| T00035 | pae | Pseudomonas aeruginosa PAO1 |
| T03097 | paev | Pseudomonas aeruginosa PAO1-VE13 |
| T03170 | paei | Pseudomonas aeruginosa PAO1-VE2 |
| T00401 | pau | Pseudomonas aeruginosa UCBPP-PA14 |
| T00569 | pap | Pseudomonas aeruginosa PA7 |
| T00818 | pag | Pseudomonas aeruginosa LESB58 |
| T01973 | paf | Pseudomonas aeruginosa M18 |
| T01974 | pnc | Pseudomonas aeruginosa NCGM2.S1 |
| T03789 | paeb | Pseudomonas aeruginosa NCGM 1900 |
| T02161 | pdk | Pseudomonas aeruginosa DK2 |
| T02627 | psg | Pseudomonas aeruginosa B136-33 |
| T02711 | prp | Pseudomonas aeruginosa RP73 |
| T02928 | paep | Pseudomonas aeruginosa PA1 |
| T02929 | paer | Pseudomonas aeruginosa PA1R |
| T02951 | paem | Pseudomonas aeruginosa MTB-1 |
| T02970 | pael | Pseudomonas aeruginosa LES431 |
| T02971 | paes | Pseudomonas aeruginosa SCV20265 |
| T03031 | paeu | Pseudomonas aeruginosa PA38182 |
| T03035 | paeg | Pseudomonas aeruginosa YL84 |
| T03098 | paec | Pseudomonas aeruginosa c7447m |
| T03171 | paeo | Pseudomonas aeruginosa PAO581 |
| T00510 | pmy | Pseudomonas mendocina ymp |
| T01473 | pmk | Pseudomonas mendocina NK-01 |
| T02708 | pre | Pseudomonas resinovorans |
| T03772 | ppse | Pseudomonas pseudoalcaligenes |
| T04318 | palc | Pseudomonas alcaligenes |
| T04637 | pcq | Pseudomonas citronellolis |
| T00114 | ppu | Pseudomonas putida KT2440 |
| T00537 | ppf | Pseudomonas putida F1 |
| T00650 | ppg | Pseudomonas putida GB-1 |
| T00675 | ppw | Pseudomonas putida W619 |
| T01570 | ppt | Pseudomonas putida S16 |
| T01975 | ppb | Pseudomonas putida BIRD-1 |
| T02170 | ppi | Pseudomonas putida ND6 |
| T02181 | ppx | Pseudomonas putida DOT-T1E |
| T02389 | ppuh | Pseudomonas putida HB3267 |
| T02706 | pput | Pseudomonas putida H8234 |
| T02707 | ppun | Pseudomonas putida NBRC 14164 |
| T03439 | ppud | Pseudomonas putida DLL-E4 |
| T01501 | pfv | Pseudomonas fulva |
| T02972 | pmon | Pseudomonas monteilii SB3078 |
| T02973 | pmot | Pseudomonas monteilii SB3101 |
| T03276 | pmos | Pseudomonas soli |
| T03646 | ppj | Pseudomonas plecoglossicida |
| T04267 | por | Pseudomonas oryzihabitans |
| T00118 | pst | Pseudomonas syringae pv. tomato DC3000 |
| T00246 | psb | Pseudomonas syringae pv. syringae B728a |
| T03014 | psyr | Pseudomonas syringae CC1557 |
| T00266 | psp | Pseudomonas savastanoi pv. phaseolicola 1448A |
| T05354 | pamg | Pseudomonas amygdali |
| T03002 | pci | Pseudomonas cichorii |
| T05369 | pavl | Pseudomonas avellanae |
| T06554 | pvd | Pseudomonas viridiflava |
| T00249 | pfl | Pseudomonas protegens Pf-5 |
| T02671 | pprc | Pseudomonas protegens CHA0 |
| T03613 | ppro | Pseudomonas protegens Cab57 |
