049 single-stranded DNA binding protein
XCVd0129 ssb; Single-stranded DNA-binding protein
XCV2407 single-stranded DNA binding protein
XCV2288 single-stranded DNA binding protein
XCV1463 dnaE2; DNA polymerase III alpha chain
XCV0002 dnaN; DNA polymerase III beta chain
XCV1127 dnaX; DNA polymerase III tau and gamma subunits
XCV2935 holA; DNA polymerase III delta subunit
XCV1151 holB; DNA polymerase III delta' subunit
XCV1090 dnaQ; DNA polymerase III epsilon chain
XCV3683 holC; DNA polymerase III holoenzyme chi subunit
XCV1668 ligA; DNA ligase
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K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03440 Homologous recombination [PATH:xcv03440]
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03450 Non-homologous end-joining [PATH:xcv03450]
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:xcv03000]
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03021 Transcription machinery [BR:xcv03021]
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03019 Messenger RNA biogenesis [BR:xcv03019]
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03041 Spliceosome
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03011 Ribosome [BR:xcv03011]
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03009 Ribosome biogenesis [BR:xcv03009]
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03016 Transfer RNA biogenesis [BR:xcv03016]
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03012 Translation factors [BR:xcv03012]
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03110 Chaperones and folding catalysts [BR:xcv03110]
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04131 Membrane trafficking [BR:xcv04131]
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04121 Ubiquitin system [BR:xcv04121]
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03051 Proteasome [BR:xcv03051]
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03032 DNA replication proteins [BR:xcv03032]
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03036 Chromosome and associated proteins [BR:xcv03036]
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03400 DNA repair and recombination proteins [BR:xcv03400]
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XCV2984 ogt; 6-O-methylguanine-DNA methyltransferase
XCV1536 putative photolyase
XCV3950 ung; uracil-DNA glycosylase
XCV2626 3-methyladenine DNA glycosylase
XCV2752 mutY; A/G-specific adenine glycosylase
XCV1623 putative endonuclease III
XCV3473 endonuclease S1
XCV2205 Nudix hydrolase family protein
XCV0840 putative NUDIX hydrolase family / thiamine monophosphate synthase fusionprotein
XCV4026 dut; dUTPase
XCV1385 conserved hypothetical protein
XCV3825 uracil DNA glycosylase superfamily protein
XCV1264 alkA; DNA-3-methyladenine glycosylase
XCV2983 ada; DNA methylation and regulatory protein (methylated-DNA--[protein]-cysteine S-methyltransferase)
XCV2171 DNA-3-methyladenine glycosylase I
XCV3064 tag; DNA-3-methyladenine glycosylase I
XCV4390 mutM; DNA-formamidopyrimidine glycosylase
XCV0662 putative DNA-formamidopyrimidine glycosylase
XCV4270 xthA2; exodeoxyribonuclease III
XCV2081 xthA1; exodeoxyribonuclease III
XCV4015 exoA; exodeoxyribonuclease III
XCV3030 nfi; Deoxyribonuclease V
XCV1912 putative single-stranded-DNA-specific exonuclease
XCV1668 ligA; DNA ligase
XCV4200 polA; DNA-directed DNA polymerase
XCV1213 putative excinuclease ABC subunit A
XCV1283 excinuclease ABC subunit A
XCV2812 uvrB; excinuclease ABC subunit B
XCV2259 uvrC; excinuclease ABC subunit C
XCV1121 Excinuclease subunit
XCV2758 putative excinuclease subunit (fragment)
XCV4248 uvrD; DNA helicase II
XCV0225 hypothetical protein
