Transcription Factors - Xenopus laevis (African clawed frog)

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     KO 
 Eukaryotic type

   Basic leucine zipper (bZIP)

   Basic helix-loop-helix (bHLH)

   Basic helix-loop-helix/leucine zipper (bHLH-ZIP)

   Other basic domains

   Zinc finger

   Helix-turn-helix

     Homeo domain ANTP: HOXL

     Homeo domain ANTP: NKL

     Homeo domain Paired-related

       446261 arx.L; aristaless related homeobox L homeolog
       108698436 homeobox protein ARX
       108700658 homeobox protein ARX
       378653 arx.S; aristaless related homeobox S homeolog
       108713752 homeobox protein aristaless-like 4
       108715264 homeobox protein aristaless-like 4
       397748 gsc.S; homeobox protein goosecoid isoform B
       397752 gsc.L; homeobox protein goosecoid
       108707124 gsc2.S; homeobox protein goosecoid-2 isoform X1
       394326 otx1.L; orthodenticle homeobox 1 L homeolog
       108717621 otx1.S; homeobox protein OTX1 B isoform X2
       432013 otx2.L; homeobox protein OTX2-B
       399342 otx2.S; homeobox protein OTX2-A
       108716419 homeobox protein prophet of Pit-1
       380334 uncx.L; UNC homeobox L homeolog
       108701562 homeobox protein unc-4 homolog
       108715742 paired mesoderm homeobox protein 1 isoform X1
       108699948 prrx2.S; paired mesoderm homeobox protein 2
       108714489 paired mesoderm homeobox protein 1 isoform X1
       108704692 prrx2.L; paired mesoderm homeobox protein 2 isoform X1
       402788 phox2a.S; paired like homeobox 2A S homeolog
       402787 phox2b.L; paired like homeobox 2B L homeolog
       495120 phox2b.S; paired like homeobox 2B S homeolog
       108710089 paired mesoderm homeobox protein 2A
       108717036 short stature homeobox protein 2 isoform X1
       108718113 shox2.S; short stature homeobox protein 2
       108708445 short stature homeobox protein isoform X1
       108709734 short stature homeobox protein
       397999 rax.L; retinal homeobox protein Rx-B
       734229 rax2.S; retina and anterior neural fold homeobox 2 S homeolog
       397998 rax.S; retinal homeobox protein Rx-A
       101027270 rax2.L; retina and anterior neural fold homeobox 2 L homeolog
       373650 alx1.L; ALX homeobox protein 1
       108713183 alx1.S; ALX homeobox protein 1-like isoform X2
       779073 vsx1.L; visual system homeobox 1
       108717783 vsx1.S; visual system homeobox 1-like
       108700491 vsx2.S; visual system homeobox 2 isoform X1
       108698670 vsx2.L; visual system homeobox 2 isoform X1
       398118 crx.L; homeobox protein otx5-B
       373653 crx.S; homeobox protein otx5-A
       394419 hbox10.S; homeobox-containing protein
       394310 pitx1.L; pituitary homeobox 1
       398033 pitx2.L; paired like homeodomain 2 L homeolog
       373586 pitx2.S; paired like homeodomain 2 S homeolog
       398183 pitx3.L; paired like homeodomain 3 L homeolog
       373824 pitx3.S; pituitary homeobox 3
       397950 hesx1.L; homeobox expressed in ES cells 1-B
       378542 hesx1.S; homeobox expressed in ES cells 1-A
       108714291 dmbx1.L; diencephalon/mesencephalon homeobox protein 1 isoform X1
       108696344 drgx.L; dorsal root ganglia homeobox protein
       108703694 hopx.S; homeodomain-only protein
       108713411 hopx.L; homeodomain-only protein
       100137681 mixer.S; homeobox protein Mix.1-like
       398035 mixer.L; homeobox protein Mix.1-like
       397759 mix1.S; homeobox protein Mix.1
       108717966 otp.L; homeobox protein orthopedia
       108707273 otp.S; homeobox protein orthopedia
       108707964 sebox.L; homeobox protein SEBOX
       779364 pax1.S; paired box 1 S homeolog
       100381067 pax9.L; paired box 9 L homeolog
       108716602 paired box protein Pax-1
       379520 pax2.L; paired box protein Pax-2-A
       108697493 paired box protein Pax-2-B isoform X6
       496378 pax7.L; paired box 7 L homeolog
       496376 pax3.S; paired box protein Pax-3-A
       496377 pax3.L; paired box protein Pax-3-B
       108697868 pax7.S; paired box protein Pax-7 isoform X1
       108710280 LOW QUALITY PROTEIN: paired box protein Pax-4
       378499 pax5.L; paired box protein Pax-5
       108703726 paired box protein Pax-5-like isoform X1
       379100 pax6.L; paired box 6 L homeolog
       108696727 paired box protein Pax-6
       108697776 paired box protein Pax-6
       100337586 pax6.S; paired box protein Pax-6
       398132 pax8.L; paired box protein Pax-8
       108712742 pax8.S; paired box protein Pax-8 isoform X1

