Transfer RNA Biogenesis - Yersinia pestis KIM10+ (biovar Mediaevalis)

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 Eukaryotic type
   5'processing factors
   3'processing and CCA adding factors
   tRNA spricing factors
   tRNA transport factors
   Aminoacyl-tRNA synthetases (AARSs)
   tRNA modification factors
     Deaminases
     Dihydorouridine synthases
     Methylthiotransferase
     Methyltransferases
     Psudouridine synthases
     Thiolation factors
     KEOPS/EKC complex
     Elongator complex
     Elongator related proteins
     Other tRNA modification factors
       y4027 hypothetical protein
       y0629 miaA; delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase
       y4118 thdF; GTP-binding protein
       y4144 gidA; glucose-inhibited division protein
       y2157 selD; selenophosphate synthase
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] 
K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] 
K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] 
K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme 
K01008 selD; selenide, water dikinase [EC:2.7.9.3] 
   tRNA degradation factors
 
 Prokaryotic type
   5'processing factors
   3'processing and CCA adding factors
   tRNA spricing factors
   tRNA transport factors
   Aminoacyl-tRNA synthetases (AARSs)
   tRNA modification factors
     Deaminases
     Dihydorouridine synthases
     Methylthiotransferases
     Methyltransferases
     Psudouridine synthases
     Thiolation factors
     KEOPS/EKC complex
     Other tRNA modification factors
       y4144 gidA; glucose-inhibited division protein
       y0629 miaA; delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase
       y1590 putative peptidase
       y0990 queA; probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase
       y1034 hypothetical protein
       y0817 putative 6-pyruvoyl tetrahydrobiopterin synthase
       y0816 hypothetical protein
       y3147 hypothetical protein
       y0624 hypothetical protein
       y2157 selD; selenophosphate synthase
       y0991 tgt; tRNA-guanine transglycosylase
       y1012 putative oxidoreductase
       y3117 mesJ; cell cycle protein
       y1424 hypothetical protein
       y2238 hypothetical protein
       y4027 hypothetical protein
       y3534 putative O-sialoglycoprotein endopeptidase
       y0626 hypothetical protein
       y3158 putative enzyme
K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme 
K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] 
K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] 
K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] 
K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] 
K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] 
K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] 
K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] 
K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] 
K01008 selD; selenide, water dikinase [EC:2.7.9.3] 
K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] 
K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] 
K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] 
K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] 
K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB 
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] 
K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] 
K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE 
K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase 
   tRNA degradation factors

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Last updated: February 29, 2024