| T00283 | pfo | Pseudomonas fluorescens Pf0-1 |
| T00899 | pfs | Pseudomonas fluorescens SBW25 |
| T01734 | pfe | Pseudomonas fluorescens F113 |
| T02114 | pfc | Pseudomonas fluorescens A506 |
| T03319 | pfn | Pseudomonas fluorescens UK4 |
| T02456 | ppz | Pseudomonas poae |
| T03769 | pfb | Pseudomonas synxantha LBUM223 |
| T03626 | pman | Pseudomonas mandelii |
| T04006 | ptv | Pseudomonas trivialis |
| T04842 | pcg | Pseudomonas corrugata |
| T04853 | pvr | Pseudomonas veronii |
| T04879 | pazo | Pseudomonas azotoformans |
| T05323 | poi | Pseudomonas orientalis |
| T03766 | pfw | Pseudomonas simiae PCL1751 |
| T03767 | pff | Pseudomonas simiae PICF7 |
| T04730 | pfx | Pseudomonas lurida |
| T00362 | pen | Pseudomonas entomophila |
| T00511 | psa | Pseudomonas stutzeri A1501 |
| T01571 | psz | Pseudomonas stutzeri ATCC 17588 |
| T01976 | psr | Pseudomonas stutzeri DSM 4166 |
| T02168 | psc | Pseudomonas stutzeri CCUG 29243 |
| T02182 | psj | Pseudomonas stutzeri DSM 10701 |
| T02391 | psh | Pseudomonas stutzeri RCH2 |
| T03366 | pstu | Pseudomonas stutzeri 19SMN4 |
| T03390 | pstt | Pseudomonas stutzeri 28a24 |
| T03573 | pbm | Pseudomonas balearica |
| T06601 | plul | Pseudomonas luteola |
| T01472 | pba | Pseudomonas brassicacearum subsp. brassicacearum NFM421 |
| T03174 | pbc | Pseudomonas brassicacearum DF41 |
| T02357 | ppuu | Pseudomonas sp. UW4 |
| T02524 | pdr | Pseudomonas sp. ATCC 13867 |
| T02897 | psv | Pseudomonas sp. VLB120 |
| T02969 | psk | Pseudomonas sp. TKP |
| T03081 | pkc | Pseudomonas knackmussii |
| T03201 | pch | Pseudomonas chlororaphis PA23 |
| T03768 | pcz | Pseudomonas chlororaphis PCL1606 |
| T03338 | pcp | Pseudomonas chlororaphis subsp. aurantiaca |
| T04285 | pfz | Pseudomonas fragi |
| T05473 | plq | Pseudomonas lundensis |
| T03238 | palk | Pseudomonas alkylphenolica |
| T03339 | prh | Pseudomonas rhizosphaerae |
| T03354 | psw | Pseudomonas cremoricolorata |
| T03520 | ppv | Pseudomonas parafulva |
| T03623 | pses | Pseudomonas sp. StFLB209 |
| T03702 | psem | Pseudomonas sp. MRSN12121 |
| T03967 | psec | Pseudomonas sp. CCOS 191 |
| T04081 | ppsy | Pseudomonas versuta |
| T04177 | psos | Pseudomonas sp. Os17 |
| T04647 | pkr | Pseudomonas koreensis |
| T04786 | pfk | Pseudomonas frederiksbergensis |
| T04830 | panr | Pseudomonas antarctica |
| T05074 | ppsl | Pseudomonas psychrotolerans |
| T05373 | pset | Pseudomonas sp. TCU-HL1 |
| T05412 | psil | Pseudomonas silesiensis |
| T05821 | pym | Pseudomonas yamanorum |
| T05857 | pade | Candidatus Pseudomonas adelgestsugas (Adelges tsugae) |
| T05921 | psed | Pseudomonas sp. R2A2 |
| T06348 | pke | Pseudomonas kribbensis |
Pangenome: Pseudomonas