K09452 ARX; homeobox protein aristaless-related 
K09452 ARX; homeobox protein aristaless-related 
K09452 ARX; homeobox protein aristaless-related 
K09452 ARX; homeobox protein aristaless-related 
K09451 ALX4; homeobox protein aristaless-like 4 
K09451 ALX4; homeobox protein aristaless-like 4 
K09324 GSC; homeobox protein goosecoid 
K09324 GSC; homeobox protein goosecoid 
K09325 GSCL; homeobox protein goosecoid-like 
K09326 OTX1; homeobox protein OTX1 
K09326 OTX1; homeobox protein OTX1 
K18490 OTX2; homeobox protein OTX2 
K18490 OTX2; homeobox protein OTX2 
K09327 PROP1; homeobox protein prophet of Pit-1 
K09328 UNC4; homeobox protein Unc-4 
K09328 UNC4; homeobox protein Unc-4 
K09329 PRRX; paired mesoderm homeobox protein 
K09329 PRRX; paired mesoderm homeobox protein 
K09329 PRRX; paired mesoderm homeobox protein 
K09329 PRRX; paired mesoderm homeobox protein 
K09330 PHOX2; paired mesoderm homeobox protein 2 
K09330 PHOX2; paired mesoderm homeobox protein 2 
K09330 PHOX2; paired mesoderm homeobox protein 2 
K09330 PHOX2; paired mesoderm homeobox protein 2 
K09331 SHOX; short stature homeobox protein 
K09331 SHOX; short stature homeobox protein 
K09331 SHOX; short stature homeobox protein 
K09331 SHOX; short stature homeobox protein 
K09332 RAX; retina and anterior neural fold homeobox protein 
K09332 RAX; retina and anterior neural fold homeobox protein 
K09332 RAX; retina and anterior neural fold homeobox protein 
K09332 RAX; retina and anterior neural fold homeobox protein 
K09334 ALX1; ALX homeobox protein 1 
K09334 ALX1; ALX homeobox protein 1 
K09335 VSX1; visual system homeobox protein 1 
K09335 VSX1; visual system homeobox protein 1 
K09336 VSX2; visual system homeobox protein 2 
K09336 VSX2; visual system homeobox protein 2 
K09337 CRX; cone-rod homeobox protein 
K09337 CRX; cone-rod homeobox protein 
K24199 NOBOX; homeobox protein NOBOX 
K09356 PITX1; paired-like homeodomain transcription factor 1 
K04686 PITX2; paired-like homeodomain transcription factor 2 
K04686 PITX2; paired-like homeodomain transcription factor 2 
K09357 PITX3; paired-like homeodomain transcription factor 3 
K09357 PITX3; paired-like homeodomain transcription factor 3 
K09354 HESX1; homeobox protein expressed in ES cells 1 
K09354 HESX1; homeobox protein expressed in ES cells 1 
K24893 DMBX1; diencephalon/mesencephalon homeobox protein 1 
K24895 DRGX; dorsal root ganglia homeobox protein 
K24897 HOPX; homeodomain-only protein 
K24897 HOPX; homeodomain-only protein 
K24900 MIXL1; homeobox protein MIXL1 
K24900 MIXL1; homeobox protein MIXL1 
K24900 MIXL1; homeobox protein MIXL1 
K24901 OTP; homeobox protein orthopedia 
K24901 OTP; homeobox protein orthopedia 
K24904 SEBOX; homeobox protein SEBOX 
K09382 PAX1_9; paired box protein 1/9 
K09382 PAX1_9; paired box protein 1/9 
K09382 PAX1_9; paired box protein 1/9 
K15608 PAX2; paired box protein 2 
K15608 PAX2; paired box protein 2 
K09381 PAX3_7; paired box protein 3/7 
K09381 PAX3_7; paired box protein 3/7 
K09381 PAX3_7; paired box protein 3/7 
K09381 PAX3_7; paired box protein 3/7 
K08032 PAX4; paired box protein 4 
K09383 PAX5; paired box protein 5 
K09383 PAX5; paired box protein 5 
K08031 PAX6; paired box protein 6 
K08031 PAX6; paired box protein 6 
K08031 PAX6; paired box protein 6 
K08031 PAX6; paired box protein 6 
K09293 PAX8; paired box protein 8 
K09293 PAX8; paired box protein 8 

     Homeo domain LIM

     Homeo domain POU

     Homeo domain SINE

     Homeo domain ZF

     Homeo domain CUT

     Homeo domain PROS

     Homeo domain TALE

     Homeo domain other

     Fork head/winged helix developmental regulators

     Fork head/winged helix tissue-specific regulators

     Fork head/winged helix cell cycle-controlling factors, E2F

     Fork head/winged helix cell cycle-controlling factors, DP

     Fork head/winged helix other regulators

     Heat shock factors

     Tryptophan clusters Myb, Myb-factors

     Tryptophan clusters Myb, Myb-like factors

     Tryptophan clusters Ets-type

     Tryptophan clusters interferon-regulating factors

     TEA domain

     ARID

   beta-Scaffold factors with minor groove contacts

   Other transcription factors

 





 Prokaryotic type













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Last updated: April 5, 2024
Classification taken and modified from TRANSFAC 7.0