09100 Metabolism
09120 Genetic Information Processing
09130 Environmental Information Processing
09140 Cellular Processes
09150 Organismal Systems
09160 Human Diseases
09180 Brite Hierarchies
09181 Protein families: metabolism
09182 Protein families: genetic information processing
03000 Transcription factors [BR:yep03000]
03021 Transcription machinery [BR:yep03021]
03019 Messenger RNA biogenesis [BR:yep03019]
03041 Spliceosome
03011 Ribosome [BR:yep03011]
03009 Ribosome biogenesis [BR:yep03009]
03016 Transfer RNA biogenesis [BR:yep03016]
YE105_C3374 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase YE105_C2895 glutamyl-tRNA synthetase YE105_C0996 prolyl-tRNA synthetase YE105_C0621 isoleucyl-tRNA synthetase YE105_C1241 leucyl-tRNA synthetase YE105_C1493 methionyl-tRNA synthetase YE105_C1260 glutaminyl-tRNA synthetase YE105_C2325 arginyl-tRNA synthetase YE105_C0888 lysyl-tRNA synthetase YE105_C1892 aspartyl-tRNA synthetase YE105_C0680 alanyl-tRNA synthetase YE105_C2562 asparaginyl-tRNA synthetase YE105_C1989 threonyl-tRNA synthetase YE105_C2595 seryl-tRNA synthetase YE105_C1203 cysteinyl-tRNA synthetase YE105_C0510 valyl-tRNA synthetase YE105_C3015 histidyl-tRNA synthetase YE105_C1993 phenylalanyl-tRNA synthetase subunit alpha YE105_C1994 phenylalanyl-tRNA synthetase subunit beta YE105_C2053 tyrosyl-tRNA synthetase YE105_C3684 tryptophanyl-tRNA synthetase YE105_C0035 D-tyrosyl-tRNA(Tyr) deacylase YE105_C2469 purine nucleoside phosphoramidase YE105_C3200 tRNA (guanine-N(7)-)-methyltransferase YE105_C0997 hypothetical protein YE105_C2797 tRNA pseudouridine synthase A YE105_C0457 tRNA pseudouridine synthase B YE105_C0739 tRNA pseudouridine synthase D YE105_C3035 cysteine desulfurase YE105_C3603 putative ribosome maturation factor YE105_C0397 tRNA delta(2)-isopentenylpyrophosphate transferase YE105_C3906 tRNA modification GTPase TrmE YE105_C3939 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA YE105_C2296 selenophosphate synthetase YE105_C0420 adenosine-3'(2'),5'-bisphosphate nucleotidase YE105_C2038 ribonuclease T YE105_C0057 ribonuclease PH YE105_C2225 exoribonuclease II YE105_C1917 ribonuclease D YE105_C0841 putative 2'-5' RNA ligase YE105_C0595 putative ABC transporter ATP-binding protein YE105_C3879 glycyl-tRNA synthetase subunit alpha YE105_C3878 glycyl-tRNA synthetase subunit beta YE105_C0838 glutamyl-Q tRNA(Asp) synthetase YE105_C1188 hypothetical protein YE105_C3060 tRNA-specific adenosine deaminase YE105_C3570 tRNA-dihydrouridine synthase A YE105_C3538 tRNA-dihydrouridine synthase B YE105_C1391 tRNA-dihydrouridine synthase C YE105_C1252 putative tRNA-thiotransferase YE105_C1888 hypothetical protein YE105_C1887 hypothetical protein YE105_C2572 putative metallothionein SmtA YE105_C0136 tRNA (uracil-5-)-methyltransferase YE105_C0669 tRNA (guanine-N(1)-)-methyltransferase YE105_C1008 putative methyltransferase YE105_C0045 tRNA guanosine-2'-O-methyltransferase YE105_C3037 SpoU family rRNA methylase YE105_C0084 putative methyltransferase YE105_C3080 hypothetical protein YE105_C0964 tRNA pseudouridine synthase C YE105_C1644 putative ribosomal large subunit pseudouridine synthase YE105_C0639 ribosomal large subunit pseudouridine synthase A YE105_C2448 tRNA-specific 2-thiouridylase MnmA YE105_C2084 C32 tRNA thiolase YE105_C0216 sulfur transfer protein SirA YE105_C3647 sulfur transfer complex subunit TusB YE105_C3648 sulfur relay protein TusC YE105_C3649 sulfur transfer complex subunit TusD YE105_C2531 putative sulfite reductase subunit protein YE105_C3033 iron-sulfur cluster assembly protein YE105_C0877 putative global regulator YE105_C2820 5-methylaminomethyl-2-thiouridine methyltransferase YE105_C1095 S-adenosylmethionine:tRNA ribosyltransferase-isomerase YE105_C1134 queuosine biosynthesis protein QueC YE105_C0754 putative 6-pyruvoyl tetrahydrobiopterin synthase family protein YE105_C0757 hypothetical protein YE105_C0961 7-cyano-7-deazaguanine reductase YE105_C0393 putative iron-sulfur cluster-binding protein YE105_C1097 queuine tRNA-ribosyltransferase YE105_C1112 thiamine biosynthesis protein ThiI YE105_C0989 tRNA(Ile)-lysidine synthetase YE105_C2953 putative acetyltransferase YE105_C1914 hypothetical protein YE105_C3378 putative DNA-binding/iron metalloprotein/AP endonuclease YE105_C0394 putative ATPase YE105_C0952 hypothetical protein YE105_C0405 exoribonuclease R YE105_C0459 polynucleotide phosphorylase/polyadenylase YE105_C3869 PIN-domain containing protein
K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] K04487 iscS; cysteine desulfurase [EC:2.8.1.7] K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme K01008 selD; selenide, water dikinase [EC:2.7.9.3] K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] K03683 rnt; ribonuclease T [EC:3.1.13.-] K00989 rph; ribonuclease PH [EC:2.7.7.56] K01147 rnb; exoribonuclease II [EC:3.1.13.1] K03684 rnd; ribonuclease D [EC:3.1.13.5] K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] K06020 ettA; energy-dependent translational throttle protein EttA K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-] K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] K07237 tusB; tRNA 2-thiouridine synthesizing protein B K07236 tusC; tRNA 2-thiouridine synthesizing protein C K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] K13628 iscA; iron-sulfur cluster assembly protein K06980 ygfZ; tRNA-modifying protein YgfZ K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase K12573 rnr; ribonuclease R [EC:3.1.13.1] K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
03012 Translation factors [BR:yep03012]
03110 Chaperones and folding catalysts [BR:yep03110]
04131 Membrane trafficking [BR:yep04131]
04121 Ubiquitin system [BR:yep04121]
03051 Proteasome [BR:yep03051]
03032 DNA replication proteins [BR:yep03032]
03036 Chromosome and associated proteins [BR:yep03036]
03400 DNA repair and recombination proteins [BR:yep03400]
03029 Mitochondrial biogenesis [BR:yep03029]
09183 Protein families: signaling and cellular processes
09185 Viral protein families
09184 RNA family
09190 Not Included in Pathway or Brite