KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: cfa00010 cfa01200 cfa01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: cfa00010 cfa01200 cfa01230 cfa01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: cfa00010 cfa00020 cfa01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: cfa00010 cfa00020 cfa00620 cfa00785 cfa01200 cfa01210 cfa01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: cfa00020 cfa01200 cfa01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: cfa00020 cfa01200 cfa01210 cfa01230 cfa01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: cfa00020 cfa01200 cfa01210 cfa01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: cfa00030 cfa01200 cfa01100]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: cfa00030 cfa01200 cfa01100]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: cfa00030 cfa01200 cfa01230 cfa01100]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: cfa00030 cfa00230 cfa01200 cfa01230 cfa01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: cfa00030 cfa01200 cfa01100]
Other carbohydrate metabolism
M00014 Glucuronate pathway (uronate pathway) [PATH: cfa00040 cfa01100]
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH: cfa00040 cfa00030 cfa01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH: cfa00040 cfa00030 cfa01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH: cfa00052 cfa01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH: cfa00052 cfa01100]
M00129 Ascorbate biosynthesis, animals, glucose-1P => ascorbate [PATH: cfa00040 cfa00053 cfa01240 cfa01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH: cfa00053 cfa01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH: cfa00500 cfa01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH: cfa00500 cfa01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH: cfa00520 cfa01250 cfa01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH: cfa00520 cfa00052 cfa01250 cfa01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH: cfa00520 cfa01250 cfa01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH: cfa00520 cfa01250 cfa01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH: cfa00520 cfa01100]
M00012 Glyoxylate cycle [PATH: cfa00630 cfa01200 cfa01100]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH: cfa00280 cfa00630 cfa00640 cfa01200 cfa01100]
M00130 Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4 [PATH: cfa00562 cfa01100]
M00131 Inositol phosphate metabolism, Ins(1,3,4,5)P4 => Ins(1,3,4)P3 => myo-inositol [PATH: cfa00562 cfa01100]
M00132 Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH: cfa00562 cfa01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH: cfa00400 cfa01230 cfa01100]
M00023 Tryptophan biosynthesis, chorismate => tryptophan [PATH: cfa00400 cfa01230 cfa01100]
M00024 Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH: cfa00400 cfa01230 cfa01100]
M00025 Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH: cfa00400 cfa01230 cfa01100]
M00042 Catecholamine biosynthesis, tyrosine => dopamine => noradrenaline => adrenaline [PATH: cfa00350 cfa01100]
M00043 Thyroid hormone biosynthesis, tyrosine => triiodothyronine/thyroxine [PATH: cfa00350 cfa01100]
M00044 Tyrosine degradation, tyrosine => homogentisate [PATH: cfa00350 cfa01100]
M00037 Melatonin biosynthesis, animals, tryptophan => serotonin => melatonin [PATH: cfa00380 cfa01100]
M00038 Tryptophan metabolism, tryptophan => kynurenine => 2-aminomuconate [PATH: cfa00380 cfa01100]
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
M00055 N-glycan precursor biosynthesis [PATH: cfa00510 cfa01100]
M00073 N-glycan precursor trimming [PATH: cfa00510 cfa01100]
M00075 N-glycan biosynthesis, complex type [PATH: cfa00510 cfa01100]
M00056 O-glycan biosynthesis, mucin type core [PATH: cfa00512 cfa01100]
M00872 O-glycan biosynthesis, mannose type (core M3) [PATH: cfa00515 cfa01100]
M00065 GPI-anchor biosynthesis, core oligosaccharide [PATH: cfa00563 cfa01100]
M00070 Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer [PATH: cfa00601 cfa01100]
M00071 Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer [PATH: cfa00601 cfa01100]
M00068 Glycosphingolipid biosynthesis, globo-series, LacCer => Gb4Cer [PATH: cfa00603 cfa01100]
M00069 Glycosphingolipid biosynthesis, ganglio series, LacCer => GT3 [PATH: cfa00604 cfa01100]
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: cfa00730 cfa01240 cfa01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: cfa00730 cfa01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: cfa00740 cfa01240 cfa01100]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: cfa00750 cfa01240 cfa01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: cfa00760 cfa01240 cfa01100]
M00912 NAD biosynthesis, tryptophan => quinolinate => NAD [PATH: cfa00380 cfa00760 cfa01240 cfa01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: cfa00770 cfa01240 cfa01100]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: cfa00770 cfa01240 cfa01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: cfa00780 cfa01240 cfa01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: cfa00780 cfa01240 cfa01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: cfa00785 cfa01240 cfa01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH: cfa00785 cfa01240 cfa01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH: cfa00785 cfa01240 cfa01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: cfa00790 cfa00670 cfa01240 cfa01100]
M00842 Tetrahydrobiopterin biosynthesis, GTP => BH4 [PATH: cfa00790 cfa01240 cfa01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: cfa00790 cfa01240 cfa01100]
M00140 C1-unit interconversion, prokaryotes [PATH: cfa00670 cfa01240 cfa01100]
M00141 C1-unit interconversion, eukaryotes [PATH: cfa00670 cfa01240 cfa01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: cfa00860 cfa01240 cfa01100]
M00868 Heme biosynthesis, animals and fungi, glycine => heme [PATH: cfa00860 cfa01240 cfa01100]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: cfa00860 cfa01240 cfa01100]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH: cfa00860 cfa01240 cfa01100]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: cfa00860 cfa01240 cfa01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: cfa00860 cfa01240 cfa01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: cfa00130 cfa01240 cfa01100]
M00128 Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinol [PATH: cfa00130 cfa01240 cfa01100]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: cfa00130 cfa01240 cfa01100]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Aromatics degradation
M00551 Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:cfa01100]
M00568 Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:cfa01100]
Signature modules
Gene set
Pathogenicity
Drug resistance
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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