| T01042 | mbr | Monosiga brevicollis |
| T04136 | sre | Salpingoeca rosetta |
| T00245 | ddi | Dictyostelium discoideum (cellular slime mold) |
| T02090 | dpp | Dictyostelium purpureum (cellular slime mold) |
| T02668 | dfa | Cavenderia fasciculata (cellular slime mold) |
| T00238 | ehi | Entamoeba histolytica |
| T01083 | edi | Entamoeba dispar |
| T04133 | eiv | Entamoeba invadens |
| T02667 | acan | Acanthamoeba castellanii |
| T00095 | pfa | Plasmodium falciparum 3D7 |
| T01051 | pfd | Plasmodium falciparum Dd2 |
| T01052 | pfh | Plasmodium falciparum HB3 |
| T08079 | prei | Plasmodium reichenowi |
| T08136 | pgab | Plasmodium gaboni |
| T10353 | plag | Plasmodium sp. gorilla clade G2 |
| T01035 | pyo | Plasmodium yoelii |
| T01108 | pcb | Plasmodium chabaudi |
| T01111 | pbe | Plasmodium berghei |
| T08061 | pvv | Plasmodium vinckei vinckei |
| T01094 | pkn | Plasmodium knowlesi |
| T01073 | pvx | Plasmodium vivax |
| T02490 | pcy | Plasmodium cynomolgi |
| T09444 | pmal | Plasmodium malariae |
| T10352 | pbrs | Plasmodium brasilianum |
| T09405 | prel | Plasmodium relictum |
| T10133 | pcot | Plasmodium coatneyi |
| T00253 | tan | Theileria annulata |
| T00254 | tpv | Theileria parva |
| T03460 | tot | Theileria orientalis |
| T02820 | beq | Theileria equi |
| T01085 | bbo | Babesia bovis |
| T05554 | bmic | Babesia microti |
| T08062 | bbig | Babesia bigemina |
| T10391 | bdw | Babesia duncani |
| T00168 | cpv | Cryptosporidium parvum |
| T00210 | cho | Cryptosporidium hominis |
| T01093 | tgo | Toxoplasma gondii |
| T10139 | bbes | Besnoitia besnoiti |
| T01020 | tet | Tetrahymena thermophila |
| T01055 | ptm | Paramecium tetraurelia |
| T01075 | pti | Phaeodactylum tricornutum |
| T04784 | fcy | Fragilariopsis cylindrus |
| T01078 | tps | Thalassiosira pseudonana |
| T02917 | ngd | Nannochloropsis gaditana |
| T04134 | aaf | Aureococcus anophagefferens |
| T01333 | pif | Phytophthora infestans |
| T03459 | psoj | Phytophthora sojae |
| T10371 | blac | Bremia lactucae (lettuce downy mildew) |
| T04137 | spar | Saprolegnia parasitica |
| T02915 | ehx | Emiliania huxleyi |
| T02925 | gtt | Guillardia theta |
| T01013 | tbr | Trypanosoma brucei brucei |
| T06526 | tbg | Trypanosoma brucei gambiense |
| T01012 | tcr | Trypanosoma cruzi |
| T01014 | lma | Leishmania major |
| T01112 | lif | Leishmania infantum |
| T02289 | ldo | Leishmania donovani |
| T02288 | lmi | Leishmania mexicana |
| T10333 | lmat | Leishmania martiniquensis |
| T01113 | lbz | Leishmania braziliensis |
| T06539 | lpan | Leishmania panamensis |
| T10351 | loi | Leishmania orientalis |
| T10390 | leis | Leishmania sp. Ghana 2012 LV757 |
| T10389 | lenr | Leishmania enriettii |
| T10410 | lein | Leishmania sp. Namibia |
| T10408 | phet | Porcisia hertigi |
| T01241 | ngr | Naegleria gruberi |
| T01022 | tva | Trichomonas vaginalis |
| T01047 | gla | Giardia lamblia |
Organism group: Protists