XCV0991 rpoB; DNA directed RNA polymerase (beta subunit)
XCV0992 rpoC; DNA directed RNA polymerase (beta' subunit)
XCV1023 rpoA; DNA directed RNA polymerase (alpha subunit)
XCV3511 rpoZ; RNA polymerase omega subunit
XCV3018 mfd; transcription-repair coupling factor
XCV1352 mutS; DNA mismatch repair protein
XCV2602 mutL; DNA mismatch repair protein MutL
XCV1640 sbcB; exodeoxyribonuclease I
XCV2607 xseA; exodeoxyribonuclease VII large subunit
XCV2915 xseB; exodeoxyribonuclease VII small subunit
XCV1463 dnaE2; DNA polymerase III alpha chain
XCV0002 dnaN; DNA polymerase III beta chain
XCV3683 holC; DNA polymerase III holoenzyme chi subunit
XCV2935 holA; DNA polymerase III delta subunit
XCV1151 holB; DNA polymerase III delta' subunit
XCV1090 dnaQ; DNA polymerase III epsilon chain
XCV1127 dnaX; DNA polymerase III tau and gamma subunits
XCV3049 single-stranded DNA binding protein
XCVd0129 ssb; Single-stranded DNA-binding protein
XCV2407 single-stranded DNA binding protein
XCV2288 single-stranded DNA binding protein
XCV4442 recB; exodeoxyribonuclease V beta chain
XCV4443 recC; exodeoxyribonuclease V, gamma chain
XCV4441 recD; exodeoxyribonuclease V alpha chain
XCV1773 recA; RecA protein
XCV3280 ruvA; Holliday junction DNA helicase RuvA
XCV3277 ruvB; Holliday junction DNA helicase RuvB
XCV3281 ruvC; holliday junction resolvase
XCV3943 priA; primosomal protein N'
XCV1312 radA; DNA repair protein
XCV0003 recF; DNA replication and repair protein RecF
XCV3508 recG; ATP-dependent DNA helicase
XCV2169 recG; ATP-dependent DNA helicase
XCV1379 putative DNA repair protein
XCV1129 recR; recombination protein RecR
XCV1561 recN; recombination protein N
XCV4327 rdgC; recombination associated protein RdgC
XCVd0134 rdgC; recombination associated protein / putative exonuclease
XCV2882 conserved hypothetical protein
XCV0109 conserved hypothetical protein
XCV2612 lig3; ATP-dependent DNA ligase
XCV1672 gyrA; DNA gyrase subunit A
XCV0004 gyrB; DNA gyrase subunit B
XCV3932 topA; DNA topoisomerase I
XCVd0036 putative DNA topoisomerase
XCV0039 putative DNA topoisomerase I
XCV1084 hupB; histone-like protein
XCV0556 putative transcriptional regulator, Fis family
XCV2789 gumA; Integration host factor alpha subunit
XCV2495 ihfB; Integration host factor beta subunit
XCV3255 recQ; DNA helicase
XCV3693 putative DNA-binding protein
XCV3408 hns3; putative histone-like nucleoid-structuring protein
XCV3740 dinP; DNA polymerase IV
XCV3904 umuD; putative polymerase V subunit
XCV1772 lexA2; LexA repressor
XCV1223 lexA1; LexA repressor
XCV1224 conserved hypothetical protein
XCV1225 conserved hypothetical protein
XCV1226 dnaE1; DNA polymerase III alpha chain protein
XCV1774 recX; regulatory protein RecX
XCV4383 rep; ATP-dependent DNA helicase
XCV4123 dinG; ATP-dependent helicase
XCV3239 yoaA; ATP-dependent helicase
XCV2627 lhr; ATP-dependent DNA helicase Lhr
XCV1393 ATP-dependent helicase
XCV4161 nrdA; ribonucleoside-diphosphate reductase alpha chain
XCV4160 nrdB; ribonucleoside-diphosphate reductase beta chain
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K05986 NUCS; nuclease S1 [EC:3.1.30.1]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K05984 cho; excinuclease Cho [EC:3.1.25.-]
K05984 cho; excinuclease Cho [EC:3.1.25.-]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K03554 rdgC; recombination associated protein RdgC
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14160 imuA; protein ImuA
K14161 imuB; protein ImuB
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03565 recX; regulatory protein
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:xcv03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Xanthomonas campestris pv. vesicatoria