KEGG Modules

Carbohydrate metabolism
Central carbohydrate metabolism
M00002 Glycolysis, core module involving three-carbon compounds [PATH:bov00010 bov01200 bov01230 bov01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:bov00010 bov00020 bov00620 bov00785 bov01200 bov01210 bov01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH:bov00020 bov01200 bov01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:bov00020 bov01200 bov01210 bov01230 bov01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:bov00020 bov01200 bov01210 bov01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH:bov00030 bov01200 bov01100 bov01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:bov00030 bov01200 bov01100 bov01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:bov00030 bov01200 bov01230 bov01100 bov01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH:bov00030 bov00230 bov01200 bov01230 bov01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:bov00030 bov01200 bov01100 bov01120]

Other carbohydrate metabolism
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:bov00520 bov01250 bov01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:bov00520 bov01250 bov01100]
M00012 Glyoxylate cycle [PATH:bov00630 bov01200 bov01100 bov01110]

Energy metabolism
Carbon fixation
M00169 CAM (Crassulacean acid metabolism), light [PATH:bov00620 bov00710 bov01200 bov01100 bov01120]

Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
M00144 NADH:quinone oxidoreductase, prokaryotes [PATH:bov00190 bov01100]
M00149 Succinate dehydrogenase, prokaryotes [PATH:bov00190 bov01100]
M00151 Cytochrome bc1 complex respiratory unit [PATH:bov00190 bov01100]
M00153 Cytochrome bd ubiquinol oxidase [PATH:bov00190]
M00417 Cytochrome o ubiquinol oxidase [PATH:bov00190 bov01100]
M00156 Cytochrome c oxidase, cbb3-type [PATH:bov00190 bov01100]
M00157 F-type ATPase, prokaryotes and chloroplasts [PATH:bov00190 bov01100]

Lipid metabolism
Fatty acid metabolism
M00082 Fatty acid biosynthesis, initiation [PATH:bov00061 bov01212 bov01100]
M00083 Fatty acid biosynthesis, elongation [PATH:bov00061 bov01212 bov01100]
M00086 beta-Oxidation, acyl-CoA synthesis [PATH:bov00061 bov00071 bov01212 bov01100]

Sterol biosynthesis
Lipid metabolism
M00091 Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:bov00564 bov01100]
M00093 Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:bov00564 bov01100]

Nucleotide metabolism
Purine metabolism
M00048 De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:bov00230 bov01100]
M00049 Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:bov00230 bov01232 bov01240 bov01100]
M00050 Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:bov00230 bov01232 bov01100]
M00053 Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:bov00230 bov00240 bov01232 bov01100]

Pyrimidine metabolism
M00052 Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:bov00240 bov01232 bov01240 bov01100]
M00938 Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:bov00240 bov01232 bov01100]
M00046 Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:bov00240 bov00410 bov00770 bov01100]

Amino acid metabolism
Serine and threonine metabolism
M00020 Serine biosynthesis, glycerate-3P => serine [PATH:bov00260 bov00680 bov01200 bov01230 bov01100]
M00018 Threonine biosynthesis, aspartate => homoserine => threonine [PATH:bov00260 bov01230 bov01100 bov01110]
M00621 Glycine cleavage system [PATH:bov00260 bov00630 bov00670 bov00785 bov01200 bov01100]
M00555 Betaine biosynthesis, choline => betaine [PATH:bov00260 bov00670 bov01100]

Cysteine and methionine metabolism
M00021 Cysteine biosynthesis, serine => cysteine [PATH:bov00270 bov00920 bov01200 bov01230 bov01100 bov01110]

Branched-chain amino acid metabolism
M00019 Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:bov00290 bov00770 bov01210 bov01230 bov01100 bov01110]
M00432 Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:bov00290 bov01210 bov01230 bov01100 bov01110]
M00036 Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:bov00280 bov01100]

Lysine metabolism
M00016 Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:bov00300 bov01230 bov01100]

Arginine and proline metabolism
M00028 Ornithine biosynthesis, glutamate => ornithine [PATH:bov00220 bov01210 bov01230 bov01100]
M00844 Arginine biosynthesis, ornithine => arginine [PATH:bov00220 bov01230 bov01100]
M00015 Proline biosynthesis, glutamate => proline [PATH:bov00330 bov01230 bov01100]

Polyamine biosynthesis
M00134 Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:bov00330 bov01100]

Histidine metabolism
M00026 Histidine biosynthesis, PRPP => histidine [PATH:bov00340 bov01230 bov01100 bov01110]
M00045 Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:bov00340 bov01100]

Aromatic amino acid metabolism
M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:bov00400 bov01230 bov01100 bov01110]
M00023 Tryptophan biosynthesis, chorismate => tryptophan [PATH:bov00400 bov01230 bov01100 bov01110]

Other amino acid metabolism
M00027 GABA (gamma-Aminobutyrate) shunt [PATH:bov00250 bov00650 bov01100]
M00118 Glutathione biosynthesis, glutamate => glutathione [PATH:bov00480 bov01240 bov01100]

Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Other polysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:bov00770 bov01240 bov01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:bov00780 bov01240 bov01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:bov00785 bov01240 bov01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:bov00790 bov00670 bov01240 bov01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:bov00790 bov01240 bov01100]
M00988 PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine [PATH:bov00790 bov01100]

Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Aromatics degradation

Gene set
Pathogenicity
Drug resistance
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity